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Volumn 154, Issue 4 SUPPL., 1999, Pages

The tangled web: Gene genealogies and the origin of eukaryotes

Author keywords

Chimerism; Multiple gene genealogies; Origin of eukaryotes; Tree of life

Indexed keywords

EUKARYOTE; EVOLUTION; GENE; GENEALOGY;

EID: 0032728564     PISSN: 00030147     EISSN: None     Source Type: Journal    
DOI: 10.2307/2463982     Document Type: Article
Times cited : (27)

References (65)
  • 1
    • 0032723027 scopus 로고    scopus 로고
    • A search for the origins of animals and fungi: Comparing and combining molecular data
    • Baldauf, S. L. 1999. A search for the origins of animals and fungi: comparing and combining molecular data. American Naturalist 154(suppl.):S178-S188.
    • (1999) American Naturalist , vol.154 , Issue.SUPPL.
    • Baldauf, S.L.1
  • 2
    • 0027138675 scopus 로고
    • Animals and fungi are each other's closest relatives: Congruent evidence from multiple proteins
    • Baldauf, S. L., and J. D. Palmer. 1993. Animals and fungi are each other's closest relatives: congruent evidence from multiple proteins. Proceedings of the National Academy of Sciences of the USA 90:11558-11562.
    • (1993) Proceedings of the National Academy of Sciences of the USA , vol.90 , pp. 11558-11562
    • Baldauf, S.L.1    Palmer, J.D.2
  • 5
    • 0031587877 scopus 로고    scopus 로고
    • Ancient ciphers: Translation in Archaea
    • Dennis, P. P. 1997. Ancient ciphers: translation in Archaea. Cell 89:1007-1010.
    • (1997) Cell , vol.89 , pp. 1007-1010
    • Dennis, P.P.1
  • 8
    • 0032404453 scopus 로고    scopus 로고
    • You are what you eat: A gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes
    • Doolittle, W. F. 1998. You are what you eat: a gene transfer ratchet could account for bacterial genes in eukaryotic nuclear genomes. Trends in Genetics 14:307-311.
    • (1998) Trends in Genetics , vol.14 , pp. 307-311
    • Doolittle, W.F.1
  • 9
    • 0031221403 scopus 로고    scopus 로고
    • Trees within trees: Genes and species, molecules and morphology
    • Doyle, J. J. 1997. Trees within trees: Genes and species, molecules and morphology. Systematic Biology 46: 537-553.
    • (1997) Systematic Biology , vol.46 , pp. 537-553
    • Doyle, J.J.1
  • 10
    • 0031587829 scopus 로고    scopus 로고
    • Archaea and the origin(s) of DNA replication proteins
    • Edgell, D. R., and W. F. Doolittle. 1997. Archaea and the origin(s) of DNA replication proteins. Cell 89:995-998.
    • (1997) Cell , vol.89 , pp. 995-998
    • Edgell, D.R.1    Doolittle, W.F.2
  • 12
    • 0002375347 scopus 로고    scopus 로고
    • Gene duplications and horizontal gene transfer during early evolution
    • D. M. Roberts, P. Sharp, G. Anderson, and M. A. Collins, eds. Cambridge University Press, Cambridge
    • Gogarten, J. P., E. Hilario, and L. Olendzenski. 1996. Gene duplications and horizontal gene transfer during early evolution. Pages 267-292 in D. M. Roberts, P. Sharp, G. Anderson, and M. A. Collins, eds. Evolution of microbial life. 54th symposium of the Society for General Microbiology. Cambridge University Press, Cambridge.
    • (1996) Evolution of Microbial Life. 54th Symposium of the Society for General Microbiology , pp. 267-292
    • Gogarten, J.P.1    Hilario, E.2    Olendzenski, L.3
  • 13
    • 0028888465 scopus 로고
    • Protein-based phylogenies support a chimeric origin for the eukaryotic genome
    • Golding, G. B., and R. S. Gupta. 1995. Protein-based phylogenies support a chimeric origin for the eukaryotic genome. Molecular Biology and Evolution 12:1-6.
