Coevolution of the mammalian chemokines and their receptors

Immunogenetics

Volumn 49, Issue 2, 1999, Pages 115-124

  Hughes, Austin L ^a   Yeager, Meredith ^a  

^a PENNSYLVANIA STATE UNIVERSITY   (United States)

Author keywords

Coevolution; Mammalian cytokines; Receptors

Indexed keywords

CHEMOKINE; CHEMOKINE RECEPTOR; EOTAXIN; MACROPHAGE INFLAMMATORY PROTEIN 1ALPHA; MACROPHAGE INFLAMMATORY PROTEIN 1BETA; MONOCYTE CHEMOTACTIC PROTEIN 1; MONOCYTE CHEMOTACTIC PROTEIN 2; MONOCYTE CHEMOTACTIC PROTEIN 3; MONOCYTE CHEMOTACTIC PROTEIN 4; RANTES;

AMINO ACID SEQUENCE; ARTICLE; GENE CLUSTER; HUMAN; IMMUNOGENETICS; MAMMAL; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; UNINDEXED SEQUENCE;

AMINO ACID SEQUENCE; ANIMALS; ARTIODACTYLA; CATS; CATTLE; CHEMOKINES; CHEMOKINES, CC; EVOLUTION, MOLECULAR; GUINEA PIGS; HUMANS; MICE; MOLECULAR SEQUENCE DATA; MULTIGENE FAMILY; PHYLOGENY; PRIMATES; RABBITS; RATS; RECEPTORS, CHEMOKINE;

MAMMALIA;

EID: 0032958028     PISSN: 00937711     EISSN: None     Source Type: Journal    
DOI: 10.1007/s002510050470     Document Type: Article

References (32)

1. Alkhatib G, Ahuja SS, Light D, Mummidi S, Berger EA, Ahuja SK (1997) CC chemokine receptor S-mediated signaling and HIV-1 co-receptor activity share common structural determinants. J Biol Chem 272:19771-19776
2. Baggiolini M, Deward B, Moser, B (1994) Interleukin-8 and related chemotactic cytokines - CXCAnd CC chemokines. Adv Immunol 55:97-197
3. Baldwin ET, Weber IT, St. Charles R, Xuan J-C, Appella E, Yamada M, Matsushima K, Edwards BFP, Clore GM, Groneborn AM, Wlodawer A (1991) Crystal structure of Interleukin 8:symbiosis of NMR and crystallography. Proc Natl Acad Sci USA 88:502-506
4. Boring K, Gosling J, Monteclaro FS, Lusis AJ, Tsou C-L., Charo IF (1996) Molecular cloning and functional expression of murine JE (monocyte chemoattractant protein 1) and murine macrophage inflammatory protein 1α receptors. J Biol Chem 271:7551-7558
5. Chung C, Cooke RM., Proudfoot AEI (1995) The three-dimensional structure of RANTES. Biochemistry 34:9307-9314
6. Clore GM, Gronenborn AM (1995) Three-dimensional structures of α and β chemokines. FASEB J 9:57-62
7. Clore GM, Appella E, Yamada M, Matsushima K., Gronenborn AM (1990) Three-dimensional structure of interleukin 8 in solution. Biochemistry 29:1689-1696
8. Deng H., Liu R., Ellmeier W, Choe S, Unutmaz D, Burkhart M, Di Marzio P, Marmon S, Sutton RE, Hill CM, Davis CB, Peiper SC, Schall TJ, Littman DR, Landau NR (1996) Identification of a major co-receptor for primary isolates of IIIV-1. Nature 381: 661-666
9. Doolittle RF (1994) Convergent evolution: the need to be explicit. Trends Biochem Sci 19:15-18
10. + cells is mediated by the chemokine receptor CC-CKR-5. Nature 381:667-673
11. Feng Y, Broder CC, Kennedy PE, Berger, EA (1996) HIV-1 entry cofactor: functional cDNA cloning of a seven-transmembrane, G protein-coupled receptor. Science 272:872-877
12. Higgins DG, Bleasby AJ, Fuchs R (1992) Clustal V: improved software for multiple sequence alignment. Comput Appl Biosci 8:189-191
13. Hughes AL (1993a) Nonlinear relationships among evolutionary rates identify regions of functional divergence in heat-shock protein 70 genes. Mol Biol Evol 10:243-255
14. Hughes AL (1993b) Contrasting evolutionary rates in the duplicate chaperonin genes of Mycobacterium tuberculosis and M. leprae. Mol Biol Evol 10:1343-1359
15. Kim K-S, Rajarathnam K, Clark-Lewis I, Sykes BD (1996) Structural characterization of a monomeric chemokine: monocyte chemoattractant protein-3. FEBS Lett 395: 277-282
16. Kornegay JR, Schilling, JW, Wilson, AC (1994) Molecular adaptation of a leaf-eating bird: stomach lysozyme of the hoatzin. Mol Biol Evol 11:921-928
17. Lodi PJ, Garrett DS, Kuszewski J, Tsaug, M L-S, Weatherbee JA, Leonard WJ, Gronenborn AM, Clore GM (1994) High-resolution solution structure of the β chemokine hMIP-1β by multidimensional NMR. Science 263:1762-1767
18. Miller MD, Krangel MS (1992) Biology and biochemistry of the chemokines: a family of chemotactic and inflammatory cytokines. Crit Rev Immunol 12: 17-46
19. Nei M (1987) Molecular evolutionary genetics. Columbia University Press, New York
20. Nei M, Gojobori T (1986) Simple methods for estimating the number of synonymous and nonsynonymous substitutions. Mol Biol Evol 3:418-426
21. Nei M, Jin L (1989) Variances of the average numbers of nucleotide substitutions within and between populations. Mol Biol Evol 6:290-300
22. Pal R, Garzino-Demo A, Markham PD, Burns J, Brown M, Gallo RC, DeVico AL (1997) Inhibition of HIV-1 infection by the β-chemokine MDC. Science 278:695-698
23. Paolini JF, Willard D, Consler T, Luther M., Krangel MS (1994) The chemokines IL-8, monocyte chemoattractant protein-1, and I-309 are monomers at physiologically relevant concentration. J Immunol 153:2704-2717
24. Probst WC, Snyder LA, Schuster DI, Brosius J, Sealfon SC (1992) Sequence alignment of the G-protein coupled receptor superfamily. DNA Cell Biol 11:1-20
25. Rzhetsky A, Nei M (1992) A simple method for estimating and testing minimum evolution trees. Mol Biol Evol 9:945-967
26. St. Charles R, Walz DA, Edwards BFP (1989) The three-dimensional structure of bovine platelet factor 4 at 3.0-A resolution. J Biol Chem 254:2092-2099
27. Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4:406-425
28. Samson M, La Rosa G, Libert F, Paindavoine P, Detheux M, Vassart G, Parmentier, M (1997) The second extracellular loop of CCR5 is the major determinant of ligand specificity. J Biol Chem 272:24934-24941
29. Vaddi K, Keller M, Newton RC (1997) The chemokine factsbook. Academic Press, San Diego
30. Yang Z, Kumar S, Nei M (1995) A new method of inference of ancestral nucleotide and amino acid sequences. Genetics 141:1641-1650
31. Yeager M, Kumar S, Hughes AL (1997) Sequence convergence in the peptide-binding region of primate and rodent MHC class Ib molecules. Mol Biol Evol 14:1035-1041
32. Yokoyama R, Yokoyama S (1990) Convergent evolution of the red-and green-like visual pigment genes in fish. Proc Natl Acad Sci USA 87:9315-9318