Thiamin metabolism and thiamin diphosphate-dependent enzymes in the yeast Saccharomyces cerevisiae: genetic regulation

Biochimica et Biophysica Acta - Protein Structure and Molecular Enzymology

Volumn 1385, Issue 2, 1998, Pages 201-219

  Hohmann, Stefan ^a,b   Meacock, Peter A ^c  

^a UNIVERSITY OF GOTHENBURG   (Sweden)

^b UNIVERSITY OF LEUVEN   (Belgium)

^c UNIVERSITY OF LEICESTER   (United Kingdom)

Author keywords

Gene expression; Genome sequence; Metabolic regulation; Thiamin diphosphate dependent enzyme; Thiamin metabolism; Yeast genetics

Indexed keywords

ACETOLACTATE SYNTHASE; COCARBOXYLASE; OXOGLUTARATE DEHYDROGENASE; PYRUVATE DECARBOXYLASE; PYRUVATE DEHYDROGENASE; THIAMINE; TRANSKETOLASE;

GENE EXPRESSION; GENE SEQUENCE; GENETIC REGULATION; NONHUMAN; PRIORITY JOURNAL; REVIEW; SACCHAROMYCES CEREVISIAE; VITAMIN METABOLISM;

ACETOLACTATE SYNTHASE; GENE EXPRESSION REGULATION, ENZYMOLOGIC; KETOGLUTARATE DEHYDROGENASE COMPLEX; PYRUVATE DECARBOXYLASE; PYRUVATE DEHYDROGENASE COMPLEX; SACCHAROMYCES CEREVISIAE; THIAMINE; THIAMINE PYROPHOSPHATE; TRANSKETOLASE;

SACCHAROMYCES CEREVISIAE;

EID: 0032537591     PISSN: 01674838     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0167-4838(98)00069-7     Document Type: Review

References (117)