    • (1995) Molecular Biology and Evolution , vol.12 , pp. 1-6
    • Golding, G.B.1    Gupta, R.S.2
  • 14
    • 0027420885 scopus 로고
    • Evolution of HSP70 gene and its implications regarding relationships between archaea, eubacteria, and eukaryotes
    • Gupta, R. S., and G. B. Golding. 1993. Evolution of HSP70 gene and its implications regarding relationships between archaea, eubacteria, and eukaryotes. Journal of Molecular Evolution 37:573-582.
    • (1993) Journal of Molecular Evolution , vol.37 , pp. 573-582
    • Gupta, R.S.1    Golding, G.B.2
  • 15
    • 0029923838 scopus 로고    scopus 로고
    • The origin of the eukaryotic cell
    • _. 1996. The origin of the eukaryotic cell. Trends in Biochemical Sciences 21:166-171.
    • (1996) Trends in Biochemical Sciences , vol.21 , pp. 166-171
  • 16
    • 0026692645 scopus 로고
    • Cloning of the HSP70 gene from Halobacterium marismortui relatedness of archaebacterial HSP70 to its eubacterial homologs and model for the evolution of the HSP70 gene
    • Gupta, R. S., and B. Singh. 1992. Cloning of the HSP70 gene from Halobacterium marismortui relatedness of archaebacterial HSP70 to its eubacterial homologs and model for the evolution of the HSP70 gene. Journal of Bacteriology 174:4594-4605.
    • (1992) Journal of Bacteriology , vol.174 , pp. 4594-4605
    • Gupta, R.S.1    Singh, B.2
  • 17
    • 0028674882 scopus 로고
    • Phylogenetic analysis of 70 kD heat shock protein sequences suggests a chimeric origin for the eukaryotic cell nucleus
    • _. 1994. Phylogenetic analysis of 70 kD heat shock protein sequences suggests a chimeric origin for the eukaryotic cell nucleus. Current Biology 4:1104-1114.
    • (1994) Current Biology , vol.4 , pp. 1104-1114
  • 18
    • 0028344493 scopus 로고
    • Cloning of Giardia lamblia heat shock protein HSP70 homologs: Implications regarding origin of eukaryotic cells and of endoplasmic reticulum
    • Gupta, R. S., K. Aitken, M. Falah, and B. Singh. 1994a. Cloning of Giardia lamblia heat shock protein HSP70 homologs: Implications regarding origin of eukaryotic cells and of endoplasmic reticulum. Proceedings of the National Academy of Sciences of the USA 91: 2895-2899.
    • (1994) Proceedings of the National Academy of Sciences of the USA , vol.91 , pp. 2895-2899
    • Gupta, R.S.1    Aitken, K.2    Falah, M.3    Singh, B.4
  • 19
    • 0028543812 scopus 로고
    • HSP70 phylogeny and the relationship between archaebacteria, eubacteria, and eukaryotes
    • Gupta, R. S., G. B. Golding, and B. Singh. 1994b. HSP70 phylogeny and the relationship between archaebacteria, eubacteria, and eukaryotes. Journal of Molecular Evolution 39:537-540.
    • (1994) Journal of Molecular Evolution , vol.39 , pp. 537-540
    • Gupta, R.S.1    Golding, G.B.2    Singh, B.3
  • 20
    • 0031022823 scopus 로고    scopus 로고
    • Sequencing of heat shock protein 70 (DnaK) homologs from Deinococcus proteolyticus and Thermomicrobium roseum and their integration in a protein-based phylogeny of prokaryotes
    • Gupta, R. S., K. Bustard, M. Falah, and D. Singh. 1997. Sequencing of heat shock protein 70 (DnaK) homologs from Deinococcus proteolyticus and Thermomicrobium roseum and their integration in a protein-based phylogeny of prokaryotes. Journal of Bacteriology 179: 345-357.
    • (1997) Journal of Bacteriology , vol.179 , pp. 345-357
    • Gupta, R.S.1    Bustard, K.2    Falah, M.3    Singh, D.4
  • 22
    • 0027738868 scopus 로고
    • Horizontal transfer of ATPase genes: The tree of life becomes a net of life
    • Hilario, E., and J. P. Gogarten. 1993. Horizontal transfer of ATPase genes: the tree of life becomes a net of life. Biosystems 31:111-119.
