-
1
-
-
0027474991
-
Left-handed polyproline II helices commonly occur in globular proteins
-
Adzhubei AA, Sternberg MJE. 1993. Left-handed polyproline II helices commonly occur in globular proteins. J Mol Biol 229:472-493.
-
(1993)
J Mol Biol
, vol.229
, pp. 472-493
-
-
Adzhubei, A.A.1
Sternberg, M.J.E.2
-
2
-
-
0017411710
-
The Protein Data Bank: A computer-based archival file for macromolecular structures
-
Bernstein FC, Koetzle TF, Williams G, Meyer DJ, Brice MD, Rodgers JR, Kennard O, Shimanouchi T, Tasumi M. 1977. The Protein Data Bank: A computer-based archival file for macromolecular structures. J Mol Biol 112:535-542.
-
(1977)
J Mol Biol
, vol.112
, pp. 535-542
-
-
Bernstein, F.C.1
Koetzle, T.F.2
Williams, G.3
Meyer, D.J.4
Brice, M.D.5
Rodgers, J.R.6
Kennard, O.7
Shimanouchi, T.8
Tasumi, M.9
-
3
-
-
0000670923
-
Structure of poly-L-proline
-
Cowan PM, McGavin S. 1955. Structure of poly-L-proline. Nature 176:470-478.
-
(1955)
Nature
, vol.176
, pp. 470-478
-
-
Cowan, P.M.1
McGavin, S.2
-
4
-
-
0029020484
-
N- and C-capping preferences for all 20 amino acids in alpha-helical peptides
-
Doig AJ, Baldwin RL. 1995. N- and C-capping preferences for all 20 amino acids in alpha-helical peptides. Protein Sci 4:1325-1336.
-
(1995)
Protein Sci
, vol.4
, pp. 1325-1336
-
-
Doig, A.J.1
Baldwin, R.L.2
-
6
-
-
0028429178
-
Conformational analysis of the backbone-dependent rotamer preferences of protein side chains
-
Dunbrack RL Jr, Karplus M. 1994. Conformational analysis of the backbone-dependent rotamer preferences of protein side chains. Nature Struct Biol 1:334-340.
-
(1994)
Nature Struct Biol
, vol.1
, pp. 334-340
-
-
Dunbrack R.L., Jr.1
Karplus, M.2
-
7
-
-
0027962645
-
Two binding orientations for peptides to the Src SH3 domain: Development of a general model for SH3-ligand interactions
-
Feng S, Chen JK, Yu H, Simon JA, Schreiber SL. 1994. Two binding orientations for peptides to the Src SH3 domain: Development of a general model for SH3-ligand interactions. Science 266:1241-1247.
-
(1994)
Science
, vol.266
, pp. 1241-1247
-
-
Feng, S.1
Chen, J.K.2
Yu, H.3
Simon, J.A.4
Schreiber, S.L.5
-
8
-
-
0018400235
-
Chain conformation in the collagen molecule
-
Fraser RDB, MacRae TP, Suzuki E. 1979. Chain conformation in the collagen molecule. J Mol Biol 129:463-481.
-
(1979)
J Mol Biol
, vol.129
, pp. 463-481
-
-
Fraser, R.D.B.1
MacRae, T.P.2
Suzuki, E.3
-
9
-
-
0019876875
-
The specificity of proanthocyanidin-protein interactions
-
Hagerman AE, Butler LG. 1981. The specificity of proanthocyanidin-protein interactions. J Biol Chem 256:4494-4497.
-
(1981)
J Biol Chem
, vol.256
, pp. 4494-4497
-
-
Hagerman, A.E.1
Butler, L.G.2
-
10
-
-
0025599473
-
TonB protein of Salmonella typhimurium. A model for signal transduction between membranes
-
Hannavy K, Barr GC, Dorman CJ, Adamson J, Mazengera LR, Gallagher MP, Evans JS, Levine BA, Trayer IP, Higgins CF. 1990. TonB protein of Salmonella typhimurium. A model for signal transduction between membranes. J Mol Biol 216:897-910.
-
(1990)
J Mol Biol
, vol.216
, pp. 897-910
-
-
Hannavy, K.1
Barr, G.C.2
Dorman, C.J.3
Adamson, J.4
Mazengera, L.R.5
Gallagher, M.P.6
Evans, J.S.7
Levine, B.A.8
Trayer, I.P.9
Higgins, C.F.10
-
11
-
-
0028205447
-
Enlarged representative set of protein structures
-
Hobohm U, Sander C. 1994. Enlarged representative set of protein structures. Protein Sci 3:522-524.