1. Mewes H.W., Albermann K., Bahr M., Frishman D., Gleissner A., Hani J., Heumann K., Kleine K., Maierl A., Oliver S.G., Pfeiffer F., Zollner A. Nature. 387:(6632 Suppl.):1997;7-65.
2. Begley T.P. Nat. Prod. Rep. 13:1996;177-185.
3. Estramareix B., David S. New J. Chem. 20:1996;607-629.
4. Beadle Y.W., Tatum N.L. Am. J. Bot. 32:1941;678-686.
5. Langridge J. BioEssays. 16:1994;775-778.
6. Brown G. Methods Enzymol. 189:1970;203-207.
7. Kawasaki Y. J. Bacteriol. 175:1993;5153-5158.
8. Nosaka K., Nishimura H., Kawasaki Y., Tsujihara T., Iwashima A. J. Biol. Chem. 269:1994;30510-30516.
9. Weil-Malherbe M. Biochem. J. 33:1939;1997-2007.
10. Camiener G.W., Brown G.M. J. Biol. Chem. 235:1960;2404-2410.
11. Nosaka K., Kaneko Y., Nishimura H., Iwashima A. FEMS Microbiol. Lett. 60:1989;55-59.
12. Nosaka K., Kaneko Y., Nishimura H., Iwashima A. J. Biol. Chem. 268:1993;17440-17447.
13. Nishimura H., Kawaski Y., Kaneko Y., Nosaka K., Iwashima A. J. Bacteriol. 173:1991;2716-2719.
14. White R.L., Spenser I.D. Biochem. J. 179:1979;315-325.
15. White R.L., Spenser I.D. J. Am. Chem. Soc. 104:1982;4934-4943.
16. R.L. White, I.D. Spenser, in: F.C. Neidhardt (Ed.), Escherichia coli and Salmonella; Cellular and Molecular Biology, Vol. 1, 2nd edn., ASM Press, Washington, DC, 1996, pp. 680-686.
17. Tazuya K., Yamada K., Nakamura K., Kumaoka H. Biochim. Biophys. Acta. 924:1987;210-215.
18. Praekelt U.M., Meacock P.A. Yeast. 8:1992;699-710.
19. Praekelt U.M., Byrne K.L., Meacock P.A. Yeast. 10:1994;481-490.
20. Vander Horn P.B., Bachstrom A.D., Stewart V., Begley T.P. J. Bacteriol. 175:1993;982-992.
21. Ryals J., Hsu R.-Y., Lipsett M.N., Bremer H. J. Bacteriol. 151:1982;899-904.
22. Zurlinden A., Schweingruber M.E. Gene. 117:1992;141-143.
23. Manetti A.O., Rosetto M., Maundrell K.G. Yeast. 10:1994;1075-1082.
24. Choi G.H., Marek E.T., Schardia C.L., Richey M.G., Chang S., Smith D.A. J. Bacteriol. 172:1990;4522-4528.
25. Belanger F.C., Leustek T., Chu B., Kriz A.L. Plant Mol. Biol. 29:1995;809-821.
26. Ribero A., Praekelt U.M., Akkermans A.D.L., Meacock P.A., van Kammem A., Bisseling T., Pawlowski K. Plant J. 10:1996;361-368.
27. Machado C.R., Costa de Oliveira R.L., Praekelt U.M., Meacock P.A., Menck C.F.M. Plant Mol. Biol. 31:1996;585-594.
28. Machado C.R., Praekelt U.M., Costa de Oliveira R.L., Barbosa A.C.C., Byrne K.L., Meacock P.A., Menck C.F.M. J. Mol. Biol. 273:1997;114-121.
29. Tazuya K., Yamada K., Kumaoka H. Biochim. Biophys. Acta. 990:1989;73-79.
30. Tazuya K., Yamada K., Kumaoka H. Biochem. Mol. Biol. Int. 30:1993;893-899.
31. Tazuya K., Azumi C., Yamada K., Kumaoka H. Biochem. Mol. Biol. Int. 33:1993;769-774.
32. Tazuya K.A.C., Yamada K., Kumaoka H. Biochem. Mol. Biol. Int. 36:1995;883-888.
33. Kamihara T., Nakamura I. Adv. Biochem. Eng. Biotechnol. 29:1982;35-82.
34. Maundrell K. J. Biol. Chem. 265:1990;10857-10864.
35. R.J. Hather, Ph.D. Thesis, University of Leicester, Leicester, 1996.
36. Louis E.J., Naumova E.S., Lee A., Naumov G., Haber J.E. Genetics. 136:1994;789-802.
37. Louis E.J. Yeast. 27:1995;53-83.
38. H. Soumalainen, E. Oura, in: A.H. Rose, S.J. Harrison (Eds.), The Yeasts, Vol. 2, Academic Press, New York, 1971, pp. 3-74.
39. Iwashima A., Nishino H., Nose Y. Biochim. Biophys. Acta. 330:1973;220-234.
40. Ruml T., Silhankova L., Rauch P. Folia Microbiol. 33:1988;372-376.