    • (1993) Biosystems , vol.31 , pp. 111-119
    • Hilario, E.1    Gogarten, J.P.2
  • 23
    • 0024358140 scopus 로고
    • Evolutionary relationship of archaebacteria, eubacteria and eukaryotes inferred from phylogenetic trees of duplicated genes
    • Iwabe, N., K. I. Kuma, M. Hasegawa, S. Osawa, and T. Miyata. 1989. Evolutionary relationship of archaebacteria, eubacteria and eukaryotes inferred from phylogenetic trees of duplicated genes. Proceedings of the National Academy of Sciences of the USA 86: 9355-9359.
    • (1989) Proceedings of the National Academy of Sciences of the USA , vol.86 , pp. 9355-9359
    • Iwabe, N.1    Kuma, K.I.2    Hasegawa, M.3    Osawa, S.4    Miyata, T.5
  • 24
    • 0031734950 scopus 로고    scopus 로고
    • Changing perspectives on the origin of eukaryotes
    • Katz, L. A. 1998. Changing perspectives on the origin of eukaryotes. Trends in Ecology & Evolution 13:493-497.
    • (1998) Trends in Ecology & Evolution , vol.13 , pp. 493-497
    • Katz, L.A.1
  • 25
    • 0031936411 scopus 로고    scopus 로고
    • A kingdom's progress: Archezoa and the origin of eukaryotes
    • Keeling, P. J. 1998. A kingdom's progress: Archezoa and the origin of eukaryotes. Bioessays 20:87-95.
    • (1998) Bioessays , vol.20 , pp. 87-95
    • Keeling, P.J.1
  • 26
    • 0029908930 scopus 로고    scopus 로고
    • Alpha-tubulin from early-diverging eukaryotic lineages and the evolution of the tubulin family
    • Keeling, P. J., and W. F. Doolittle. 1996. Alpha-tubulin from early-diverging eukaryotic lineages and the evolution of the tubulin family. Molecular Biology and Evolution 13:1297-1305.
    • (1996) Molecular Biology and Evolution , vol.13 , pp. 1297-1305
    • Keeling, P.J.1    Doolittle, W.F.2
  • 27
    • 0031038402 scopus 로고    scopus 로고
    • Evidence that eukaryotic triosephosophate isomerase is of alpha-proteobacterial origin
    • _. 1997. Evidence that eukaryotic triosephosophate isomerase is of alpha-proteobacterial origin. Proceedings of the National Academy of Sciences of the USA 94:1270-1275.
    • (1997) Proceedings of the National Academy of Sciences of the USA , vol.94 , pp. 1270-1275
  • 28
    • 0030315308 scopus 로고    scopus 로고
    • General inconsistency conditions for parsimony: Effects of branch lengths and increasing numbers of taxa
    • Kim, J. 1996. General inconsistency conditions for parsimony: effects of branch lengths and increasing numbers of taxa. Systematic Biology 45:363-373.
    • (1996) Systematic Biology , vol.45 , pp. 363-373
    • Kim, J.1
  • 29
    • 0030868589 scopus 로고    scopus 로고
    • Comparison of archaeal and bacterial genomes: Computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea
    • Koonin, E. V., A. R. Mushegian, M. Y. Galperin, and D. R. Walker. 1997. Comparison of archaeal and bacterial genomes: computer analysis of protein sequences predicts novel functions and suggests a chimeric origin for the archaea. Molecular Microbiology 25:619-637.
    • (1997) Molecular Microbiology , vol.25 , pp. 619-637
    • Koonin, E.V.1    Mushegian, A.R.2    Galperin, M.Y.3    Walker, D.R.4
  • 31
    • 0031504952 scopus 로고    scopus 로고
    • Gene trees in species trees
    • Maddison, W. P. 1997. Gene trees in species trees. Systematic Biology 46:523-536.
