메뉴 건너뛰기




Volumn 249, Issue 2, 1998, Pages 379-392

In vitro characterization of late steps of RNA recombination in turnip crinkle virus: I. Role of the Motif-Hairpin structure

Author keywords

Plant virus; Recombination; Replication; Satellite RNA; Template switching

Indexed keywords

RECOMBINANT RNA; SATELLITE RNA; VIRUS RNA;

EID: 0032582009     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.1998.9341     Document Type: Article
Times cited : (33)

References (39)
  • 1
    • 0025214653 scopus 로고
    • Regeneration of a functional RNA virus genome by recombination between deletion mutants and requirement for cowpea chlorotic mottle virus 3a and coat genes for systemic infection
    • Allison R. F., Thompson G., Ahlquist P. Regeneration of a functional RNA virus genome by recombination between deletion mutants and requirement for cowpea chlorotic mottle virus 3a and coat genes for systemic infection. Proc. Natl. Acad. Sci. USA. 87:1990;1820-1824.
    • (1990) Proc. Natl. Acad. Sci. USA , vol.87 , pp. 1820-1824
    • Allison, R.F.1    Thompson, G.2    Ahlquist, P.3
  • 2
    • 0031469193 scopus 로고    scopus 로고
    • Nodavirus RNA recombination
    • Ball L. A. Nodavirus RNA recombination. Semin. Virol. 8:1997;95-100.
    • (1997) Semin. Virol , vol.8 , pp. 95-100
    • Ball, L.A.1
  • 3
    • 0031442277 scopus 로고    scopus 로고
    • Subgenomic RNAs: The possible building blocks for modular recombination ofClosteroviridae
    • Bar-Joseph M., Yang G., Gafny R., Mawassi M. Subgenomic RNAs: The possible building blocks for modular recombination ofClosteroviridae. Semin. Virol. 8:1997;113-119.
    • (1997) Semin. Virol , vol.8 , pp. 113-119
    • Bar-Joseph, M.1    Yang, G.2    Gafny, R.3    Mawassi, M.4
  • 4
    • 0025348445 scopus 로고
    • Deletion of repeated sequences from tobacco mosaic virus mutants with two coat protein genes
    • Beck D. L., Dawson W. O. Deletion of repeated sequences from tobacco mosaic virus mutants with two coat protein genes. Virology. 177:1990;462-469.
    • (1990) Virology , vol.177 , pp. 462-469
    • Beck, D.L.1    Dawson, W.O.2
  • 5
    • 0030332528 scopus 로고    scopus 로고
    • Comparison of the replication of positive-stranded RNA viruses of plants and animals
    • Buck K. W. Comparison of the replication of positive-stranded RNA viruses of plants and animals. Adv. Virus Res. 47:1996;159-251.
    • (1996) Adv. Virus Res. , vol.47 , pp. 159-251
    • Buck, K.W.1
  • 6
    • 0025302678 scopus 로고
    • Recombination between satellite RNAs of turnip crinkle virus
    • Cascone P. J., Carpenter C. D., Li X. H., Simon A. E. Recombination between satellite RNAs of turnip crinkle virus. EMBO J. 9:1990;1709-1715.
    • (1990) EMBO J. , vol.9 , pp. 1709-1715
    • Cascone, P.J.1    Carpenter, C.D.2    Li, X.H.3    Simon, A.E.4
  • 7
    • 0027298575 scopus 로고
    • Sequences and structures required for recombination between virus-associated RNAs
    • Cascone P. J., Haydar T. F., Simon A. E. Sequences and structures required for recombination between virus-associated RNAs. Science. 260:1993;801-805.
    • (1993) Science , vol.260 , pp. 801-805
    • Cascone, P.J.1    Haydar, T.F.2    Simon, A.E.3
  • 8
    • 0030975364 scopus 로고    scopus 로고
    • Nonhomologous RNA recombination in a cell-free system: Evidence for a transesterification mechanism guided by the secondary structure
    • Chetverin A. B., Chetverina H. V., Demidenko A. A., Ugarov V. I. Nonhomologous RNA recombination in a cell-free system: Evidence for a transesterification mechanism guided by the secondary structure. Cell. 88:1997;503-513.
