A structural tree for proteins containing S-like β-sheets

FEBS Letters

Volumn 437, Issue 3, 1998, Pages 246-250

  Efimov, Alexander V ^a  

^a INSTITUTE OF PROTEIN RESEARCH   (Russian Federation)

Author keywords

Protein classification; Protein structure modelling; Stepwise folding; Structural motif; Structural similarity

Indexed keywords

PROTEIN;

CLASSIFICATION; MODEL; PRIORITY JOURNAL; PROTEIN FOLDING; PROTEIN STRUCTURE; REVIEW;

EID: 0032561255     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0014-5793(98)01244-7     Document Type: Article

References (37)

1. Efimov A.V. Proteins. 28:1997;241-260.
2. Efimov A.V. FEBS Lett. 407:1997;37-41.
3. Efimov A.V. FEBS Lett. 334:1993;253-256.
4. Efimov A.V. Structure. 2:1994;999-1002.
5. Iwasaki W., Nagata K., Hatanaka H., Inui T., Kimura T., Muramatsu T., Yoshida K., Tasumi M., Inagaki F. EMBO J. 16:1997;6936-6946.
6. Ball L.J., Murzina N.V., Broadhurst R.W., Raine A.R.C., Archer S.J., Stott F.J., Murzin A.G., Singh P.B., Domaille P.J., Laue E.D. EMBO J. 16:1997;2473-2481.
7. Zhu W., Zeng Q., Colangelo C.M., Lewis L.M., Summers M.F., Scott R.A. Nat. Struct. Biol. 3:1996;122-124.
8. Efimov A.V. Mol. Biol. (Moscow). 16:1982;799-806.
9. Chothia C., Levitt M., Richardson D. Proc. Natl. Acad. Sci. USA. 74:1977;4130-4134.
10. Efimov A.V. Dokl. Akad. Nauk SSSR. 235:1977;699-702.
11. Efimov A.V. J. Mol. Biol. 245:1995;402-415.
12. Lim V.I., Mazanov A.L., Efimov A.V. Mol. Biol. (Moscow). 12:1978;206-213.
13. Richardson J.S. Nature. 268:1977;495-500.
14. Rao S.T., Rossmann M.G. J. Mol. Biol. 76:1973;241-256.
15. Sternberg M.J.E., Thornton J.M. J. Mol. Biol. 105:1976;367-382.
16. Chothia C., Janin J. Biochemistry. 21:1982;3955-3965.
17. Subramanya H.S., Doherty A.J., Ashford S.R., Wigley D.B. Cell. 85:1996;607-615.
18. Osinaga E., Tello D., Batthyany C., Bianchet M., Tavares G., Durán R., Cervenansky C., Camoin L., Roseto A., Alzari P.M. FEBS Lett. 412:1997;190-196.
19. Ricaud P.M., Howard M.J., Roberts E.L., Broadhurst R.W., Perham R.N. J. Mol. Biol. 264:1996;179-190.
20. Golden B.L., Ramakrishnan V., White S.W. EMBO J. 12:1993;4901-4908.
21. Hoess A., Watson S., Siber G.R., Liddington R. EMBO J. 12:1993;3351-3356.
22. Kharrat A., Macias M.J., Gibson T.J., Nilges M., Pastore A. EMBO J. 14:1995;3572-3584.
23. Birse D.E.A., Kapp U., Strub K., Cusack S., Åberg A. EMBO J. 16:1997;3757-3766.
24. Parge H.E., Forest K.T., Hickey M.J., Christensen D.A., Getzoff E.D., Tainer J.A. Nature. 378:1995;32-38.
25. Gorman M.A., Morera S., Rothwell D.G., de La Fortelle E., Mol C.D., Tainer J.A., Hickson I.D., Freemont P.S. EMBO J. 16:1997;6548-6558.
26. Wilkens S., Dahlquist F.W., McIntosh L.P., Donaldson L.W., Capaldi R.A. Nat. Struct. Biol. 2:1995;961-967.
27. Eijkelenboom A.P.A.M., Lutzke R.A.P., Boelens R., Plasterk R.H.A., Kaptein R., Hård K. Nat. Struct. Biol. 2:1995;807-810.
28. Polyakov K.M., Vagin A.A., Tishchenko G.N., Bezborodova S.I., Vainshtein B.K. Dokl. Akad. Nauk SSSR. 273:1983;1383-1386.
29. Guo F., Gopaul D.N., Van Duyne G.D. Nature. 389:1997;40-46.
30. Subramanya H.S., Arciszewska L.K., Baker R.A., Bird L.E., Sherratt D.J., Wigley D.B. EMBO J. 16:1997;5178-5187.
31. Murzin A.G. EMBO J. 12:1993;861-867.
32. Cusack S., Yaremchuk A., Tukalo M. EMBO J. 15:1996;6321-6334.
33. Rufino C.D., Blundell T.L. J. Comput. Aided Mol. Design. 8:1994;5-27.
34. Murzin A.G., Brenner S.E., Hubbard T., Chothia C. J. Mol. Biol. 247:1995;536-540.
35. Holm L., Sander C. Science. 273:1996;595-602.
36. Orengo C.A., Michie A.D., Jones S., Jones D.T., Swindells M.B., Thornton J.M. Structure. 5:1997;1093-1108.
37. Viguera A.R., Serrano L., Wilmanns M. Nat. Struct. Biol. 3:1996;874-880.