    • (1997) Systematic Biology , vol.46 , pp. 523-536
    • Maddison, W.P.1
  • 35
    • 0030035039 scopus 로고    scopus 로고
    • Archaeal-eubacterial mergers in the origin of Eukarya: Phylogenetic classification of life
    • _. 1996. Archaeal-eubacterial mergers in the origin of Eukarya: phylogenetic classification of life. Proceedings of the National Academy of Sciences of the USA 93:1071-1076.
    • (1996) Proceedings of the National Academy of Sciences of the USA , vol.93 , pp. 1071-1076
  • 38
    • 0030732297 scopus 로고    scopus 로고
    • A graphical method for detecting recombination in phylogenetic data sets
    • McGuire, G., F. Wright, and M. J. Prentice. 1997. A graphical method for detecting recombination in phylogenetic data sets. Molecular Biology and Evolution 14: 1125-1131.
    • (1997) Molecular Biology and Evolution , vol.14 , pp. 1125-1131
    • McGuire, G.1    Wright, F.2    Prentice, M.J.3
  • 40
    • 0032479390 scopus 로고    scopus 로고
    • Eubacterial origin of nuclear genes for chloroplast and cytosolic glucose-6-phosphate isomerase from spinach: Sampling eubacterial gene diversity in eukaryotic chromosomes through symbiosis
    • Nowitzki, U., A. Flechner, J. Kellermann, M. Hasegawa, C. Schnarrenberger, and W. Martin. 1998. Eubacterial origin of nuclear genes for chloroplast and cytosolic glucose-6-phosphate isomerase from spinach: sampling eubacterial gene diversity in eukaryotic chromosomes through symbiosis. Gene 214:205-213.
    • (1998) Gene , vol.214 , pp. 205-213
    • Nowitzki, U.1    Flechner, A.2    Kellermann, J.3    Hasegawa, M.4    Schnarrenberger, C.5    Martin, W.6
  • 41
    • 0344818374 scopus 로고    scopus 로고
    • Horizontal gene transfer and fusing lines of descent: The archaebacteria - a chimera?
    • M. Syvanen and C. I. Kado, eds. Chapman & Hall, London
    • Olendzenski, L., E. Hilario, and J. P. Gogarten. 1998. Horizontal gene transfer and fusing lines of descent: the archaebacteria - a chimera? Pages 349-362 in M. Syvanen and C. I. Kado, eds. Horizontal gene transfer. Chapman & Hall, London.
    • (1998) Horizontal Gene Transfer , pp. 349-362
    • Olendzenski, L.1    Hilario, E.2    Gogarten, J.P.3
  • 42
    • 0032744297 scopus 로고    scopus 로고
    • The diversity of eukaryotes
    • Patterson, D. J. 1999. The diversity of eukaryotes. American Naturalist 154(suppl.):S96-S124.
    • (1999) American Naturalist , vol.154 , Issue.SUPPL.
    • Patterson, D.J.1
  • 43
    • 0001874775 scopus 로고
    • Eukaryote origins and protistan diversity
    • H. Hartman and K. Matsuno, eds. World Scientific, River Edge, N.J.
    • Patterson, D. J., and M. L. Sogin. 1993. Eukaryote origins and protistan diversity. Pages 13-46 in H. Hartman and K. Matsuno, eds. The origin and evolution of the cell. World Scientific, River Edge, N.J.
    • (1993) The Origin and Evolution of the Cell , pp. 13-46
    • Patterson, D.J.1    Sogin, M.L.2
  • 44
    • 0031904633 scopus 로고    scopus 로고
    • The effect of taxonomic sampling on accuracy of phylogeny estimation: Test case of a known phylogeny
    • Poe, S. 1998. The effect of taxonomic sampling on accuracy of phylogeny estimation: test case of a known phylogeny. Molecular Biology and Evolution 15:1086-1090.
    • (1998) Molecular Biology and Evolution , vol.15 , pp. 1086-1090
    • Poe, S.1
  • 45
    • 0031587824 scopus 로고    scopus 로고
    • Archaeal histones, nucleosomes, and transcription initiation
    • Reeve, J. N., K. Sandman, and C. J. Daniels. 1997. Archaeal histones, nucleosomes, and transcription initiation. Cell 89:999-1002.
