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Volumn 21, Issue 2, 1999, Pages 110-120

Clearing a path through the jungle: Progress in Arabidopsis genomics

Author keywords

[No Author keywords available]

Indexed keywords

GENE SEQUENCING; GENOME ANALYSIS; PLANT GENETICS;

EID: 0033083030     PISSN: 02659247     EISSN: None     Source Type: Journal    
DOI: 10.1002/(SICI)1521-1878(199902)21:2<110::AID-BIES5>3.0.CO;2-V     Document Type: Review
Times cited : (28)

References (51)
  • 1
    • 0030637181 scopus 로고    scopus 로고
    • Plants and the logic of development
    • Meyerowitz EM. Plants and the logic of development. Genetics 1997:145: 5-9.
    • (1997) Genetics , vol.145 , pp. 5-9
    • Meyerowitz, E.M.1
  • 2
    • 0023053043 scopus 로고
    • Characterization of the genome of Arabidopsis thaliana
    • Pruitt RE, Meyerowitz EM. Characterization of the genome of Arabidopsis thaliana. J Mol Biol 1986:187:169-183.
    • (1986) J Mol Biol , vol.187 , pp. 169-183
    • Pruitt, R.E.1    Meyerowitz, E.M.2
  • 3
    • 0027947742 scopus 로고
    • A karyotype of the Arabidopsis thaliana genome derived from synaptonemal complex analysis at prophase I of meiosis
    • Albini SM. A karyotype of the Arabidopsis thaliana genome derived from synaptonemal complex analysis at prophase I of meiosis. Plant J 1994;5: 665-672.
    • (1994) Plant J , vol.5 , pp. 665-672
    • Albini, S.M.1
  • 6
    • 0030087850 scopus 로고    scopus 로고
    • RFLP and physical mapping with an rDNA-specific endonuclease reveals that nucleolus organizer regions of Arabidopsis thaliana adjoin the telomeres on chromosomes 2 and 4
    • Copenhaver GP, Pikaard CS. RFLP and physical mapping with an rDNA-specific endonuclease reveals that nucleolus organizer regions of Arabidopsis thaliana adjoin the telomeres on chromosomes 2 and 4. Plant J 1996;9:259-272.
    • (1996) Plant J , vol.9 , pp. 259-272
    • Copenhaver, G.P.1    Pikaard, C.S.2
  • 7
    • 0030087851 scopus 로고    scopus 로고
    • Two-dimensional RFLP analyses reveal megabase-sized clusters of rRNA gens variants in Arabidopsis thaliana, suggesting locel spreading of variants as the mode for gene homogenization during concerted evolution
    • Copenhaver GP, Pikaard CS. Two-dimensional RFLP analyses reveal megabase-sized clusters of rRNA gens variants in Arabidopsis thaliana, suggesting locel spreading of variants as the mode for gene homogenization during concerted evolution. Plant J 1996;9:273-282.
    • (1996) Plant J , vol.9 , pp. 273-282
    • Copenhaver, G.P.1    Pikaard, C.S.2
  • 8
    • 0024281368 scopus 로고
    • Isolation of a higher eukaryotic telomere from Arabidopsis thaliana
    • Richards EJ, Ausubel FM. Isolation of a higher eukaryotic telomere from Arabidopsis thaliana. Cell 1988;53:127-136.
    • (1988) Cell , vol.53 , pp. 127-136
    • Richards, E.J.1    Ausubel, F.M.2
  • 9
    • 0026698209 scopus 로고
    • Characterization of Arabidopsis thaliana telomeres isolated in yeast
    • Richards EJ, Chao S, Vongs A, Yang J. Characterization of Arabidopsis thaliana telomeres isolated in yeast. Nucleic Acids Res 1992;20:4039-4046.
    • (1992) Nucleic Acids Res , vol.20 , pp. 4039-4046
    • Richards, E.J.1    Chao, S.2    Vongs, A.3    Yang, J.4
  • 10
    • 0031892737 scopus 로고    scopus 로고
    • Assaying gerome-wide recombination and centromere functions with Arabidopsis tetrads
    • Copenhaver CS, Browne WE, Preuss D. Assaying gerome-wide recombination and centromere functions with Arabidopsis tetrads. Proc Natl Acad Sci USA 1998;95:247-252.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 247-252
    • Copenhaver, C.S.1    Browne, W.E.2    Preuss, D.3
  • 11
