CHD1 interacts with SSRP1 and depends on both its chromodomain and its ATPase/helicase-like domain for proper association with chromatin

Chromosoma

Volumn 108, Issue 1, 1999, Pages 10-25

  Kelley, Dawn E ^a   Stokes, David G ^a,b   Perry, Robert P ^a  

^a FOX CHASE CANCER CENTER   (United States)

^b THOMAS JEFFERSON UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATASE; DNA BINDING PROTEIN; HELICASE; HIGH MOBILITY GROUP PROTEIN; MUTANT PROTEIN; NUCLEAR PROTEIN;

ARTICLE; CHROMATIN; CONTROLLED STUDY; DNA TRANSFECTION; DROSOPHILA; HUMAN; HUMAN CELL; IMMUNOCYTOCHEMISTRY; NONHUMAN; POLYTENE CHROMOSOME; PROTEIN LOCALIZATION; PROTEIN PROTEIN INTERACTION;

ADENOSINE TRIPHOSPHATASES; AMINO ACID SEQUENCE; ANIMALS; BINDING SITES; CHROMATIN; CHROMOSOMES; DNA HELICASES; DNA-BINDING PROTEINS; DROSOPHILA; DROSOPHILA PROTEINS; HELA CELLS; HIGH MOBILITY GROUP PROTEINS; HUMANS; IMMUNOHISTOCHEMISTRY; MACROMOLECULAR SUBSTANCES; MOLECULAR SEQUENCE DATA; MUTATION; RECOMBINANT FUSION PROTEINS; TRANSCRIPTIONAL ELONGATION FACTORS; TRANSFECTION;

EID: 0032961892     PISSN: 00095915     EISSN: None     Source Type: Journal    
DOI: 10.1007/s004120050347     Document Type: Article

References (38)