-
(1994)
Protein Sci
, vol.3
, pp. 522-524
-
-
Hobohm, U.1
Sander, C.2
-
12
-
-
0003742069
-
-
London: Department of Biochemistry and Molecular Biology, University College London
-
Hubbard SJ, Thornton JM. 1993. "NACCESS," computer program. London: Department of Biochemistry and Molecular Biology, University College London.
-
(1993)
"NACCESS," Computer Program
-
-
Hubbard, S.J.1
Thornton, J.M.2
-
13
-
-
0014966180
-
IUPAC-IUB Commission On Biochemical Nomenclature. Abbreviations and symbols for the description of the conformation of polypeptide chains
-
IUPAC-IUB. 1970. IUPAC-IUB Commission on Biochemical Nomenclature. Abbreviations and symbols for the description of the conformation of polypeptide chains. J Mol Biol 52:1-17.
-
(1970)
J Mol Biol
, vol.52
, pp. 1-17
-
-
-
14
-
-
0030069683
-
Crystallographic analysis of endogenous peptides associated with HLA-DR1 suggests a common, polyproline II-like conformation for bound peptides
-
Jardetzky TS, Brown JH, Gorga JC, Stern LJ, Urban RG, Strominger JL, Wiley DC. 1996. Crystallographic analysis of endogenous peptides associated with HLA-DR1 suggests a common, polyproline II-like conformation for bound peptides. Proc Natl Acad Sci USA 93:734-738.
-
(1996)
Proc Natl Acad Sci USA
, vol.93
, pp. 734-738
-
-
Jardetzky, T.S.1
Brown, J.H.2
Gorga, J.C.3
Stern, L.J.4
Urban, R.G.5
Strominger, J.L.6
Wiley, D.C.7
-
15
-
-
0020997912
-
Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features
-
Kabsch W, Sander C. 1983. Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features. Biopolymers 22:2577-2637.
-
(1983)
Biopolymers
, vol.22
, pp. 2577-2637
-
-
Kabsch, W.1
Sander, C.2
-
16
-
-
0001339532
-
MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures
-
Kraulis PJ. 1992. MOLSCRIPT: A program to produce both detailed and schematic plots of protein structures. J Applied Cristallography 24:946-950.
-
(1992)
J Applied Cristallography
, vol.24
, pp. 946-950
-
-
Kraulis, P.J.1
-
17
-
-
0025119575
-
The SNF5 protein of Saccharomyces cerevisiae is a glutamine- and proline-rich transcriptional activator that affects expression of a broad spectrum of genes
-
Laurent BC, Gram M, Pongs O. 1990. The SNF5 protein of Saccharomyces cerevisiae is a glutamine-and proline-rich transcriptional activator that affects expression of a broad spectrum of genes. Mol Cell Biol 10:5616-5625.
-
(1990)
Mol Cell Biol
, vol.10
, pp. 5616-5625
-
-
Laurent, B.C.1
Gram, M.2
Pongs, O.3
-
18
-
-
0025890946
-
Influence of proline residues on protein conformation
-
MacArthur MW, Thornton JM. 1991. Influence of proline residues on protein conformation. J Mol Biol 218:397-412.
-
(1991)
J Mol Biol
, vol.218
, pp. 397-412
-
-
MacArthur, M.W.1
Thornton, J.M.2
-
19
-
-
0029775570
-
Structure of the WW domain of a kinase-associated protein complexed with a proline-rich peptide
-
Macias MJ, Hyvönen M, Baraldi E, Schultz J, Sudol M, Saraste M, Oschkinat H. 1996. Structure of the WW domain of a kinase-associated protein complexed with a proline-rich peptide. Nature 382:646-649.
-
(1996)
Nature
, vol.382
, pp. 646-649
-
-
Macias, M.J.1
Hyvönen, M.2
Baraldi, E.3
Schultz, J.4
Sudol, M.5
Saraste, M.6
Oschkinat, H.7
-
20
-
-
0030710460
-
Structure of the profilin-poly-L-proline complex involved in morphogenesis and cytoskeletal regulation
-
Mahoney NM, Janmey PA, Almo SC. 1997. Structure of the profilin-poly-L-proline complex involved in morphogenesis and cytoskeletal regulation. Nature Struct Biol 4:953-960.
-
(1997)
Nature Struct Biol
, vol.4
, pp. 953-960
-
-
Mahoney, N.M.1
Janmey, P.A.2
Almo, S.C.3
-
21
-
-
0028304962
-
Satisfying hydrogen bonding potential in proteins
-
McDonald IK, Thornton JM. 1994. Satisfying hydrogen bonding potential in proteins. J Mol Biol 238:777-793.
-
(1994)
J Mol Biol
, vol.238
, pp. 777-793
-
-
McDonald, I.K.1
Thornton, J.M.2
-
22
-
-
0023521842
-
Analysis of the relationship between side-chain conformation and secondary structure in globular proteins
-
McGregor MJ, Islam SA, Sternberg MJE. 1987. Analysis of the relationship between side-chain conformation and secondary structure in globular proteins. J Mol Biol 198:295-310.
