High-resolution genotyping of Campylobacter strains isolated from poultry and humans with amplified fragment length polymorphism fingerprinting

Applied and Environmental Microbiology

Volumn 65, Issue 6, 1999, Pages 2369-2375

  Duim, Birgitta ^a   Wassenaar, Trudy M ^b   Rigter, Alan ^a   Wagenaar, Jaap ^a  

^a WAGENINGEN UNIVERSITY   (Netherlands)

^b JOHANNES GUTENBERG UNIVERSITY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA;

ARTICLE; BACTERIUM ISOLATION; CAMPYLOBACTER; GASTROENTERITIS; GENE AMPLIFICATION; GENOTYPE; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; POULTRY; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; STRAIN DIFFERENCE;

BACTERIA (MICROORGANISMS); CAMPYLOBACTER; CAMPYLOBACTER COLI; CAMPYLOBACTER JEJUNI;

EID: 0033050261     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/aem.65.6.2369-2375.1999     Document Type: Article

References (31)

1. Aeschbacher, M., and J. Piffaretti. 1989. Population genetics of human and animal enteric Campylobacter strains. Infect. Immun. 57:1432-1437.
2. Gibson, J. R., C. Fitzgerland, and J. Owen. 1995. Comparison of PFGE, ribotyping and phage-typing in the epidemiological analysis of Campylobacter jejuni serotype HS2 infections. Epidemiol. Infect. 115:215-225.
3. Harrington, C. S., F. M. Thomson-Carter, and P. E. Carter. 1997. Evidence for recombination in the flagellin locus of Campylobacter jejuni: implications for the flagellin gene typing scheme. J. Clin. Microbiol. 35:2386-2392.
4. Harvey, S. M., and J. R. Greenwood. 1983. Relationships among catalase-positive campylobacters determined by deoxyribonucleic acid-deoxyribonucleic acid hybridization, Int. J. Syst. Bacteriol. 33:275-284.
5. Huys, G., R. Coopman, P. Janssen, and K. Kersters. 1996. High-resolution genotypic analysis of the genus Aeromonas by AFLP fingerprinting. Int. J. Syst Bacteriol. 44:572-580.
6. Jackson, C. J., A. J. Fox, D. R. A. Wareing, D. N. Hutchinson, and D. M. Jones. 1996. The application of genotyping techniques to the epidemiological analysis of Campylobacter jejuni. Epidemiol. Infect. 117:233-244.
7. Jacobs-Reitsma, W., N. M. Bolder, and R. W. A. W. Mulder. 1994 Caecal carriage of Campylobacter and Salmonella in Dutch broiler flocks at slaughter: a one-year study. Poult. Sci. 73:1260-1266.
8. Janssen, P., R. Coopman, G. Huys, J. Swings, M. Bleeker, P. Vos, M. Zabeau, and K. Kersters. 1996. Evaluation of the DNA fingerprinting method AFLP as a new tool in bacterial taxonomy. Microbiology 142:1881-1893.
9. Janssen, P., K. Maquelin, R. Coopman, R. Tjernberg, P. Bouvet, K. Kersters, and L. Dijkshoorn. 1997. Discrimination of Acinetobacter genomic species by AFLP fingerprinting. Int. J. Syst. Bacteriol. 47:1179-1187.
10. Kiem, P., A. Kalif, J. Schupp, K. Hill, S. E. Travis, K. Richmond, D. M. Adair, M. Hugh-Jones, C. R. Kuske, and P. Jackson. 1997. Molecular evolution and diversity in Bacillus anthracis as detected by amplified fragment length polymorphism markers. J. Bacteriol. 179:818-824.
11. Mazurier, S., A. van der Glessen, K. Heuvelman, and K. Wernars. 1992. RAPD analysis of Campylobacter isolates: DNA fingerprinting without the need to purify DNA. Lett. Appl. Microbiol. 14:260-262.
12. Meinersmann, R. J., L. O. Helsel, P. I. Fields, and K. L. Hiett. 1997. Discrimination of Campylobacter jejuni isolates by fla gene sequencing. J. Clin. Microbiol. 35:2810-2814.
13. Mishu, B., A. A. Ilyas, C. L. Koski, F. Vriesendorp, S. D. Cook, F. A. Mithen, and M. J. Blaser. 1993. Serologic evidence of previous Campylobacter jejuni infection in patients with the Guillain-Barré syndrome. Ann. Intern. Med. 118:947-953.
14. Møller Nielsen, E., J. Engberg, and M. Madsen. 1997. Distribution of serotypes of Campylobacter jejuni and C. coli from Danish patients, poultry, cattle and swine. FEMS Immunol. Med. Microbiol. 19:47-56.