1. Aasland R, Stewart AF (1995) The chromo shadow domain, a second chromo domain in heterochromatin-binding protein 1, HP1. Nucleic Acids Res 23:3168-3173
2. Abmayr SM, Workman JL (1993) Preparation of nuclear and cytoplasmic extracts from mammalian cells. In: Ausubel FM, Brent R, Kingston R, et al (eds) Current protocols in molecular biology. John Wiley and Sons, New York, NY, pp 12.1.1-12.1.9
3. Bruhn SL, Pil PM, Essigmann JM, Housman DE, Lippard SJ (1992) Isolation and characterization of human cDNA clones encoding a high mobility group box protein that recognizes structural distortions to DNA caused by binding of the anticancer agent cisplatin. Proc Natl Acad Sci USA 89:2307-2311
4. Bruhn SL, Housman DE, Lippard SJ (1993) Isolation and characterization of cDNA clones encoding the Drosophila homolog of the HMG-box SSRP family that recognizes specific DNA structures. Nucleic Acids Res 21:1643-1646
5. Cairns BR, Lorch Y, Li Y, Zhang M, Lacomis L, Erdjument-Bromage H, Tempst P, Du J, Laurent B, Kornberg RD (1996) RSC, an essential, abundant chromatin-remodeling complex. Cell 87:1249-1260
6. Chaudhary N, McMahon C, Blobel G (1991) Primary structure of a human arginine-rich nuclear protein that colocalizes with spliceosome components. Proc Natl Acad Sci USA 88:8189-8193
7. Delmas V, Stokes DG, Perry RP (1993) A mammalian DNA binding protein that contains a chromodomain and an SNF2/SWI2-like helicase domain. Proc Natl Acad Sci USA 90:2414-2418
8. Dyer MA, Hayes PJ, Baron MH (1998) The HMG domain protein SSRP1/PREIIBF is involved in activation of the human embryonic β-like globin gene. Mol Cell Biol 18:2617-2628
9. Funahashi J-I, Sekido R, Murai K, Kamachi Y, Kondoh H (1993) δ-crystallin enhancer binding protein δEF1 is a zinc finger-homeodomain protein implicated in postgastrulation embryogenesis. Development 119:433-446
10. Gautier T, Bergès T, Tollervey D, Hurt E (1997) Nucleolar KKE/D repeat proteins Nop56p and Nop58p interact with Nop1p and are required for ribosome biogenesis. Mol Cell Biol 17:7088-7098
11. Golemis EA, Gyuris J, Brent R (1996) Interaction trap/two-hybrid system to identify interacting proteins. In: Ausubel FM, Brent R, Kingston R, et al (eds) Current protocols in molecular biology. John Wiley and Sons, New York, NY, pp 20.1.1-20.1.28
12. Jin YH, Yoo EJ, Jang YK, Kim SH, Kim MJ, Shim YS, Lee JS, Choi IS, Seong RH, Hong SH, Park SD (1998) Isolation and characterization of hrp1+, a new member of the SNF2/SWI2 gene family from the fission yeast Schizosaccharomyces pombe. Mol Gen Genet 257:319-329
13. Khazak V, Estojak J, Cho H, Majors J, Sonoda G, Testa JR, Golemis EA (1998) Analysis of the interaction of the novel RNA polymerase II (pol II) subunit hsRPB4 with its partner hsRPB7 and with pol II. Mol Cell Biol 18:1935-1945
14. Kingston RE, Bunker CA, Imbalzano AN (1996) Repression and activation by multiprotein complexes that alter chromatin structure. Genes Dev 10:905-920
15. Koonin EV, Zhou S, Lucchesi JC (1995) The chromo superfamily: new members, duplication of the chromo domain and possible role in delivering transcription regulators to chromatin. Nucleic Acids Res 23:4229-4233
16. Le Douarin B, Nielsen AL, Garnier J-M, Ichinose H, Jeanmougin F, Losson R, Chambon P (1996) A possible involvement of TIF1α and TIF1β in the epigenetic control of transcription by nuclear receptors. EMBO J 15:6701-6715
17. Lehming N, Le Saux A, Schüller J, Ptashne M (1998) Chromatin components as part of a putative transcriptional repressing complex. Proc Natl Acad Sci USA 95:7322-7326
18. Mader S, White JH (1993) A steroid-inducible promoter for the controlled overexpression of cloned genes in eukaryotic cells. Proc Natl Acad Sci USA 90:5603-5607
19. Messmer S, Franke A, Paro R (1992) Analysis of the functional role of the Polycomb chromo domain in Drosophila melanogaster. Genes Dev 6:1241-1254
20. Paro R (1993) Mechanisms of heritable gene repression during development of Drosophila. Curr Opin Cell Biol 5:999-1005
21. Pazin MJ, Kadonaga JT (1997) SWI2/SNF2 and related proteins: ATP-driven motors that disrupt protein-DNA interactions? Cell 88:737-740
22. Platero JS, Hartnett T, Eissenberg JC (1995) Functional analysis of the chromo domain of HP1. EMBO J 14:3977-3986
23. Schaar BT, Chan GKT, Maddox P, Salmon ED, Yen TJ (1997) CENP-E function at kinetochores is essential for chromosome alignment. J Cell Biol 139:1373-1382
24. Seller J-S, Marchio A, Sitterlin D, Transy C, Dejean A (1998) Interaction of SP100 with HP1 proteins: a link between the promyelocytic leukemia-associated nuclear bodies and the chromatin compartment. Proc Natl Acad Sci USA 95:7316-7321
25. Sheay W, Nelson S, Martinez I, Chu TH, Bhatia S, Dornburg R (1993) Downstream insertion of the adenovirus tripartite leader sequence enhances expression in universal eukaryotic vectors. Biotechniques 15:856-862
26. Shirakata M, Hüppi K, Usuda S, Okazaki K, Yoshida K, Sakano H (1991) HMG1-related DNA-binding protein isolated with V-(D)-J recombination signal probes. Mol Cell Biol 11:4528-4536
27. Steger DJ, Owen-Hughes T, John S, Workman JL (1997) Analysis of transcription factor-mediated remodeling of nucleosomal arrays in a purified system. Methods 12:276-285
28. Stokes DG, Perry RP (1995) The DNA-binding and chromatin-localization properties of CHD1. Mol Cell Biol 15:2745-2753
29. Stokes DG, Tartof KD, Perry RP (1996) CHD1 is concentrated in interbands and puffed regions of Drosophila polytene chromosomes. Proc Natl Acad Sci USA 93:7137-7142
30. Strutt H, Paro R (1997) The polycomb group protein complex of Drosophila melanogaster has different compositions at different target genes. Mol Cell Biol 17:6773-6783
31. Tsukiyama T, Wu C (1997) Chromatin remodeling and transcription. Curr Opin Genet Dev 7:182-191
32. Wade PA, Jones PL, Vermaak D, Wolffe AP (1998) A multiple subunit Mi-2 histone deacetylase from Xenopus laevis cofractionates with an associated Snf2 superfamily ATPase. Curr Biol 8:843-846
33. Wang L, Precht P, Balakir R, Horton WE Jr (1993) Rat and chick cDNA clones encoding HMG-like proteins. Nucleic Acids Res 21:1493
34. Wang W, Xue Y, Zhou S, Kuo A, Cairns BR, Crabtree GR (1996) Diversity and specialization of mammalian SWI/SNF complexes. Genes Dev 10:2117-2130
35. Wang W, Chi T, Xue Y, Zhou S, Kuo A, Crabtree GR (1998) Architectural DNA binding by a high-mobility-group/kinesin-like subunit in mammalian SWI/SNF-related complexes. Proc Natl Acad Sci USA 95:492-498
36. Woodage T, Basrai MA, Baxevanis AD, Hieter P, Collins FS (1997) Characterization of the CHD family of proteins. Proc Natl Acad Sci USA 94:11472-11477
37. Yamaguchi-Shinozaki K, Shinozaki K (1992) A novel Arabidopsis DNA binding protein contains the conserved motif of HMG-box proteins. Nucleic Acids Res 20:6737
38. Zhang W-J, Wu JY (1996) Functional properties of p54, a novel SR protein active in constitutive and alternative splicing. Mol Cell Biol 16:5400-5408