-
(1987)
J Mol Biol
, vol.198
, pp. 295-310
-
-
McGregor, M.J.1
Islam, S.A.2
Sternberg, M.J.E.3
-
23
-
-
0027338121
-
The 2.0-Å resolution structure of soybean beta-amylase complexed with alpha-cyclodextrin
-
Mikami B, Hehre EJ, Sato M, Katsube Y, Hirose M, Morita Y, Sacchettini JC. 1993. The 2.0-Å resolution structure of soybean beta-amylase complexed with alpha-cyclodextrin. Biochemistry 32:6836-6845.
-
(1993)
Biochemistry
, vol.32
, pp. 6836-6845
-
-
Mikami, B.1
Hehre, E.J.2
Sato, M.3
Katsube, Y.4
Hirose, M.5
Morita, Y.6
Sacchettini, J.C.7
-
24
-
-
0028568650
-
Intrinsic secondary structure propensities of the amino acids, using statistical phi-psi matrices: Comparison with experimental scales
-
Muñoz V, Serrano L. 1994. Intrinsic secondary structure propensities of the amino acids, using statistical phi-psi matrices: Comparison with experimental scales. Proteins Struct Funct Genet 20:301-311.
-
(1994)
Proteins Struct Funct Genet
, vol.20
, pp. 301-311
-
-
Muñoz, V.1
Serrano, L.2
-
25
-
-
0028069242
-
Study of the interaction between salivary proline-rich proteins and a polyphenol by 1H-NMR spectroscopy
-
Murray NJ, Williamson MP, Lilley TH, Haslam E. 1994. Study of the interaction between salivary proline-rich proteins and a polyphenol by 1H-NMR spectroscopy. Eur J Biochem 219:923-935.
-
(1994)
Eur J Biochem
, vol.219
, pp. 923-935
-
-
Murray, N.J.1
Williamson, M.P.2
Lilley, T.H.3
Haslam, E.4
-
26
-
-
0031572833
-
The class II MHC protein HLA-DR1 in complex with an endogenous peptide: Implications for the structural basis of the specificity of peptide binding
-
Murthy VL, Stern LJ. 1997. The class II MHC protein HLA-DR1 in complex with an endogenous peptide: Implications for the structural basis of the specificity of peptide binding. Current Biol 5:1385-1396.
-
(1997)
Current Biol
, vol.5
, pp. 1385-1396
-
-
Murthy, V.L.1
Stern, L.J.2
-
27
-
-
0030809003
-
The role of PPII conformations in the calculation of peptide fractional helix content
-
Park S-H, Shalongo W, Stellwagen E. 1997. The role of PPII conformations in the calculation of peptide fractional helix content. Protein Sci 6:1694-1700.
-
(1997)
Protein Sci
, vol.6
, pp. 1694-1700
-
-
Park, S.-H.1
Shalongo, W.2
Stellwagen, E.3
-
28
-
-
0028859279
-
Protein modules and signaling networks
-
Pawson T. 1995. Protein modules and signaling networks. Nature 373:573-580.
-
(1995)
Nature
, vol.373
, pp. 573-580
-
-
Pawson, T.1
-
29
-
-
0030475459
-
Structural requirements and thermodynamics of the interaction of proline peptides with profilin
-
Petrella EC, Machesky LM, Kaiser DA, Pollard TD. 1996. Structural requirements and thermodynamics of the interaction of proline peptides with profilin. Biochemistry 35:16535-16543.
-
(1996)
Biochemistry
, vol.35
, pp. 16535-16543
-
-
Petrella, E.C.1
Machesky, L.M.2
Kaiser, D.A.3
Pollard, T.D.4
-
30
-
-
0023155210
-
Tertiary templates for proteins - Use of packing criteria in the enumeration of allowed sequences for different structural classes
-
Ponder JW, Richards FM. 1987. Tertiary templates for proteins - Use of packing criteria in the enumeration of allowed sequences for different structural classes. J Mol Biol 193:775-791.
-
(1987)
J Mol Biol
, vol.193
, pp. 775-791
-
-
Ponder, J.W.1
Richards, F.M.2
-
32
-
-
0024290488
-
Helix signals in proteins
-
Presta LG, Rose GD. 1988. Helix signals in proteins. Science 240:1632-1641.
-
(1988)
Science
, vol.240
, pp. 1632-1641
-
-
Presta, L.G.1
Rose, G.D.2
-
33
-
-
0024290472
-
Amino acid preferences for specific locations at the ends of α-helices
-
Richardson JS, Richardson DC. 1988. Amino acid preferences for specific locations at the ends of α-helices. Science 240:1648-1652.