    • 0031263162 scopus 로고    scopus 로고
    • Arabidopsis thaliana centromere regions: Genetic map positions and repetitive DNA structure
    • Round E, Flowers SK, Richards EJ. Arabidopsis thaliana centromere regions: genetic map positions and repetitive DNA structure. Genome Res 1997;7:1045-1054.
    • (1997) Genome Res , vol.7 , pp. 1045-1054
    • Round, E.1    Flowers, S.K.2    Richards, E.J.3
  • 12
    • 0000012426 scopus 로고
    • Recombinant inbred lines for mapping RFLP and phenotypic markers in Arabidopsis thaliana
    • Lister C, Dean C. Recombinant inbred lines for mapping RFLP and phenotypic markers in Arabidopsis thaliana. Plant J 1993;4:745-750.
    • (1993) Plant J , vol.4 , pp. 745-750
    • Lister, C.1    Dean, C.2
  • 15
    • 0031104738 scopus 로고    scopus 로고
    • Description of 31 YAC contigs spanning the majority of Arabidopsis thaliana chromosome 5
    • Schmidt R, Love K, West J, Lenehan Z, Dean C. Description of 31 YAC contigs spanning the majority of Arabidopsis thaliana chromosome 5. P ant J 1997;11:563-572.
    • (1997) P Ant J , vol.11 , pp. 563-572
    • Schmidt, R.1    Love, K.2    West, J.3    Lenehan, Z.4    Dean, C.5
  • 17
    • 0032033129 scopus 로고    scopus 로고
    • BAC representation of two low-copy regions of the genome of Arabidopsis thaliana
    • Bent E, Johnson S, Bancroft I. BAC representation of two low-copy regions of the genome of Arabidopsis thaliana. Plant J 1998;13:849-855.
    • (1998) Plant J , vol.13 , pp. 849-855
    • Bent, E.1    Johnson, S.2    Bancroft, I.3
  • 19
    • 0030690108 scopus 로고    scopus 로고
    • FPC: A system for building contigs from restriction-fingerprinted clones
    • Soderlund C, Longden I, Mott R. FPC: a system for building contigs from restriction-fingerprinted clones. CABIOS 1997;13:523-535.
    • (1997) CABIOS , vol.13 , pp. 523-535
    • Soderlund, C.1    Longden, I.2    Mott, R.3
  • 20
    • 0029955205 scopus 로고    scopus 로고
    • A new strategy for genome sequencing
    • Venter JC, Smith HO, Hood L. A new strategy for genome sequencing. Nature 1996;381:364-366.
    • (1996) Nature , vol.381 , pp. 364-366
    • Venter, J.C.1    Smith, H.O.2    Hood, L.3
  • 22
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequence traces using Phred. I. Accuracy assessment
    • Ewing B, Hillier L, Wendl MC, Green P. Base-calling of automated sequence traces using Phred. I. Accuracy assessment. Genome Res 1998;8:175-186
    • (1998) Genome Res , vol.8 , pp. 175-186
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 23
    • 0031591536 scopus 로고    scopus 로고
    • Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence features of the 1.6 Mb regions covered by twenty physically-assigned P1 clones
    • Sato S, Kotani H, Nakamura Y, Kaneko T, Asamizu E, Fukami M, Miyajima N, Tabata S. Structural analysis of Arabidopsis thaliana chromosome 5. I. Sequence features of the 1.6 Mb regions covered by twenty physically-assigned P1 clones. DNA Res 1997;4:215-230
    • (1997) DNA Res , vol.4 , pp. 215-230
    • Sato, S.1    Kotani, H.2    Nakamura, Y.3    Kaneko, T.4    Asamizu, E.5    Fukami, M.6    Miyajima, N.7    Tabata, S.8
  • 24
    • 0031592732 scopus 로고    scopus 로고
    • Structura: Analysis of Arabidopsis thaliana chromosome 5. II. Sequence features of 1,044.062 bp covered by thirteen physically-assigned P1 clones
    • Kotani H, Nakamura Y, Sato S, Kaneko T, Asamizu E, Miyajima N, Tabata S. Structura: analysis of Arabidopsis thaliana chromosome 5. II. Sequence features of 1,044.062 bp covered by thirteen physically-assigned P1 clones. DNA Res 1997;4:291-300.
    • (1997) DNA Res , vol.4 , pp. 291-300
