Molecular diagnostics on microfabricated electrophoretic devices: From slab gel- to capillary- to microchip-based assays for T- and B-cell lymphoproliferative disorders

Clinical Chemistry

Volumn 45, Issue 11, 1999, Pages 1906-1917

  Munro, Nicole J ^a   Snow, Karen ^b   Kant, Jeffrey A ^c   Landers, James P ^a,d,e  

^a UNIVERSITY OF PITTSBURGH   (United States)

^b MAYO CLINIC   (United States)

^c UNIVERSITY OF PITTSBURGH MEDICAL CENTER   (United States)

^d UNIVERSITY OF PITTSBURGH CANCER INSTITUTE   (United States)

^e UNIVERSITY OF VIRGINIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

POVIDONE; T LYMPHOCYTE RECEPTOR;

ARTICLE; B LYMPHOCYTE; CAPILLARY ELECTROPHORESIS; DNA SEQUENCE; GEL ELECTROPHORESIS; INSTRUMENTATION; LYMPHOPROLIFERATIVE DISEASE; MOLECULAR BIOLOGY; MOLECULAR CLONING; POLYMERASE CHAIN REACTION; T LYMPHOCYTE;

EID: 0032754872     PISSN: 00099147     EISSN: None     Source Type: Journal    
DOI: 10.1093/clinchem/45.11.1906     Document Type: Article

References (38)

