Quaternary changes in topoisomerase II may direct orthogonal movement of two DNA strands

Nature Structural Biology

Volumn 6, Issue 4, 1999, Pages 322-326

  Pass, Deborah ^a,b   Bogden, Cynthia E ^a   Berger, James M ^c  

^a WHITEHEAD INSTITUTE FOR BIOMEDICAL RESEARCH   (United States)

^b WEIZMANN INSTITUTE OF SCIENCE   (Israel)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CYCLIC AMP BINDING PROTEIN; DNA TOPOISOMERASE (ATP HYDROLYSING);

ARTICLE; CONFORMATIONAL TRANSITION; CRYSTALLIZATION; DNA CLEAVAGE; DNA STRAND; PRIORITY JOURNAL; PROTEIN QUATERNARY STRUCTURE; SACCHAROMYCES CEREVISIAE; STEREOCHEMISTRY; STRUCTURE ANALYSIS; X RAY CRYSTALLOGRAPHY;

BINDING SITES; CRYSTALLOGRAPHY, X-RAY; DNA; DNA TOPOISOMERASES, TYPE II; MODELS, MOLECULAR; MOVEMENT; PROTEIN CONFORMATION;

EID: 0032947158     PISSN: 10728368     EISSN: None     Source Type: Journal    
DOI: 10.1038/7556     Document Type: Article

References (33)

1. Wang, J.C. in Annu. Rev. Biochem. vol. 65, pp. 635-692 (1996).
2. Lynn, R., Giaver. G., Swanberg, S.L. S Wang, J.C. Science 233, 647-649 (1986).
3. Wigley, D.B., Davies, G.J., Dodson, E.J., Maxwell, A. & Dodson, G. Nature 351. 624-629(1991).
4. Roca, J.R. & Wang, J.C. CelITt. 833-840 (1992).
5. All. JA, Jackson, A.P., Howells, A.J. & Maxwell, A. Biochemistry 32.2717-2724 (1993).
6. Horowitz, D.S. & Wang, J.C. S. Biol. Chem. 262. 5339-5344 (1987).
7. Worland, S.T. & Wang, J.C. 1. Biol. Chem. 264, 4412-416(1989).
8. Yoshida, H., Bogaki, M., Nakamura, M., Ya, L.M. & Nakamura, S. Antimicrob. Agents Chemother. 35, 1647-1650 (1991).
9. Wasserman, R.A. & Wang, l.C.J. Biol. Chem. 269, 20943-20951 (1994).
10. Reece, R.J. & Maxwell, A. J. Biol. Chem. 264, 19548-19653 (1989).
11. Berger, J.M., Gamblin, S.J., Harrison, S.C. S Wang, J.C. Nature 379, 225-232 (1996).
12. Cabrai, J.H.M. eta/. Nature388, 903-906(1997).
13. Branden, C. & Tooze, J. Introduction to protein structure. (Garland Publishing, New York; 1991).
14. Berger, J.M., Pass, D., Wang, J.C S Harrison, S.C. Proc. Natl. Acad. So. USA 95, 7876-7881 (1998).
15. Schultz. S.C, Shields, G.C. & Steitz, T.A. Science 253, 1001-1007 (1991).
16. Lindsley, J.E. & Wang, J.C. Proc. Nat. Acad. Scl. USA 88, 10485-10489 (1991).
17. Li, W. & Wang, J.C. J. Biol. Chem. 272.31190-31195 (1997).
18. Lima, CD., Wang, J.C & Mondragon, A. Mature 367, 138-146 (1994).
19. Caron, P.R. & Wang, J.C. Molecular biology of DNA topoisomerases and its application to chemotherapy, (eds. Andoh, T., Ikeda, H. & Oguro, M.) 1-18 (CRC Press, Boca Raton; 1993).
20. Xu, Z., Norwich, A.L & Sigler, P.B. Wature 388, 741-750 (1997).
21. Vonrhein, C., Schlauderer, G.J. & Schulz. G.E. Structure 3, 483-490 (1995).
22. Holmes, K.C. Curr. Opin. Struct Biol. 6, 781-789 (1996).
23. Otwinowski, Z. & Minor, W. Methods Enzymol. 276, 472-494 (1997).
24. Collaborative Computational Project Number 4, Acta Crystallogr. D 50, 760-763 (1994).
25. Fortelle, E. d.-L. & Bricogne, G. Methods Enzymol. 276, 472-494 (1997).
26. Abrahams, J.P. & Leslie, A.G.W. Acta Crystallogr. D 52.30-42 (1996).
27. Navaza, J. Acta Cryst. D SO. 1507-1516 (1994).
28. Jones, TA, Zou, J.Y, Cowan, S.W. & Kjeldgaard, M. Acta Crystallogr. A47.110-119 (1991).
29. Brunger, A.T. XPLOR (Version 3.1): A system for X-ray Crystallography and NMR (Yale University Press, New Haven, Connecticut; 1993).
30. Laskowski, R.A., MacArthur, M.W., Moss, D.S. & Thomton, J.M. J. Appl. Crystallogr. 26, 283(1993).
31. Kraulis, P. J. Appl. Crystallogr. 24, 946-950 (1991).
32. Carson, M. J. Appl. Crystallogr. 24, 958-961 (1991).
33. Nicholls, A., Sharp, K.A. & Honig, B. Proteins Struct Funct Genet 11, 281-296 (1991).