    • Kotani, H.1    Nakamura, Y.2    Sato, S.3    Kaneko, T.4    Asamizu, E.5    Miyajima, N.6    Tabata, S.7
  • 25
    • 0006922663 scopus 로고    scopus 로고
    • Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana
    • Bevan M. et al. Analysis of 1.9 Mb of contiguous sequence from chromosome 4 of Arabidopsis thaliana. Nature 1998;391:485-488.
    • (1998) Nature , vol.391 , pp. 485-488
    • Bevan, M.1
  • 28
    • 0028965514 scopus 로고
    • Trans-splicing and polycistronic transcription in Caenorhabditis elegans
    • Blumenthal T. Trans-splicing and polycistronic transcription in Caenorhabditis elegans. Trends Genet 1995;11:132-136.
    • (1995) Trends Genet , vol.11 , pp. 132-136
    • Blumenthal, T.1
  • 29
    • 8544240102 scopus 로고    scopus 로고
    • Overview of the yeast genome
    • Mewes H-W, et al. Overview of the yeast genome. Nature 1997;387:7-84.
    • (1997) Nature , vol.387 , pp. 7-84
    • Mewes, H.-W.1
  • 30
    • 0027133165 scopus 로고
    • Functions of gene products in E. coli
    • Riley M. Functions of gene products in E. coli. Microbiol Rev 1993;57:862-952.
    • (1993) Microbiol Rev , vol.57 , pp. 862-952
    • Riley, M.1
  • 31
    • 0030660581 scopus 로고    scopus 로고
    • A genome perspective on protein families
    • Tatusov RL, Koonin EV, Lipman DJ. A genome perspective on protein families. Science 1997;278:631-637.
    • (1997) Science , vol.278 , pp. 631-637
    • Tatusov, R.L.1    Koonin, E.V.2    Lipman, D.J.3
  • 33
    • 0031977016 scopus 로고    scopus 로고
    • The riddle of MAP kmase signaling specificity
    • Madhani HD, Fink GR. The riddle of MAP kmase signaling specificity. Trends Genet 1998;14:151-155.
    • (1998) Trends Genet , vol.14 , pp. 151-155
    • Madhani, H.D.1    Fink, G.R.2
  • 35
    • 0031170922 scopus 로고    scopus 로고
    • Efficient gene targeting in the moss Physcomitrella patens
    • Schaefer DG, Zryd JP. Efficient gene targeting in the moss Physcomitrella patens. Plant J 1997;6:1195-1206.
    • (1997) Plant J , vol.6 , pp. 1195-1206
    • Schaefer, D.G.1    Zryd, J.P.2
  • 36
    • 0032146398 scopus 로고    scopus 로고
    • The behavior of the autonomous maize transposable element En/Spm in Arabidopsis thaliana allows efficient mutagenesis
    • Wisman E, Cardon GH, Fransz P, Saedler H. The behavior of the autonomous maize transposable element En/Spm in Arabidopsis thaliana allows efficient mutagenesis. Plant Mol Biol 1998;37:989-999.
    • (1998) Plant Mol Biol , vol.37 , pp. 989-999
    • Wisman, E.1    Cardon, G.H.2    Fransz, P.3    Saedler, H.4
  • 37
    • 0027184699 scopus 로고
    • Transposable element tagging of a male sterility gene in Arabidopsis
    • Aarts GM, Dirks WJ, Stiekema WJ, Pereira A. Transposable element tagging of a male sterility gene in Arabidopsis. Nature 1993;363:715-717.
    • (1993) Nature , vol.363 , pp. 715-717
    • Aarts, G.M.1    Dirks, W.J.2    Stiekema, W.J.3    Pereira, A.4
  • 38
    • 0027323813 scopus 로고
    • Transposition pattern of the maize element Ds in Arabidopsis thaliana
    • Bancroft I, Dean C. Transposition pattern of the maize element Ds in Arabidopsis thaliana. Genetics 1993;134:1221-1229.
    • (1993) Genetics , vol.134 , pp. 1221-1229
    • Bancroft, I.1    Dean, C.2
  • 39
    • 0028065689 scopus 로고
    • A heat-shock promoter fusion to the Ac transposase gene drives inducible transposition of a Ds element during arabidopsis embryo development
    • Balcells LI, Sundberg E, Coupland G A heat-shock promoter fusion to the Ac transposase gene drives inducible transposition of a Ds element during Arabidopsis embryo development. Plant 1994;5:755-764.
    • (1994) Plant , vol.5 , pp. 755-764
    • Balcells, L.I.1    Sundberg, E.2    Coupland, G.3