    • (1997) Cell , vol.89 , pp. 999-1002
    • Reeve, J.N.1    Sandman, K.2    Daniels, C.J.3
  • 48
    • 0001584709 scopus 로고
    • Biochemistry of the dinoflagellate nucleus
    • F. J. R. Taylor, ed. Blackwell Scientific, Oxford
    • Rizzo, P. J. 1987. Biochemistry of the dinoflagellate nucleus. Pages 143-173 in F. J. R. Taylor, ed. Botanical monographs: the biology of dinoflagellates 21. Blackwell Scientific, Oxford.
    • (1987) Botanical Monographs: The Biology of Dinoflagellates , vol.21 , pp. 143-173
    • Rizzo, P.J.1
  • 49
    • 0032702602 scopus 로고    scopus 로고
    • Reconstructing early events in eukaryotic evolution
    • Roger, A. J. 1999. Reconstructing early events in eukaryotic evolution. American Naturalist 154(suppl.): S146-S163.
    • (1999) American Naturalist , vol.154 , Issue.SUPPL.
    • Roger, A.J.1
  • 50
    • 0030267461 scopus 로고    scopus 로고
    • A chimeric origin for eukaryotes re-examined
    • Roger, A. J., and J. R. Brown. 1996. A chimeric origin for eukaryotes re-examined. Trends in Biochemical Sciences 21:370-372.
    • (1996) Trends in Biochemical Sciences , vol.21 , pp. 370-372
    • Roger, A.J.1    Brown, J.R.2
  • 51
    • 0014070709 scopus 로고
    • On the origin of mitosing cells
    • Sagan, L. 1967. On the origin of mitosing cells. Journal of Theoretical Biology 14:225-274.
    • (1967) Journal of Theoretical Biology , vol.14 , pp. 225-274
    • Sagan, L.1
  • 52
    • 0016832016 scopus 로고
    • Histone-like protein in the prokaryote Thermoplasma acidophilum
    • Searcy, D. G. 1975. Histone-like protein in the prokaryote Thermoplasma acidophilum. Biochimica et Biophysica Acta 395:535-547.
    • (1975) Biochimica et Biophysica Acta , vol.395 , pp. 535-547
    • Searcy, D.G.1
  • 55
    • 0000364659 scopus 로고
    • The main outlines of bacterial classification
    • Stanier, R. Y., and C. B. van Niel. 1941. The main outlines of bacterial classification. Journal of Bacteriology 42: 437-466.
    • (1941) Journal of Bacteriology , vol.42 , pp. 437-466
    • Stanier, R.Y.1    Van Niel, C.B.2
  • 56
    • 0002214011 scopus 로고
    • The concept of a bacterium
    • _. 1962. The concept of a bacterium. Archives in Microbiology 42:17-35.
    • (1962) Archives in Microbiology , vol.42 , pp. 17-35
  • 58
    • 0023081703 scopus 로고
    • An overview of the status of evolutionary cell symbiosis theories
    • Taylor, F. J. R. 1987. An overview of the status of evolutionary cell symbiosis theories. Annals of the New York Academy of Sciences 503:1-16.
    • (1987) Annals of the New York Academy of Sciences , vol.503 , pp. 1-16
    • Taylor, F.J.R.1
  • 59
    • 0031892518 scopus 로고    scopus 로고
    • Phylogenetic profiles: A graphical method for detecting genetic recombinations in homologous sequences
    • Weiller, G. F. 1998. Phylogenetic profiles: a graphical method for detecting genetic recombinations in homologous sequences. Molecular Biology and Evolution 15:326-335.
    • (1998) Molecular Biology and Evolution , vol.15 , pp. 326-335
    • Weiller, G.F.1
  • 60
    • 0001867808 scopus 로고
    • Extinction, sampling, and molecular phylogenetics
    • M. J. Novacek and Q. D. Wheeler, eds. Columbia University Press, New York
    • Wheeler, W. 1992. Extinction, sampling, and molecular phylogenetics. Pages 205-215 in M. J. Novacek and Q. D. Wheeler, eds. Extinction and phylogeny. Columbia University Press, New York.
    • (1992) Extinction and Phylogeny , pp. 205-215
    • Wheeler, W.1


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