15. Nachamkin, I., K. Bohachick, and C. M. Patton. 1993. Flagellin gene typing of Campylobacter jejuni by restriction fragment length polymorphism analysis. J. Clin. Microbiol. 31:1531-1536.
16. On, S. L. W. 1998. In vitro genotypic variation of Campylobacter coli documented by pulsed-field gel electrophoretic DNA profiling: implications for epidemiological studies. FEMS Microbiol. Lett. 165:341-346.
17. On, S. L. W., E. M. Nielsen, J. Engberg, and M. Madsen. 1998. Validity of SmaI-defined genotypes of Campylobacter jejuni examined by SalI, Kpn I, and BamHI polymorphisms: evidence of identical clones infecting humans, poultry, and cattle. Epidemiol. Infect. 120:231-237.
18. Palmer, S. R., P. R. Gully, J. M. White, A. D. Pearson, W. G. Suckling, D. M. Jones, J. C. Rawes, and J. L. Penner. 1982. Water-borne outbreak of Campylobacter gastroenteritis. Lancet i:287-290.
19. Patton, C. M., I. K. Wachsmuth, G. M. Evins, J. A. Kiehlbauch, N. Plikaytis, L. Troup, L. Tompkins, and H. Lior. 1991. Evaluation of 10 methods to distinguish epidemic-associated Campylobacter isolates. J. Clin. Microbiol. 29:680-688.
20. Perkin-Elmer Corporation. 1996. Microbial AFLP fingerprinting protocol. Perkin-Elmer Corp., Norwalk, Conn.
21. Skirrow, M. B., and M. J. Blaser. 1992. Clinical and epidemiological considerations, p. 3-9. In I. Nachamkin, M. J. Blaser, and L. S. Tompkins (ed.), Campylobacter jejuni: current status and future trends. American Society for Microbiology, Washington, D.C.
22. Sloos, J. H., P. Janssen, C. P. A. van Boven, and L. Dijkshoorn. 1998. AFLP typing of Staphylococcus epidermidis in multiple sequential blood cultures. Res. Microbiol. 149:221-228.
23. Tauxe, R. V. 1992. Epidemiology of Campylobacter jejuni infections in the United States and other industrialized countries, p. 9-19. In I. Nachamkin, M. J. Blaser, and L. S. Tompkins (ed.), Campylobacter jejuni: current status and future trends. American Society for Microbiology, Washington, D.C.
24. Tenover, F. C., R. D. Arbeit, R. V. Goering, P. A. Mickelsen, B. E. Murray, D. H. Persing, and B. Swaminathan. 1995. Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing. J. Clin. Microbiol. 33:2233-2239.
25. Van der Giessen, A. W., J. J. H. C. Tilburg, W. S. Ritmeester, and J. van der Plas. 1998. Reduction of Campylobacter infections in broiler flocks by application of hygiene measures. Epidemiol. Infect. 121:57-66.
26. Van der Plas, J., H. Hofstra, and J. H. J. Huis in 't veld. 1993. DNA probe assays for detection, identification and typing of Campylobacter species and Helicobacter pylori. Microb. Ecol. Health Dis 4:S60.
27. Vauterin, L. A., and P. Vauterin. 1992. Computer-aided objective comparison of electrophoresis patterns for grouping and identification of microorganisms. Eur. Microbiol. 1:37-41.
28. Vos, P., R. Hogers, M. Bleeker, M. Reijans, T. van der Lee, M. Hames, A. Frijters, J. Pot, J. Peleman, J. Kuiper, and M. Zabeau. 1996. AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res. 23:4407-4414.
29. Wassenaar, T. M., N. M. C. Bleumink-Pluym, and B. A. M. van der Zeijst. 1991. Inactivation of Campylobacter jejuni flagellin genes by homologous recombination demonstrates that flaA but not flaB is required for invasion. EMBO J. 10:2055-2061.
30. Wassenaar, T. M., B. N. Fry, and B. A. M. van der Zeijst. 1995. Variation of the flagellin gene locus of Campylobacter jejuni by recombination and horizontal gene transfer. Microbiology 141:95-101.
31. Wassenaar, T. M., B. Geilhausen, and D. G. Newell. 1998. Evidence of genomic instability in Campylobacter jejuni isolated from poultry meat. Appl. Environ. Microbiol. 64:1815-1821.