CENP-A associated complex satellite DNA in the kinetochore of the Indian muntjac

Chromosoma

Volumn 108, Issue 6, 1999, Pages 367-374

  Vafa, Omid ^a,b   Shelby, Richard D ^a   Sullivan, Kevin F ^a  

^a SCRIPPS RESEARCH INSTITUTE   (United States)

^b SALK INSTITUTE FOR BIOLOGICAL STUDIES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AUTOANTIBODY; CENTROMERE PROTEIN A; DNA BINDING PROTEIN; HISTONE H3; SATELLITE DNA; UNCLASSIFIED DRUG;

ANIMAL CELL; ARTICLE; CENTROMERE; CHROMATIN STRUCTURE; DEER; DNA SEQUENCE; FIBROBLAST; FLUORESCENCE IN SITU HYBRIDIZATION; IMMUNOPRECIPITATION; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; SEQUENCE HOMOLOGY; SOUTHERN BLOTTING;

ANIMALIA; CERVIDAE; MAMMALIA; MUNTIACUS MUNTJAK; ODOCOILEUS VIRGINIANUS;

EID: 0032732513     PISSN: 00095915     EISSN: None     Source Type: Journal    
DOI: 10.1007/s004120050388     Document Type: Article

References (53)

1. Allshire RC (1997) Centromeres, checkpoints and chromatid cohesion. Curr Opin Genet Dev 7:264-273
2. Allshire RC, Javerzat JP, Redhead NJ, Cranston G (1994) Position effect variegation at fission yeast centromeres. Cell 76:157-169
3. Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403-410
4. Barry AE, Howman EV, Cancilla MR, Saffery R, Choo KH (1999) Sequence analysis of an 80 kb human neocentromere. Hum Mol Genet 8:217-227
5. Beridze T (1982) Satellite DNA. Springer, Berlin Heidelberg New York
6. Bogenberger JM, Neumaier PS, Fittler F (1985) The muntjak satellite IA sequence is composed of 31-base-pair internal repeats that are highly homologous to the 31-base-pair subrepeats of the bovine satellite 1.715. Eur J Biochem 148:55-59
7. Bogenberger JM, Neitzel H, Fittler F (1987) A highly repetitive DNA component common to all Cervidae: its organization and chromosomal distribution during evolution. Chromosoma 95:154-161
8. Brinkley BR, Valdivia MM. Tousson A, Brenner SL (1984) Compound kinetochores of the Indian muntjac. Evolution by linear fusion of unit kinetochores. Chromosoma 91:1-11
9. Clarke L, Baum MP (1990) Functional analysis of a centromere from fission yeast: a role for centromere-specific repeated DNA sequences. Mol Cell Biol 10:1863-1872
10. Clarke L, Carbon J (1980) Isolation of a yeast centromere and construction of functional small circular chromosomes. Nature 287:504-509
11. Cooke CA. Bernat RL, Earnshaw WC (1990) CENP-B: a major human centromere protein located beneath the kinetochore. J Cell Biol 110:1475-1488
12. Csink AK, Henikoff S (1998) Something from nothing: the evolution and utility of satellite repeats. Trends Genet 14:200-204
13. Earnshaw WC, Rothfield N (1985) Identification of a family of human centromere proteins using autoimmune sera from patients with scleroderma. Chromosoma 91:313-321
14. Earnshaw WC, Sullivan KF, Machlin PS, Cooke CA, Kaiser DA, Pollard TD, Rothfield NF, Cleveland DW (1987) Molecular cloning of cDNA for CENP-B, the major human centromere autoantigen. J Cell Biol 104:817-829
15. Earnshaw WC, Ratrie H, Stellen G (1989) Visualization of centromere proteins CENP-B and CENP-C on a stable dicentric chromosome in cytological spreads. Chromosoma 98:1-12
16. Ekwall K, Olsson T, Turner BM, Cranston G, Allshire RC (1997) Transient inhibition of histone deacetylation alters the structural and functional imprint at fission yeast centromeres. Cell 91:1021-1032
17. Haaf T, Willard HF (1998) Orangutan alpha-satellite monomers are closely related to the human consensus sequence. Mamm Genome 9:440-447
18. Harrington JA, Van Bokkelen G, Mays RW, Gustashaw K, Willard HF (1997) Formation of de novo centromeres and construction of first-generation human artificial microchromosomes. Nat Genet 15:345-355
19. Ikeno M, Grimes B, Okazaki T, Nakano M, Saitoh K, Hoshino H, McGill NI, Cooke H, Masumoto H (1998) Construction of YAC-based mammalian artificial chromosomes. Nat Biotechnol 16:431-439
20. Kalitsis P, MacDonald AC, Newson AJ, Hudson DF, Choo KH (1998) Gene structure and sequence analysis of mouse centromere proteins A and C. Genomics 47:108-114
21. Karpen GH, Allshire RC (1997) The case for epigenetic effects on centromere identity and function. Trends Genet 13:489-496
22. Kingwell B, Rattner JB (1987) Mammalian kinetochore/centromere composition: a 50 kDa antigen is present in the mammalian kinetochore/centromere. Chromosoma 95:403-407
23. Lanini L, McKeon F (1995) Domains required for CENP-C assembly at the kinetochore. Mol Biol Cell 6:1049-1059
24. Lechner J, Ortiz J (1996) The Saccharomyces cerevisiae kinetochore. FEBS Lett 389:70-74
25. Lee C, Sasi R, Lin CC (1993) Interstitial localization of telomeric DNA sequences in the Indian muntjac chromosomes: further evidence for tandem chromosome fusions in the karyotypic evolution of the Asian muntjacs. Cytogenet Cell Genet 63: 156-159
