The genes coding for the hsp70(dnaK) molecular chaperone machine occur in the moderate thermophilic archaeon Methanosarcina thermophila TM-1

Gene

Volumn 238, Issue 2, 1999, Pages 387-395

  Hofman Bang, Jacob ^a   Lange, Marianne ^a   Conway De Macario, Everly ^b   Macario, Alberto J L ^b   Ahring, Birgitte K ^a,c  

^a TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

^b WADSWORTH CENTER   (United States)

^c UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

GrpE; Heat shock; hsp40(dnaJ); Stress genes

Indexed keywords

AMMONIA; CHAPERONE; HEAT SHOCK PROTEIN; HEAT SHOCK PROTEIN 40; UNCLASSIFIED DRUG;

ARCHAEBACTERIUM; ARTICLE; BIOREACTOR; CONTROLLED STUDY; EVOLUTION; HEAT SHOCK; METHANOSARCINA; NONHUMAN; PRIORITY JOURNAL; STRESS;

AMINO ACID SEQUENCE; AMMONIA; BASE SEQUENCE; CLONING, MOLECULAR; DNA PRIMERS; GENES, ARCHAEAL; HSP70 HEAT-SHOCK PROTEINS; METHANOSARCINA; MOLECULAR SEQUENCE DATA; OXIDATIVE STRESS; SEQUENCE HOMOLOGY, AMINO ACID;

ARCHAEA; METHANOBACTERIUM; METHANOSARCINA MAZEI; METHANOSARCINA MAZEI S-6; METHANOSARCINA THERMOPHILA; METHANOTHERMOBACTER THERMAUTOTROPHICUS; NEGIBACTERIA; POSIBACTERIA; PROKARYOTA;

EID: 0032878862     PISSN: 03781119     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0378-1119(99)00343-1     Document Type: Article

References (30)

1. Angelidaki I., Ahring B.K. Anaerobic thermophilic digestion of manure at different ammonia loads: effect of temperature. Water Res. 28:1994;727-731.
2. Angelidaki I., Petersen S.P., Ahring B.K. Effects of lipids on thermophilic anaerobic digestion and reduction of lipid inhibition upon addition of bentonite. Appl. Microbiol. Biotechnol. 33:1990;469-472.
3. Ausubel F.M., Brent R., Kingston R.E., Moore D.D., Seidman J.G., Smith J.A., Struhl K. Current Protocols in Molecular Biology. 1998;John Wiley, New York.
4. Boone D.R., Whitman W.B., Rouviere P. Diversity and taxonomy of methanogens. Ferry J.G. Methanogenesis. 1993;35-80 Chapman and Hall, New York.
5. Bustard K., Gupta R.S. The sequence of heat shock protein 40 (DnaJ) homologs provides evidence for a close evolutionary relationship between the Deinococcus-Thermus group and cyanobacteria. J. Mol. Evol. 45:1997;193-205.
6. Chomczynski P., Sacchi N. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162:1987;156-159.
7. T, MC3 and LYC. Curr. Microbiol. 26:1993;167-174.
8. Clarens M., Macario A.J.L., Conway de Macario E. The archaeal dnaK-dnaJ gene cluster: organization and expression in the methanogen Methanosarcina mazei. J. Mol. Biol. 250:1995;191-201.
9. Conway de Macario E., Clarens M., Macario A.J.L. Archaeal grpE: transcription in two different morphologic stages of Methanosarcina mazei and comparison with dnaK and dnaJ. J. Bacteriol. 177:1995;544-550.
10. Conway de Macario E., Dugan C.B., Macario A.J.L. Identification of a grpE heat-shock gene homolog in the archaeon Methanosarcina mazei. J. Mol. Biol. 240:1994;95-101.
11. Conway de Macario E., Macario A.J.L. Transcription of the archaeal trkA homolog in Methanosarcina mazei S-6. J. Bacteriol. 177:1995;6077-6082.
12. Gribaldo S., Lumia V., Creti R., Conway de Macario E., Sanangelantoni A., Cammarano P. Occurrence of the hsp70(dnaK) gene among archaea and sequence features of HSP70 suggest a novel outlook on phylogenies inferred from this protein. J. Bacteriol. 181:1999;434-443.
13. Gupta R., Singh S.B. Phylogenetic analysis of 70 kD heat shock protein sequences suggests a chimeric origin for the eukaryotic cell nucleus. Curr. Biol. 4:1994;1104-1114.
14. Hartl F.U., Martin J. Molecular chaperones in cellular protein folding. Curr. Opin. Struct. Biol. 5:1995;92-102.
15. Koster I.W., Koomen E. Ammonia inhibition of the maximum growth rate (μm) of hydrogenotrophic methanogens at various pH-levels and temperatures. Appl. Microbiol. Biotechnol. 28:1988;500-505.
16. Koster I.W., Lettinga G. Anaerobic digestion at extreme ammonia concentrations. Biol. Wastes. 25:1988;51-59.
17. Lange M., Macario A.J.L., Ahring B.K., Conway de Macario E. Heat-shock response in Methanosarcina mazei S-6. Curr. Microbiol. 35:1997;116-121.
18. Lange M., Macario A.J.L., Ahring B.K., Conway de Macario E. Increased transcripts of the dnaK locus genes in Methanosarcina mazei S-6 exposed to supraoptimal concentrations of ammonia. FEMS Microbiol. Lett. 152:1997;379-384.
19. Macario A.J.L., Conway de Macario E. Stress genes: an introductory overview. Stress. 1:1997;123-134.
20. Macario A.J.L., Conway de Macario E. The archaeal molecular chaperone machine: peculiarities and paradoxes. Genetics. 152:1999;1277-1283.
21. Macario A.J.L., Lange M., Ahring B.K., Conway de Macario E. Stress genes and proteins in archaea. Microbiol. Mol. Biol. Rev. 1999;. in press.
22. +-uptake system of Vibrio alginolyticus. Microbiology. 144:1998;2281-2289.
23. Netzer W.J., Hartl F.U. Protein folding in the cytosol: chaperonin-dependent and -independent mechanisms. Trends Biochem. Sci. 23:1998;68-73.
24. Rensing S.A., Maier U.-G. Phylogenetic analysis of the stress-70 protein family. J. Mol. Evol. 39:1994;80-86.
25. + in bacterial transport. Mol. Microbiol. 9:1993;533-543.
26. Schmidt J.E., Ahring B.K. Granular sludge formation in upflow anaerobic sludge blanket (UASB) reactors. Biotechnol. Bioeng. 49:1993;229-246.
27. Smith D.R., et al. Complete genome sequence of Methanobacterium thermoautotrophicum ΔH: functional analysis and comparative genomics. J. Bacteriol. 179:1997;7135-7155.
28. Sprott G., Patel G. Ammonia toxicity in pure cultures of methanogenic bacteria. Syst. Appl. Microbiol. 7:1986;358-363.
29. Zillig W., Palm P, Klenk H.-P., Langer D., Hüdephol U., Hain J., Lazendörfer M., Holz L. Transcription in archaea. Kates M., Kushner D.J., Matheson A.T. The Biochemistry of Archaea. 1993;367-391 Elsevier, Amsterdam.
30. Zinder S. Physiological ecology of methanogens. Ferry G. Methanogenesis. 1993;128-206 Chapman and Hall, New York.