    • (1997) Cell , vol.88 , pp. 503-513
    • Chetverin, A.B.1    Chetverina, H.V.2    Demidenko, A.A.3    Ugarov, V.I.4
  • 9
    • 0001513230 scopus 로고
    • Evolution of positive-strand RNA viruses
    • Dolja V. V., Carrington J. C. Evolution of positive-strand RNA viruses. Semin. Virol. 3:1992;315-326.
    • (1992) Semin. Virol. , vol.3 , pp. 315-326
    • Dolja, V.V.1    Carrington, J.C.2
  • 10
    • 0029071516 scopus 로고
    • Protein-RNA recognition
    • Draper D. E. Protein-RNA recognition. Annu. Rev. Biochem. 64:1995;593-620.
    • (1995) Annu. Rev. Biochem. , vol.64 , pp. 593-620
    • Draper, D.E.1
  • 11
    • 0026735655 scopus 로고
    • RNA recombination in the genome of barley stripe mosaic virus
    • Edwards M. C., Petty I. T. D., Jackson A. O. RNA recombination in the genome of barley stripe mosaic virus. Virology. 189:1992;389-392.
    • (1992) Virology , vol.189 , pp. 389-392
    • Edwards, M.C.1    Petty, I.T.D.2    Jackson, A.O.3
  • 13
    • 0025909185 scopus 로고
    • A model for the generation of tobacco rattle virus (TRV) anomalous isolates: Pea early browning virus RNA2 acquires TRV sequences from both RNA-1 and RNA-2
    • Goulden M. G., Lomonossoff G. P., Wood K. R., Davies J. W. A model for the generation of tobacco rattle virus (TRV) anomalous isolates: Pea early browning virus RNA2 acquires TRV sequences from both RNA-1 and RNA-2. J. Gen. Virol. 72:1991;1751-1754.
    • (1991) J. Gen. Virol. , vol.72 , pp. 1751-1754
    • Goulden, M.G.1    Lomonossoff, G.P.2    Wood, K.R.3    Davies, J.W.4
  • 14
    • 0031468352 scopus 로고    scopus 로고
    • RNA promoters located on (-)-strands of a subviral RNA associated with turnip crinkle virus
    • Guan H., Song C., Simon A. E. RNA promoters located on (-)-strands of a subviral RNA associated with turnip crinkle virus. RNA. 3:1997;1401-1412.
    • (1997) RNA , vol.3 , pp. 1401-1412
    • Guan, H.1    Song, C.2    Simon, A.E.3
  • 15
    • 0029946792 scopus 로고    scopus 로고
    • Nonhomologous RNA-RNA recombination events at the 3′ nontranslated region of the Sindbis virus genome: Hot spots and utilization of nonviral sequences
    • Hajjou M., Hill K. R., Subramaniam S. V., Hu J. Y., Raju R. Nonhomologous RNA-RNA recombination events at the 3′ nontranslated region of the Sindbis virus genome: Hot spots and utilization of nonviral sequences. J. Virol. 70:1996;5153-5164.
    • (1996) J. Virol , vol.70 , pp. 5153-5164
    • Hajjou, M.1    Hill, K.R.2    Subramaniam, S.V.3    Hu, J.Y.4    Raju, R.5
  • 16
    • 0024713775 scopus 로고
    • Alfalfa mosaic virus temperature-sensitive mutants V. The nucleotide sequence of TBTS 7 RNA 3 shows limited nucleotide changes and evidence for heterologous recombination
    • Huisman M. J., Cornelissen B. J. C., Groenendijk C. F. M., Bol J. F., Van Vloten-Doting L. Alfalfa mosaic virus temperature-sensitive mutants V. The nucleotide sequence of TBTS 7 RNA 3 shows limited nucleotide changes and evidence for heterologous recombination. Virology. 171:1989;409-416.
    • (1989) Virology , vol.171 , pp. 409-416
    • Huisman, M.J.1    Cornelissen, B.J.C.2    Groenendijk, C.F.M.3    Bol, J.F.4    Van Vloten-Doting, L.5
  • 17
    • 0025801332 scopus 로고
    • The polymerase in its labyrinth: Mechanisms and implications of RNA recombination
    • Jarvis T. C., Kirkegaard K. The polymerase in its labyrinth: Mechanisms and implications of RNA recombination. Trends Genet. 7:1991;186-191.
    • (1991) Trends Genet. , vol.7 , pp. 186-191
    • Jarvis, T.C.1    Kirkegaard, K.2
  • 18
    • 85053959765 scopus 로고