-
(1988)
Science
, vol.240
, pp. 1648-1652
-
-
Richardson, J.S.1
Richardson, D.C.2
-
34
-
-
0026076664
-
Extracting hydrophobic free energies from experimental data: Relationship to protein folding and theoretical models
-
Sharp KA, Nicholls A, Friedman R, Honig B. 1991. Extracting hydrophobic free energies from experimental data: Relationship to protein folding and theoretical models. Biochemistry 30:9686-9697
-
(1991)
Biochemistry
, vol.30
, pp. 9686-9697
-
-
Sharp, K.A.1
Nicholls, A.2
Friedman, R.3
Honig, B.4
-
35
-
-
0031034930
-
Crystal structure of the src family tyrosine kinase Hck
-
Sicheri F, Moarefi I, Kuriyan J. 1997. Crystal structure of the src family tyrosine kinase Hck. Nature 385:602-609.
-
(1997)
Nature
, vol.385
, pp. 602-609
-
-
Sicheri, F.1
Moarefi, I.2
Kuriyan, J.3
-
36
-
-
0027932724
-
Poly(pro)II helices in globular proteins: Identification and circular dichroic analysis
-
Sreerama N, Woody RW. 1994. Poly(pro)II helices in globular proteins: Identification and circular dichroic analysis. Biochemistry 33:10022-10025.
-
(1994)
Biochemistry
, vol.33
, pp. 10022-10025
-
-
Sreerama, N.1
Woody, R.W.2
-
37
-
-
0029147823
-
Intrinsic phi, psi propensities of amino acids, derived from the coil regions of known structures
-
Swindells MB, MacArthur MW, Thornton JM. 1995. Intrinsic phi, psi propensities of amino acids, derived from the coil regions of known structures. Nature Struct Biol 2:596-603.
-
(1995)
Nature Struct Biol
, vol.2
, pp. 596-603
-
-
Swindells, M.B.1
MacArthur, M.W.2
Thornton, J.M.3
-
38
-
-
0021763753
-
Complete amino acid sequence of amelogenin in developing bovine enamel
-
Takagi T. Suzuki M, Baba T, Minegishi K, Sasaki S. 1984. Complete amino acid sequence of amelogenin in developing bovine enamel. Biochem Biophys Res Commun 121:592-597.
-
(1984)
Biochem Biophys Res Commun
, vol.121
, pp. 592-597
-
-
Takagi, T.1
Suzuki, M.2
Baba, T.3
Minegishi, K.4
Sasaki, S.5
-
39
-
-
0014227144
-
New chain conformations of poly(glutamic acid) and polylysine
-
Tiffany ML, Krimm S. 1968. New chain conformations of poly(glutamic acid) and polylysine. Biopolymers 6:1379-1382.
-
(1968)
Biopolymers
, vol.6
, pp. 1379-1382
-
-
Tiffany, M.L.1
Krimm, S.2
-
40
-
-
0028097921
-
The structure and function of proline-rich regions in proteins
-
Williamson MP. 1994. The structure and function of proline-rich regions in proteins. Biochem J 297:249-260.
-
(1994)
Biochem J
, vol.297
, pp. 249-260
-
-
Williamson, M.P.1
-
41
-
-
0029842116
-
Residual structure of unfolded proteins revealed by Raman optical activity
-
Wilson G, Hecht L. Barron LD. 1996. Residual structure of unfolded proteins revealed by Raman optical activity. Biochemistry 35:12518-12525.
-
(1996)
Biochemistry
, vol.35
, pp. 12518-12525
-
-
Wilson, G.1
Hecht, L.2
Barron, L.D.3
-
42
-
-
0002251831
-
Circular dichroism and conformation of unordered polypeptides
-
Woody RW. 1992. Circular dichroism and conformation of unordered polypeptides. Advan Biophys Chem 2:37-79.
-
(1992)
Advan Biophys Chem
, vol.2
, pp. 37-79
-
-
Woody, R.W.1
-
43
-
-
0031025991
-
Three-dimensional structure of the tyrosine kinase c-src
-
Xu W, Harrison SC, Eck MJ. 1997. Three-dimensional structure of the tyrosine kinase c-src. Nature 385:595-602.
-
(1997)
Nature
, vol.385
, pp. 595-602
-
-
Xu, W.1
Harrison, S.C.2
Eck, M.J.3
-
44
-
-
0028819253
-
Role of the C-terminal region of beta-amylase from barley
-
Yoshigi N, Sahara H, Koshino S. 1995. Role of the C-terminal region of beta-amylase from barley. J Biochem 117:63-67.
-
(1995)
J Biochem
, vol.117
, pp. 63-67
-
-
Yoshigi, N.1
Sahara, H.2
Koshino, S.3
|