1. 1. Rapley R, Theophilus BD, Bevan IS, Walker MR. Fundamentals of the polymerase chain reaction - a future in clinical diagnostics. Med Lab Sci 1992;49:119-28.
2. 2. Reiss J. The polymerase chain reaction and its potential role in clinical diagnostics and research. J Intern Med 1991;230:391-5.
3. 3. Oda RP, Bush VJ, Landers JP. Clinical applications of capillary electrophoresis. In: Landers JP, ed. Handbook of capillary electrophoresis, 2nd ed. Boca Raton: CRC Press, 1997:639-73.
4. 4. Huang XC, Quesada MA, Mathies RA. Capillary array electrophoresis using laser-excited confocal fluorescence detection. Anal Chem 1992;64:967-72.
5. 5. Woolley AT, Hadley D, Landre P, deMello AJ, Mathies RA, Northrup MA. Functional integration of PCR amplification and capillary electrophoresis in a microfabricated DNA analysis device. Anal Chem 1996;68:4081-6.
6. 6. Kopp MU, de Mello AJ, Manz A. Chemical amplification: continuous-flow PCR on a chip. Science 1998;280:1046-8.
7. 7. Shoffner MA, Cheng J, Hvichia GE, Kricka LJ, Wilding P. Chip PCR. I. Surface passivation of microfabricated silicon-glass chips for PCR. Nucleic Acids Res 1996;24:375-9.
8. 8. Burns MA, Johnson BN, Brahmasandra SN, Handique K, Webster JR, Krishnan M, et al. An integrated nanoliter DNA analysis device. Science 1998;282:484-7.
9. 9. Colyer CL, Tang T, Chiem N, Harrison DJ. Clinical potential of microchip capillary electrophoresis systems. Electrophoresis 1997;18:1733-41.
10. 10. Colyer CL, Mangru SD, Harrison DJ. Microchip-based capillary electrophoresis of human serum. J Chromatogr A 1997;781: 271-6.
11. 11. Chiem N, Harrison DJ. Microchip-based capillary electrophoresis for immunoassays: analysis of monoclonal antibodies and theophylline. Anal Chem 1997;69:373-8.
12. 12. Koutny LB, Schmalzing D, Taylor TA, Fuchs M. Microchip electrophoretic immunoassay for serum cortisol. Anal Chem 1996;68: 18-22.
13. 13. von Heeren F, Verpoorte E, Manz A, Thormann W. Micellar electrokinetic chromatography separations and analyses of biological samples on a cyclic planar microstructure. Anal Chem 1996;68:2044-53.
14. 14. Cheng J, Waters LC, Fortina P, Hvichia G, Jacobson SC, Ramsey JM, et al. Degenerate oligonucleotide primed-polymerase chain reaction and capillary electrophoresis analysis of human DNA on microchip-based devices. Anal Biochem 1998;257:101-6.
15. 15. Schmalzing D, Adourian A, Koutny L, Ziaugra L, Matsudaira P, Ehrlich D. DNA sequencing on microfabricated electrophoretic devices. Anal Chem 1998;70:2303-10.
16. 16. Hofmann O, Che D, Cruickshank KA, Müller UR. Adaptation of capillary isoelectric focusing to microchannels on a glass chip. Anal Chem 1999;71:678-86.
17. 17. Rodriguez I, Zhang Y, Lee HK, Li SFY. Conventional capillary electrophoresis in comparison with short-capillary capillary electrophoresis and microfabricated glass chip capillary electrophoresis for the analysis of fluorescein isothiocyanate anti-human immunoglobulin G. J Chromatogr A 1997;781:287-93.
18. 18. Walker PA, Morris MD, Burns MA, Johnson BN. Isotachophoretic separations on a microchip-normal Raman spectroscopy detection. Anal Chem 1998;70:3766-9.
19. 19. McCormick RM, Nelson RJ, Alonso-Amigo MG, Benvegnu DJ, Hooper HH. Microchannel electrophoretic separations of DNA in injection-molded plastic substrates. Anal Chem 1997;69:2626-30.
20. 20. Trainor KJ, Brisco MJ, Wan JH, Neoh S, Grist S, Morley AA. Gene rearrangement in B-and T-lymphoproliferative disease detected by the polymerase chain reaction. Blood 1991;78:192-6.
21. 21. Coad JE, Olson DJ, Lander TA, McGlennen RC. Molecular assessment of clonality in lymphoproliferative disorders. II. T-cell receptor gene rearrangements. Mol Diagn 1997;2:69-81.
22. 22. Rezuke WN, Abernathy EC, Tsongalis GJ. Molecular diagnosis of B-and T-cell lymphomas: fundamental principles and clinical applications. Clin Chem 1997;43:1814-23.
23. 23. Tian H, Huhmer AFR, Landers JP. New vistas in clinical diagnostics: from capillary electrophoresis to rapid diagnostics on glass chips. Curr Top Anal Chem 1998;1:171-89.
24. 24. Oda RP, Wick MJ, Rueckert LM, Lust JA, Landers JP. Evaluation of capillary electrophoresis in polymer solutions with laser-induced fluorescence detection for the automated detection of T-cell gene rearrangements in lymphoproliferative disorders. Electrophoresis 1996;17:1491-8.
25. 25. Ocvirk G, Tang T, Harrison DJ. Optimization of confocal epifluorescence microscopy for microchip-based miniaturized total analysis system. Analyst 1998;123:1429-34.
26. 26. Hjertén S. High-performance electrophoresis: elimination of electroendoosmosis and solute adsorption. J Chromatogr 1985;347: 191-8.
27. 27. Gao Q, Yeung ES. A matrix for DNA separation: genotyping and sequencing using poly (vinylpyrrolidone) solution in uncoated capillaries. Anal Chem 1998;70:1382-8.
28. 28. Lust JA. Molecular genetics and lymphoproliferative disorders. J Clin Lab Anal 1996;10:359-67.
29. 29. Snyder LR, Kirkland JJ. Introduction to modern liquid chromatography, 2nd ed, New York: Wiley Interscience, 1979:863pp.
30. 30. Ulfelder KJ, Schwartz HE, Hall JM, Sunzeri FJ. Restriction fragment length polymorphism analysis of ERBB2 oncogene by capillary electrophoresis. Anal Biochem 1992;200:260-7.
31. 31. Guttman A, Schwartz JE. Artifacts related to sample introduction in CE affecting separation performance and quantitation. Anal Chem 1995;67:2279-83.
32. 32. Pancholi P, Oda RP, Mitchell PS, Landers JP, Persing DH. Diagnostic detection of herpes simplex and hepatitis C viral amplicons by capillary electrophoresis: comparison with Southern blot detection. Mol Diagn 1997;2:27-37.
33. 33. Wooley AT, Sensabaugh GF, Mathies RA. High-speed DNA genotyping using microfabricated capillary array electrophoresis chips. Anal Chem 1997;69:2181-6.
34. 34. Wooley AT, Mathies RA. Ultra-high-speed DNA fragment separations using microfabricated capillary array electrophoresis chips. Proc Natl Acad Sci U S A 1994;91:11348-52.
35. 35. Höfgartner WT, Hühmer AFR, Landers JP, Kant JA. Rapid diagnosis of herpes simplex encephalitis using microchip Electrophoresis of PCR products. Clin Chem 1999;45:in press.
36. 36. Braun B, Blanch HW, Prausnitz JM. Capillary electrophoresis of DNA restriction fragments: effect of polymer properties. Electrophoresis 1997;18:1994-7.
37. 37. Fung EN, Yeung ES. High-speed DNA sequencing by using mixed poly (ethylene oxide) solutions in uncoated capillary columns. Anal Chem 1995;67:1913-9.
38. 38. Simpson PC, Woolley AT, Mathies RA. Microfabrication technology for the production of capillary array electrophoresis chips. J Biomed Microdevices 1998;1:7-26.