    • Genetic recombination in positive strand RNA viruses
    • Boca Raton: CRC Press. p. 149-185
    • King A. M. Q. Genetic recombination in positive strand RNA viruses. RNA Genetics. 1988;CRC Press, Boca Raton. p. 149-185.
    • (1988) RNA Genetics
    • King, A.M.Q.1
  • 19
    • 0026602984 scopus 로고
    • RNA recombination in animal and plant viruses
    • Lai M. C. M. RNA recombination in animal and plant viruses. Microbiol. Rev. 56:1992;61-79.
    • (1992) Microbiol. Rev. , vol.56 , pp. 61-79
    • Lai, M.C.M.1
  • 20
    • 0026660332 scopus 로고
    • Genetic recombination in brome mosaic virus: Effect of sequence and replication of RNA on accumulation of recombinants
    • Nagy P. D., Bujarski J. J. Genetic recombination in brome mosaic virus: Effect of sequence and replication of RNA on accumulation of recombinants. J. Virol. 66:1992;6824-6828.
    • (1992) J. Virol , vol.66 , pp. 6824-6828
    • Nagy, P.D.1    Bujarski, J.J.2
  • 21
    • 0027313424 scopus 로고
    • Targeting the site of RNA-RNA recombination in brome mosaic virus with antisense sequences
    • Nagy P. D., Bujarski J. J. Targeting the site of RNA-RNA recombination in brome mosaic virus with antisense sequences. Proc. Natl. Acad. Sci. USA. 90:1993;6390-6394.
    • (1993) Proc. Natl. Acad. Sci. USA , vol.90 , pp. 6390-6394
    • Nagy, P.D.1    Bujarski, J.J.2
  • 22
    • 0028936186 scopus 로고
    • Efficient system of homologous RNA recombination in brome mosaic virus: Sequence and structure requirements and accuracy of crossovers
    • Nagy P. D., Bujarski J. J. Efficient system of homologous RNA recombination in brome mosaic virus: Sequence and structure requirements and accuracy of crossovers. J. Virol. 69:1995;131-140.
    • (1995) J. Virol. , vol.69 , pp. 131-140
    • Nagy, P.D.1    Bujarski, J.J.2
  • 23
    • 0029656131 scopus 로고    scopus 로고
    • Homologous RNA recombination in brome mosaic virus: AU-rich sequences decrease the accuracy of crossovers
    • Nagy P. D., Bujarski J. J. Homologous RNA recombination in brome mosaic virus: AU-rich sequences decrease the accuracy of crossovers. J. Virol. 70:1996;415-426.
    • (1996) J. Virol. , vol.70 , pp. 415-426
    • Nagy, P.D.1    Bujarski, J.J.2
  • 24
    • 0030900659 scopus 로고    scopus 로고
    • Engineering of homologous recombination hotspots with AU-rich sequences in brome mosaic virus: AU-rich sequences decrease the accuracy of crossovers
    • Nagy P. D., Bujarski J. J. Engineering of homologous recombination hotspots with AU-rich sequences in brome mosaic virus: AU-rich sequences decrease the accuracy of crossovers. J. Virol. 71:1997;3799-3810.
    • (1997) J. Virol. , vol.71 , pp. 3799-3810
    • Nagy, P.D.1    Bujarski, J.J.2
  • 26
    • 0030759896 scopus 로고    scopus 로고
    • New insights into the mechanisms of RNA recombination
    • Nagy P. D., Simon A. E. New insights into the mechanisms of RNA recombination. Virology. 235:1997;1-9.
    • (1997) Virology , vol.235 , pp. 1-9
    • Nagy, P.D.1    Simon, A.E.2
  • 27
    • 0032522539 scopus 로고    scopus 로고
    • Dissecting RNA recombinationin vitro
    • Nagy P. D., Zhang C., Simon A. E. Dissecting RNA recombinationin vitro. EMBO J. 17:1998;2392-2403.
    • (1998) EMBO J. , vol.17 , pp. 2392-2403
    • Nagy, P.D.1    Zhang, C.2    Simon, A.E.3
  • 28
    • 0027472267 scopus 로고
    • Recombination and polymerase error facilitate restoration of infectivity in brome mosaic virus
    • Rao A. L. N., Hall T. C. Recombination and polymerase error facilitate restoration of infectivity in brome mosaic virus. J. Virol. 67:1993;969-979.
    • (1993) J. Virol. , vol.67 , pp. 969-979