41. Iwashima A., Nose Y. J. Bacteriol. 128:1976;855-857.
42. Iwashima A., Kawasaki Y., Kimura Y. Biochim. Biophys. Acta. 1022:1990;211-214.
43. Iwashima A., Wakabayashi Y., Nose Y. Biochim. Biophys. Acta. 413:1975;243-247.
44. Iwashima A., Nishimura H. Biochim. Biophys. Acta. 577:1979;217-220.
45. Iwashima A., Nishimura H., Nose Y. Biochim. Biophys. Acta. 577:1979;460-468.
46. Schweingruber M.E., Fluri R., Maundrell K., Schweingruber A.-M., Dumermuth E. J. Biol. Chem. 261:1986;15877-15882.
47. Enzo F., Nosaka K., Ogata M., Iwashima A., Nishimura H. J. Biol. Chem. 272:1997;16165-16170.
48. Singleton C.K. Gene. 199:1997;111-121.
49. Marger M.D., Saier Jr M.H. Trends Biochem. Sci. 18:1993;13-20.
50. Nelissen B., Mordant P., Jonniaux J.-L., Wachter R.D., Goffeau A. FEBS Lett. 377:1995;232-236.
51. Ruml T., Silhankova L. Yeast. 12:1996;1279-1283.
52. Kawasaki Y., Nosaka K., Kaneko Y., Nishimura H., Iwashima A. J. Bacteriol. 172:1990;6145-6147.
53. Tommasino M., Maundrell K. Curr. Genet. 20:1991;63-66.
54. Nosaka K., Yamanishi K., Nishimura H., Iwashima A. FEBS Lett. 305:1992;244-248.
55. Nishimura H., Kawaski Y., Kaneko Y., Nosaka K., Iwashima A. FEBS Lett. 297:1992;155-158.
56. Nishimura H., Kawaski Y., Kaneko Y., Nosaka K., Iwashima A. J. Bacteriol. 174:1992;4701-4706.
57. Dickinson J.R., Lanterman M.M., Danner D.J., Pearson B.M., Sanz P., Harrison S.J., Hewlins M.J.E. J. Biol. Chem. 272:1997;26871-26878.
58. Hohmann S. Mol. Gen. Genet. 241:1993;657-666.
59. Raghuram V., Lobo Z., Maitra P.K. J. Genet. 73:1994;17-32.
60. Kim J.-H., Powers S. Mol. Cell. Biol. 11:1991;3894-3904.
61. Tang C.S.L., Buenos A., Russell P. J. Biol. Chem. 269:1994;11921-11926.
62. Schweingruber A.-M., Fankhauser H., Dlugonski J., Steinmann-Loss C., Schweingruber M.E. Genetics. 130:1992;445-449.
63. Fankhauser H., Zurlinden A., Schweingruber A.-M., Edenharter E., Schweingruber M.E. J. Biol. Chem. 270:1995;28457-28462.
64. Schmitt H.D., Ciriacy M., Zimmermann F.K. Mol. Gen. Genet. 192:1983;247-252.
65. Schaaff I., Green J.B.A., Gozalbo D., Hohmann S. Curr. Genet. 15:1989;75-81.
66. Seeboth P.G., Bohnsack K., Hollenberg C.P. J. Bacteriol. 172:1990;678-685.
67. Hohmann S., Cederberg H. Eur. J. Biochem. 188:1990;615-621.
68. Hohmann S. J. Bacteriol. 173:1991;7963-7969.
69. Falco S.C., Dumas K.S., Livak K.J. Nucleic Acids Res. 13:1985;4011-4027.
70. Lung H.Y., Baetz A.L., Peck A.B. J. Bacteriol. 176:1994;2468-2472.
71. Sundström M., Lindqvist Y., Schneider G., Hellman U., Ronne H. J. Biol. Chem. 268:1993;24346-24352.
72. Schaaff-Gerstenschläger I., Mannhaupt G., Vetter I., Zimmermann F.K., Feldmann H. Eur. J. Biochem. 217:1993;487-492.
73. Steensma H.Y., Holterman L., Dekker I., van Sluis C.A., Wenzel T. Eur. J. Biochem. 191:1990;769-774.
74. Repetto B., Tzagoloff A. Mol. Cell. Biol. 9:1989;2695-2705.
75. Dickinson J.R., Dawes I.W. J. Gen. Microbiol. 138:1992;2029-2033.
76. C. Gancedo, R. Serrano, in: A.H. Rose, J.S. Harrison (Eds.), The Yeasts, Vol. 3, Academic Press, New York, 1989, pp. 205-259.
77. S. Hohmann, in: F.K. Zimmermann, K.-D. Entian (Eds.), Yeast Sugar Metabolism, Technomic, Lancaster, 1997, pp. 187-211.
78. S. Hohmann, I. Eberhardt, E. Muller, G.J.H. Pretorius, in: H. Bisswanger, A. Schellenberger (Eds.), Biochemistry and Physiology of Thiamin Diphosphate Enzymes, 1996, pp. 125-133.