  • 41
    • 0029055907 scopus 로고
    • Gene trap tagging of PROLIFERA, and essential MCM2-3-5-like gene in Arabidopsis
    • Springer P, McCombie W, Sundaresan V, Martienssen R. Gene trap tagging of PROLIFERA, and essential MCM2-3-5-like gene in Arabidopsis. Science 1995;268:877-880.
    • (1995) Science , vol.268 , pp. 877-880
    • Springer, P.1    McCombie, W.2    Sundaresan, V.3    Martienssen, R.4
  • 42
    • 0006180620 scopus 로고    scopus 로고
    • The late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering
    • Schaffer R, Ramsay N, Samach A, Corden S, Putterill J, Carre IA, Coupland G The late elongated hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering. Cell 1998;93:1219-1229.
    • (1998) Cell , vol.93 , pp. 1219-1229
    • Schaffer, R.1    Ramsay, N.2    Samach, A.3    Corden, S.4    Putterill, J.5    Carre, I.A.6    Coupland, G.7
  • 43
    • 0032496329 scopus 로고    scopus 로고
    • A role for the AKT1 potassium channel in plant nutrition
    • Hirsch RE, Lewis BD, Spalding EP, Sussman MR. A role for the AKT1 potassium channel in plant nutrition Science 1998;280:918-921.
    • (1998) Science , vol.280 , pp. 918-921
    • Hirsch, R.E.1    Lewis, B.D.2    Spalding, E.P.3    Sussman, M.R.4
  • 44
    • 0024712231 scopus 로고
    • Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data
    • Wolfe K, Gouy M, Yang Y-W, Sharp P, Li W-H. Date of the monocot-dicot divergence estimated from chloroplast DNA sequence data. Proc Natl Acad Sci USA 1989;86:6201-6205.
    • (1989) Proc Natl Acad Sci USA , vol.86 , pp. 6201-6205
    • Wolfe, K.1    Gouy, M.2    Yang, Y.-W.3    Sharp, P.4    Li, W.-H.5
  • 45
    • 16144364971 scopus 로고    scopus 로고
    • Towards a unified genetic map of higher plants, transcending the monocot-dico: Divergence
    • Patterson AH, et al. Towards a unified genetic map of higher plants, transcending the monocot-dico: divergence. Nature Genet 1996;14:380-382.
    • (1996) Nature Genet , vol.14 , pp. 380-382
    • Patterson, A.H.1
  • 46
    • 0032561403 scopus 로고    scopus 로고
    • Plant comparative genetics after 10 years
    • Gale M, Devos K. Plant comparative genetics after 10 years. Science 1998;282:656-658.
    • (1998) Science , vol.282 , pp. 656-658
    • Gale, M.1    Devos, K.2
  • 47
    • 0032125381 scopus 로고    scopus 로고
    • Transcriptional regulators and the evolution of plant form
    • Doebly J, Lukens L. Transcriptional regulators and the evolution of plant form. Plant Cell 1998;10:1075-1082.
    • (1998) Plant Cell , vol.10 , pp. 1075-1082
    • Doebly, J.1    Lukens, L.2
  • 48
    • 0029791403 scopus 로고    scopus 로고
    • Splice-site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information
    • Hebsgaard SM, Korning PG, Tolstrop J. Rouze P, Brunak S. Splice-site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information. Nucleic Acids Res 1996;24:3479-3452.
    • (1996) Nucleic Acids Res , vol.24 , pp. 3479-13452
    • Hebsgaard, S.M.1    Korning, P.G.2    Tolstrop, J.3    Rouze, P.4    Brunak, S.5
  • 50
    • 0000241874 scopus 로고
    • GENMARK: Parallel gene recognition for both DNA strands
    • Borodovsky M, McIninch J. GENMARK: parallel gene recognition for both DNA strands. Comp Chem 1993;17:123-133.
    • (1993) Comp Chem , vol.17 , pp. 123-133
    • Borodovsky, M.1    McIninch, J.2
  • 51
    • 0031586003 scopus 로고    scopus 로고
    • Prediction of complete gene structures in human genomic DNA
    • Burge C, Karlin S. Prediction of complete gene structures in human genomic DNA. J Mol Biol 1997;268:78-94.
    • (1997) J Mol Biol , vol.268 , pp. 78-94
    • Burge, C.1    Karlin, S.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.