    • Rao, A.L.N.1    Hall, T.C.2
  • 29
    • 0028121182 scopus 로고
    • RNA-RNA recombination and evolution in virus infected plants
    • Simon A. E., Bujarski J. J. RNA-RNA recombination and evolution in virus infected plants. Annu. Rev. Phythopathol. 32:1994;337-362.
    • (1994) Annu. Rev. Phythopathol. , vol.32 , pp. 337-362
    • Simon, A.E.1    Bujarski, J.J.2
  • 30
    • 0000287281 scopus 로고
    • The virulent satellite RNA of turnip crinkle virus has a major domain homologous to the 3′ end of the helper virus genome
    • Simon A. E., Howell S. H. The virulent satellite RNA of turnip crinkle virus has a major domain homologous to the 3′ end of the helper virus genome. EMBO J. 5:1986;3423-3428.
    • (1986) EMBO J. , vol.5 , pp. 3423-3428
    • Simon, A.E.1    Howell, S.H.2
  • 31
    • 0030425555 scopus 로고    scopus 로고
    • RNA recombination in turnip crinkle virus: Its role in formation of chimeric RNAs, multimers, and in 3′-end repair
    • Simon A. E., Nagy P. D. RNA recombination in turnip crinkle virus: Its role in formation of chimeric RNAs, multimers, and in 3′-end repair. Semin. Virol. 7:1996;373-379.
    • (1996) Semin. Virol. , vol.7 , pp. 373-379
    • Simon, A.E.1    Nagy, P.D.2
  • 32
    • 0028584238 scopus 로고
    • RNA-dependent RNA polymerase from plants infected with turnip crinkle virus can transcribe (+) and (-)-strands of virus-associated RNAs
    • Song C., Simon A. E. RNA-dependent RNA polymerase from plants infected with turnip crinkle virus can transcribe (+) and (-)-strands of virus-associated RNAs. Proc. Natl. Acad. Sci. USA. 91:1994;8792-8796.
    • (1994) Proc. Natl. Acad. Sci. USA , vol.91 , pp. 8792-8796
    • Song, C.1    Simon, A.E.2
  • 33
    • 0028786430 scopus 로고
    • Requirement of a 3′-terminal stem-loop inin vitro
    • Song C., Simon A. E. Requirement of a 3′-terminal stem-loop inin vitro. J. Mol. Biol. 254:1995;6-14.
    • (1995) J. Mol. Biol. , vol.254 , pp. 6-14
    • Song, C.1    Simon, A.E.2
  • 35
    • 0031585575 scopus 로고    scopus 로고
    • Analysisin vivo
    • Stupina V., Simon A. E. Analysisin vivo. Virology. 238:1997;470-477.
    • (1997) Virology , vol.238 , pp. 470-477
    • Stupina, V.1    Simon, A.E.2
  • 36
    • 0030957051 scopus 로고    scopus 로고
    • Analysis of the two subgenomic RNA promoters for turnip crinkle virusin vivoin vitro
    • Wang J., Simon A. E. Analysis of the two subgenomic RNA promoters for turnip crinkle virusin vivoin vitro. Virology. 232:1997;174-186.
    • (1997) Virology , vol.232 , pp. 174-186
    • Wang, J.1    Simon, A.E.2
  • 37
    • 0025861666 scopus 로고
    • Recombination between Sindbis virus RNAs
    • Weiss B. G., Schlesinger S. Recombination between Sindbis virus RNAs. J. Virol. 65:1991;4017-4025.
    • (1991) J. Virol. , vol.65 , pp. 4017-4025
    • Weiss, B.G.1    Schlesinger, S.2
  • 38
    • 0029447820 scopus 로고
    • RNA determinants of junction site selection in RNA virus recombinants and defective interfering RNAs
    • White K. A., Morris T. J. RNA determinants of junction site selection in RNA virus recombinants and defective interfering RNAs. RNA. 1:1995;1029-1040.
    • (1995) RNA , vol.1 , pp. 1029-1040
    • White, K.A.1    Morris, T.J.2
  • 39
    • 85053971721 scopus 로고
    • Evolution of RNA viruses
    • J.J. Holland, E. Domingo, & P. Ahlquist. Boca Raton: CRC Press
    • Zimmern D. Evolution of RNA viruses. Holland J. J., Domingo E., Ahlquist P. RNA Genetics. 1988;211-240 CRC Press, Boca Raton.
    • (1988) RNA Genetics , pp. 211-240
    • Zimmern, D.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.