26. Lee C, Court DR, Cho C, Haslett JL, Lin CC (1997) Higher-order organization of subrepeats and the evolution of cervid satellite I DNA. J Mol Evol 44:327-335
27. Lin CC, Sasi R, Fan YS. Chen ZQ (1991) New evidence for tandem chromosome fusions in the karyotypic evolution of Asian muntjacs. Chromosoma 101:19-24
28. Masumoto H, Masukata H, Muro Y, Nozaki N, Okazaki T (1989) A human centromere antigen (CENP-B) interacts with a short specific sequence in alphoid DNA, a human centromeric satellite. J Cell Biol 109:1963-1973
29. Muro Y, Masumoto H, Yoda K, Nozaki N, Ohashi M, Okazaki T (1992) Centromere protein B assembles human centromeric alpha-satellite DNA at the 17-bp sequence, CENP-B box. J Cell Biol 116:585-596
30. Murphy TD, Karpen GH (1995) Localization of centromere function in a Drosophila minichromosome. Cell 82:599-609
31. Murphy TD, Karpen GH (1998) Centromeres take flight: alpha satellite and the quest for the human centromere. Cell 93:317-320
32. Palmer DK, O'Day K, Wener MH, Andrews BS, Margolis RL (1987) A 17-kD centromere protein (CENP-A) copurifies with nucleosome core particles and with histones. J Cell Biol 104: 805-815
33. Palmer DK, O'Day K, Trong HL, Charbonneau H, Margolis RL (1991) Purification of the centromere-specific protein CENP-A and demonstration that it is a distinctive histone. Proc Natl Acad Sci U S A 88:3734-3738
34. Pluta AF, Mackay AM, Ainsztein AM, Goldberg IG, Earnshaw WC (1995) The centromere: hub of chromosomal activities. Science 270:1591-1594
35. Polizzi C, Clarke L (1991) The chromatin structure of centromeres from fission yeast: differentiation of the central core that correlates with function. J Cell Biol 112:191-201
36. Qureshi SA, Blake RD (1995) Sequence characteristics of a cervid DNA repeat family. J Mol Evol 40:400-404
37. Rieder CL, Salmon ED (1998) The vertebrate cell kinetochore and its roles during mitosis. Trends Cell Biol 8:310-318
38. Saitoh H, Tomkiel J, Cooke CA, Ratrie H, Maurer M, Rothfield NF, Earnshaw WC (1992) CENP-C, an autoantigen in scleroderma, is a component of the human inner kinetochore plate. Cell 70:115-125
39. Shelby RD, Vafa O, Sullivan KF (1997) Assembly of CENP-A into centromeric chromatin requires a cooperative array of nucleosomal DNA contact sites. J Cell Biol 136:501-513
40. Shimizu N, Kanda T, Wahl GM (1996) Selective capture of acentric fragments by micronuclei provides a rapid method for purifying extrachromosomally amplified DNA. Nat Genet 12:65-71
41. Steiner NC, Clarke L (1994) A novel epigenetic effect can alter centromere function in fission yeast. Cell 79:865-874
42. Sugimoto K, Yata H, Muro Y, Himeno M (1994) Human centromere protein C (CENP-C) is a DNA-binding protein which possesses a novel DNA-binding motif. J Biochem (Tokyo) 116:877-881
43. Sullivan KF, Glass CA (1991) CENP-B is a highly conserved mammalian centromere protein with homology to the helix-loop-helix family of proteins. Chromosoma 100:360-370
44. Sullivan KF, Hechenberger M, Masri K (1994) Human CENP-A contains a histone H3 related histone fold domain that is required for targeting to the centromere. J Cell Biol 127:581-592
45. Sun X, Wahlstrom J, Karpen GH (1997) Molecular structure of a functional Drosophila centromere. Cell 91:1007-1019
46. Tyler-Smith C, Willard HF (1993) Mammalian chromosome structure. Curr Opin Genet Dev 3:390-397
47. Vafa O, Sullivan KF (1997) Chromatin containing CENP-A and alpha-satellite DNA is a major component of the inner kinetochore plate. Curr Biol 7:897-900
48. Voullaire LE. Slater HR, Petrovic V, Choo KH (1993) A functional marker centromere with no detectable alpha-satellite, satellite III, or CENP-B protein: activation of a latent centromere? Am J Hum Genet 52:1153-1163
49. Warburton PE, Cooke CA. Bourassa S, Vafa O, Sullivan BA. Stetten G, Gimelli G, Warburton D, Tyler-Smith C, Sullivan KF, Poirier GG. Earnshaw WC (1997) Immunolocalization of CENP-A suggests a distinct nucleosome structure at the inner kinetochore plate of active centromeres. Curr Biol 7:901-904
50. Willard HF (1998) Centromeres: the missing link in the development of human artificial chromosomes. Curr Opin Genet Dev 8:219-225
51. Yang CH, Tomkiel J, Saitoh H, Johnson DH, Earnshaw WC (1996) Identification of overlapping DNA-binding and centromere-targeting domains in the human kinetochore protein CENP-C. Mol Cell Biol 16:3576-3586
52. Yoda K, Kitagawa K, Masumoto H, Muro Y, Okazaki T (1992) A human centromere protein, CENP-B. has a DNA binding domain containing four potential alpha helices at the NH2 terminus, which is separable from dimerizing activity. J Cell Biol 119:1413-1427
53. Yu LC, Lowensteiner D, Wong EF, Sawada I, Mazrimas J, Schmid C (1986) Localization and characterization of recombinant DNA clones derived from the highly repetitive DNA sequences in the Indian muntjac cells: their presence in the Chinese muntjac. Chromosoma 93:521-528