Yeast homologue of neuronal frequenin is a regulator of phosphatidylinosrtol-4-OH kinase

Nature Cell Biology

Volumn 1, Issue 4, 1999, Pages 234-241

  Hendricks, Kristin B ^a   Wang, Bo Qing ^a   Schnieders, Elisabeth A ^a,b   Thorner, Jeremy ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b Acacia Biosciences Inc   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

METAZOA;

CALCIUM BINDING PROTEIN; FRQ1 PROTEIN, S CEREVISIAE; FUNGAL PROTEIN; NERVE PROTEIN; PHOSPHATIDYLINOSITOL 4 KINASE, S CEREVISIAE; PHOSPHATIDYLINOSITOL 4-KINASE, S CEREVISIAE; PHOSPHATIDYLINOSITOL KINASE; SACCHAROMYCES CEREVISIAE PROTEIN;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; BINDING SITE; ENZYME ACTIVATION; FUNGAL GENE; GENETICS; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; SACCHAROMYCES CEREVISIAE; SEQUENCE HOMOLOGY;

1-PHOSPHATIDYLINOSITOL 4-KINASE; AMINO ACID SEQUENCE; ANIMALS; BINDING SITES; CALCIUM-BINDING PROTEINS; CONSERVED SEQUENCE; ENZYME ACTIVATION; FUNGAL PROTEINS; GENES, FUNGAL; MOLECULAR SEQUENCE DATA; NERVE TISSUE PROTEINS; SACCHAROMYCES CEREVISIAE; SACCHAROMYCES CEREVISIAE PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID;

EID: 0033175467     PISSN: 14657392     EISSN: None     Source Type: Journal    
DOI: 10.1038/12058     Document Type: Article

References (55)