79. Hohmann S. Curr. Genet. 20:1991;373-378.
80. Flikweert M.T., Vanderzanden L., Janssen W., Steensma H.Y., van Dijken J.P., Pronk J.T. Yeast. 12:1996;247-257.
81. Pronk J.T., Steensma H.Y., van Dijken J.P. Yeast. 12:1996;1607-1633.
82. I. Eberhardt, S. Hohmann, in: H. Bisswanger, A. Schellenberger (Eds.), Biochemistry and Physiology of Thiamin Diphosphate Enzymes, 1996, pp. 134-140.
83. Liesen T., Hollenberg C.P., Heinisch J.J. Mol. Microbiol. 21:1996;621-632.
84. Schmitt H.D., Zimmermann F.K. J. Bacteriol. 151:1982;1146-1152.
85. Kellermann E., Hollenberg C.P. Curr. Genet. 14:1988;337-344.
86. Butler G., McConnell D.J. Curr. Genet. 14:1988;405-412.
87. Butler G., Dawes I.W., McConnell D.J. Mol. Gen. Genet. 223:1990;449-456.
88. Hohmann S., Huse K., Valentin E., Mbonyi K., Thevelein J.M., Zimmermann F.K. J. Bacteriol. 174:1992;4183-4188.
89. Chambers A., Tsang J.S.H., Stanway C., Kingsman A.J., Kingsman S.M. Mol. Cell. Biol. 9:1989;5516-5524.
90. Chambers A., Packham E.A., Graham I.R. Curr. Genet. 29:1995;1-9.
91. Boiteux A., Hess B. FEBS Lett. 9:1970;293-296.
92. Thevelein J.M., Hohmann S. Trends Biochem. Sci. 20:1995;3-10.
93. Miran S.G., Lawson J.E., Reed L.J. Proc. Natl. Acad. Sci. USA. 90:1993;1252-1256.
94. Niu X.D., Browning K.S., Behal R.H., Reed L.J. Proc. Natl. Acad. Sci. USA. 85:1988;7546-7550.
95. Roy D.J., Dawes I.W. J. Gen. Microbiol. 133:1987;925-933.
96. Behal R.H., Browning K.S., Hall T.B., Reed L.J. Proc. Natl. Acad. Sci. USA. 86:1989;8732-8736.
97. H.Y. Steensma, in: F.K. Zimmermann, K.-D. Entian (Eds.), Yeast Sugar Metabolism, Technomic, Lancaster, 1997, pp. 339-357.
98. Wenzel T.J., van den Berg M.A., Visser W., van den Berg J.A., Steensma H.Y. Eur. J. Biochem. 209:1992;697-705.
99. Pronk J.T., Wenzel T.J., Luttik M.A.H., Klaassen C.C.M., Scheffers W.A., Steensma H.Y., van Dijken J.P. Microbiology. 140:1994;601-610.
100. Wenzel T.J., Luttik M.A., van den Berg J.A., Steensma H.Y. Eur. J. Biochem. 218:1993;405-411.
101. Wenzel T.J., Zuurmond A.M., Bergmans A., van den Berg J.A., Steensma H.Y. Yeast. 10:1994;297-308.
102. Wenzel T.J., Teunissen A.W., Steensma H.Y. Nucleic Acids Res. 23:1995;883-884.
103. Hinnebusch A.G. Prog. Nucleic Acid Res. Mol. Biol. 38:1990;195-240.
104. Repetto B., Tzagoloff A. Mol. Cell. Biol. 10:1990;4221-4232.
105. Repetto B., Tzagoloff A. Mol. Cell. Biol. 11:1991;3931-3939.
106. Schaaff-Gerstenschläger I., Zimmermann F.K. Curr. Genet. 24:1993;373-376.
107. Lindqvist Y., Schneider G. Curr. Opin. Struct. Biol. 3:1993;896-901.
108. Falco S.C., Dumas K.S. Genetics. 109:1985;21-35.
109. Maiti S.N., Zink M.W., Rank G.H. Can. J. Microbiol. 34:1988;680-685.
110. Gjermansen C., Nilsson-Tillgren T., Petersen J.G., Kielland-Brandt M.C., Sigsgaard P., Holmberg S. J. Basic Microbiol. 28:1988;175-183.
111. J.R.M. Hammond, in: R.A.H., H.J.S. (Eds.), The Yeasts, Vol. 5, Academic Press, London, 1993.
112. Hammond J.R.M. Yeast. 11:1995;1613-1627.
113. Cullin C., Baudin-Baillieu A., Guillemet E., Ozier-Kalogeropoulos O. Yeast. 12:1996;1511-1518.
114. Hawthorne D.C., Mortimer R.K. Genetics. 45:1960;1085.
115. Xiao W., Rank G.H. Genome. 30:1988;984-986.
116. Xiao W., Rank G.H. Genome. 33:1990;596-603.
117. Friden P., Schimmel P. Mol. Cell. Biol. 8:1988;2690-2697.