1. Soderling, T. R. Calcium-dependent protein kinases in learning and memory. Adv. Second Messen. Phosphoprot. Res. 30, 175-189 (1995).
2. Goda, Y. & Sudhof, T. C. Calcium regulation of neurotransmitter release: reliably unreliable? Curr. Opin. Cell Biol. 9, 513-518 (1997).
3. Janmey, P. A. The cytoskeleton and cell signaling: component localization and mechanical coupling. Physiol. Rev. 78, 763-781 (1998).
4. 2+-dependent regulation in neuronal gene expression. Curr. Opin. Neurobiol. 7, 419-429 (1997).
5. Ikura, M. Calcium binding and conformational response in EF-hand proteins. Trends Biochem. Sci. 21, 14-17 (1996).
6. Flaherty, K. M., Zozulya, S., Stryer, L. & McKay, D. B. Three-dimensional structure of recoverin, a calcium sensor in vision. Cell 75, 709-716 (1993).
7. Yamagata, K., Goto, K., Kuo, C. H., Kondo, H. & Miki, N. Visinin: a novel calcium binding protein expressed in retinal cone cells. Neuron 4, 469-476 (1990).
8. Lenz, S. E., Henschel, Y., Zopf, D., Voss, B. & Gundelfinger, E. D. VILIP, a cognate protein of the retinal calcium binding proteins, visinin and recoverin, is expressed in the developing chicken brain. Mol. Brain Res. 15, 133-140 (1992).
9. Okazaki, K. et al. Full sequence of neurocalcin, a novel calcium-binding protein abundant in central nervous system. Biochem. Biophys. Res. Commun. 185, 147-153 (1992).
10. Kobayashi, M., Takamatsu, K., Saitoh, S., Miura, M. & Noguchi, T. Molecular cloning of hippocalcin, a novel calcium-binding protein of the recoverin family exclusively expressed Ln hippocampus. Biochem. Biophys. Res. Commun. 189, 511-517 (1992).
11. Pongs, O. et al. Frequenin - a novel calcium-binding protein that modulates synaptic efficacy in the Drosophila nervous system. Neuron 11, 15-28 (1993).
12. Detwiler, P. B. & Gray-Keller, M. P. The mechanisms of vertebrate light adaptation: speeded recovery versus slowed activation. Curr. Opin. Neurobiol. 6, 440-444 (1996).
13. 2+-binding proteins in the retina. Trends Neurosci. 19, 547-554 (1996).
14. Ames, J. B. et al. Molecular mechanics of calcium-myristoyl switches. Nature 389, 198-202 (1997).
15. Johnson, D. R., Bhatnagar, R. S., Knoll, L. J. & Gordon, J. I. Genetic and biochemical studies of protein N-myristoylation. Annu. Rev. Genet. 63, 869-914 (1994).
16. Davis, T. N., Urdea, M. S., Masiarz, F. R. & Thorner, J. Isolation of the yeast calmodulin gene: calmodulin is an essential protein. Cell 47, 423-431 (1986).
17. 2+-binding proteins. Proc. Natl Acad. Sci. USA 83, 5512-5516 (1986).
18. 2+/calmodulin-dependent phosphoprotein phosphatases is required for adaptation to pheromone. Mol. Cell. Biol. 12, 3460-3469 (1992).
19. Stevens, R. C. & Davis, T. N. Mlc1p is a light chain for the unconventional myosin Myo2p in Saccharomyces cerevisiae. J. Cell Biol. 142, 711-722 (1998).
20. Jacq, C. et al. The nucleotide sequence of Saccharomyces cerevisiae chromosome IV. Nature 387, (Suppl.), 75-78 (1997).
21. Ray, S. et al. Cloning, expression, and crystallization of recoverin, a calcium sensor in vision. Proc. Natl Acad. Sci. USA 89, 5705-5709 (1992).
22. 2+-binding protein frequenin. Proc. Natl Acad. Sci. USA 92, 8001-8005 (1995).
23. Muhlrad, D., Hunter, R. & Parker, R. A rapid method for localized mutagenesis of yeast genes. Yeast 8, 79-82 (1992).
24. Sikorski, R. S. & Boeke, J. D. In vitro mutagenesis and plasmid shuffling: from cloned gene to mutant yeast. Methods Enzymol. 194, 302-318 (1991).
25. Davis, T. N. A temperature-sensitive calmodulin mutant loses viability during mitosis. J Cell Biol. 118, 607-617 (1992).
26. Ohya, Y. & Botstein, D. Structure-based systematic isolation of conditional-lethal mutations in the single yeast calmodulin gene. Genetics 138, 1041-1054 (1994).
27. Flanagan, C. A. et al. Phosphatidylinositol 4-kinase: gene structure and requirement for yeast cell viability. Science 262, 1444-1448 (1993).
28. Schnieders, E. A. Biochemical and Genetic Analysis of a Phosphatidylinositol 4-Kinase (PIK1 Gene Product) in the yeast Saccharomyces cerevisiae. Thesis, Univ. California, Berkeley (1996).
29. Fruman, D. A., Meyers, R. E. & Cantley, L. C. Phosphoinositide kinases. Annu. Rev. Biochem. 67, 481-507 (1998).
30. Gehrmann, T. & Heilmeyer, L. M. Jr Phosphatidylinositol 4-kinases. Eur. J. Biochem. 253, 357-370 (1998).
31. Evan, G. I., Lewis, G. K., Ramsay, G. & Bishop, J. M. Isolation of monoclonal antibodies specific for human c-myc proto-oncogene product. Mol. Cell. Biol. 5, 3610-3616 (1985).
32. Auble, D. T. et al. Mot1, a global repressor of RNA polymerase II transcription, inhibits TBP binding to DNA by an ATP-dependent mechanism. Genes Dev. 8, 1920-1934 (1994).
33. Flanagan, C. A. & Thorner, J. Purification and characterization of a soluble phosphatidyl-inositol 4-kinase from the yeast Saccharomyces cerevisiae. J. Biol. Chem. 267, 24117-24125 (1992).
34. Hendricks, K. B. The FRQ1 Gene Product is a Positive Regulator of Phosphatidylinositol 4-Kinase in the yeast Saccharomyces cerevisiae. Thesis, Univ. California, Berkeley (1999).
35. Vignes, M., Blanc, E., Sassetti, I. & Recasens, M. Intra-vs extracellular calcium regulation of neurotransmarter-stimulated phosphoinositide breakdown. Neurochem. Intl 28, 145-153 (1996).
36. 2 in exocytotic membrane fusion. Biochem. Soc. Trans. 25, 1137-1141 (1997).
37. Jost, M., Simpson, F., Kavran, J. M., Lemmon, M. A. & Schmid, S. L. Phosphatidyl-inositol-4,5-bisphosphate is required for endocytic coated vesicle formation. Curr. Biol. 8, 1399-1402 (1998).
38. 2+ sensor 1, the mammalian homologue of frequenin, is expressed in chromaffin and PC12 cells and regulates neurosecretion from dense-core granules. J. Biol. Chem. 273, 22768-22772 (1998).
39. Wiedemann, C., Schafer, T., Burger, M. M. & Sihra, T. S. An essential role for a small synaptic vesicle-associated phosphatidylinositol 4-kinase in neurotransmitter release. J. Neurosci. 18, 5594-5602 (1998).
40. Yoshida, S., Ohya, Y., Goebl, M., Nakano, A. & Anraku, Y. A novel gene, STT4, encodes a phosphatidylinositol 4-kinase in the PKC1 protein kinase pathway of Saccharomyces cerevisiae. J. Biol. Chem. 269, 1166-1172 (1994).
41. Rebecchi, M. J. & Scarlata, S. Pleckstrin homology domains: a common fold with diverse functions. Annu. Rev. Biophys. Biomol. Struct. 27, 503-528 (1998).
42. Sherman, F., Fink, G. R. & Hicks, J. A. Laboratory Course Manual for Methods in Yeast Genetics (Cold Spring Harb. Lab. Press, Cold Spring Harbor, 1986).
43. Guthrie, C. & Fink, G. R. Guide to Yeast Genetics and Molecular Biology (Academic, New York, 1991).
44. Sambrook, J., Fritsch, E. F. & Maniatis, T. Molecular Cloning: A Laboratory Manual (Cold Spring Harb. Lab. Press, Cold Spring Harbor, 1989).
45. Feinberg, A. P. & Vogelstein, B. A technique for radiolabeling DNA restriction endonuclease fragments to high specific activity. Anal. Biochem. 132, 6-13 (1983).
46. Jones, J. S. & Prakash, L. Yeast Saccharomyces cerevisiae selectable markers in pUC18 polylinkers. Yeast 6, 363-366 (1990).
47. Rothstein, R. J. One-step gene disruption in yeast. Methods Enzymol. 101, 202-211 (1983).
48. Hoffman, C. S. & Winston, F. A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli. Gene 57, 267-272 (1987).
49. Southern, E. M. Detection of specific sequences among DNA fragments separated by gel electrophoresis. J. Mol. Biol. 98, 503-517 (1975).
50. Sikorski, R. S. & Hieter, P. A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae. Genetics 122, 19-27 (1989).
51. Hill, J. E., Myers, A. M., Koerner, T. J. & Tzagoloff, A. Yeast/E. coli shuttle vectors with multiple unique restriction sites. Yeast 2, 163-167 (1986).
52. Johnston, M. & Davis, R. W. Sequences that regulate the divergent GAL1-GAL10 promoter in Saccharomyces cerevisiae. Mol. Cell. Biol. 4, 1440-1448 (1984).
53. Benton, B. M. et al. Signal-mediated import of bacteriophage T7 RNA polymerase into the Saccharomyces cerevisiae nucleus and specific transcription of target genes. Mol. Cell. Biol. 10, 353-360 (1990).
54. Benton, B. M., Zang, J. H. & Thorner, J. A novel FK506- and rapamycin-binding protein (FPR3 gene product) in the yeast Saccharomyces cerevisiae is a proline rotamase localized to the nucleolus. J. Cell Biol. 127, 623-639 (1994).
55. Duronio, R. J., Rudnick, D. A., Johnson, R. L., Linder, M. E. & Gordon, J. I. Reconstitution of protein N-myristoylation in Escherichia coli. Methods 1, 253-263 (1990).