Crystal structure of an RNA octamer duplex r(CCCIUGGG)2 incorporating tandem I·U wobbles

Nucleic Acids Research

Volumn 26, Issue 24, 1998, Pages 5699-5706

  Pan, Baocheng ^a   Mitra, Shome Nath ^a   Sun, Liqiang ^a   Hart, David ^a   Sundaralingam, Muttaiya ^a  

^a OHIO STATE UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DOUBLE STRANDED RNA; PURINE; PYRIMIDINE;

ARTICLE; BASE MISPAIRING; CRYSTAL STRUCTURE; HYDROGEN BOND; PRIORITY JOURNAL; RNA STRUCTURE;

EID: 0032534718     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/26.24.5699     Document Type: Article

References (33)

1. Limbach, P.A., Crain, P.F. and McCloskey, J.A. (1994) Nucleic Acids Res., 22, 2183-2196.
2. Sprinzl, M., Steegborn, C., Hubel, F. and Steinberg, S. (1996) Nucleic Acids Res., 24, 68-72.
3. Bass, B.L. and Weintraub, H. (1988) Cell, 55, 1089-1098.
4. Wagner, R.W., Smith, J.E., Cooperman, B.S. and Nishikura, K. (1989) Proc. Natl Acad. Sci. USA, 86, 2647-2651.
5. Melcher, T., Mass, S., Higushi, M., Keller, W. and Seeburg, P.H. (1995) J. Biol. Chem., 270, 8566-8570.
6. Yang, J., Sklar, P., Axel, R. and Manlatis, T. (1995) Nature, 374, 77-81.
7. Rueter, S.M., Burns, C.M., Coode, S.A., Mookherjee, P. and Emerson, R.B. (1995) Science, 267, 1491-1494.
8. Melcher, T., Mass, S., Herb, A., Sprengel, R., Seeburg, P.H. and Higuchi, M. (1996) Nature, 379, 460-464.
9. Ecker, A., ter Meulen, V., Baczko, K. and Schneider-Schaulies, S. (1995) J. Neurovirol., 1, 92-100.
10. Horikami, S.M. and Moyer, S.A. (1995) Virus Res., 36, 87-96.
11. Polson, A.G., Bass, L. and Casey, L.C. (1996) Nature, 380, 454-456.
12. Sharmeen, L., Bass, B., Sonenberg, N., Weintraub, H. and Groudine, M. (1991) Proc. Natl Acad. Sci. USA, 88, 8096-8100.
13. Crick, F.H.C. (1966) J. Mol. Biol., 19, 548-555.
14. Pan, B., Mitra, S.N. and Sundaralingam, M. (1998) J. Mol. Biol., 283, 977-984.
15. Jang, S.B., Hung, L.-W., Chi, Y.-I., Holbrook, E.L., Cater, R.J. and Holbrook, S.R. (1998) Biochemistry. 37, 11726-11731.
16. Gutell, R.R., Larsen, N. and Woese, C.R. (1994) Microbiol. Rev., 58, 10-26.
17. Michel, F., Umesono, K. and Ozeki, H. (1989) Gene, 82, 5-30.
18. Michel, F. and Westhof, E. (1990) J. Mol. Biol., 216, 585-610.
19. Strobel, S.A., Cech, T.R., Usman, N. and Beigelman, L. (1994) Biochemistry, 33, 13824-13835.
20. Bass, B.L. and Weintraub, H. (1987) Cell, 48, 607-613.
21. Biswas, R. and Sundaralingam, M. (1997) J. Mol. Biol., 270, 511-519.
22. Biswas, R., Wahl, M.C., Ban, C. and Sundaralingam, M. (1997) J. Mol. Biol., 267, 1149-1156.
23. Green, R., Szostak, J.W., Benner, S.A., Rich, A. and Usman, N. (1991) Nucleic Acids Res., 19, 4161-4166.
24. Navaza, J. (1994) Acta Crystallogr., A50, 157-163.
25. Portmann, S., Usman, N. and Egli, M. (1995) Biochemistry, 34, 7569-7575.
26. Brunger, A.T. (1992) XPLOR Manual, v.3.0. Yale University Press, New Haven, CT.
27. Berman, H.M., Olson, W.K., Beveridge, D.L., Westbrook, J., Gelbin, A., Demeny, T., Hsieh, S.H., Srinivasan, A.R. and Schneider, B. (1992) Biophys. J., 63, 751-759.
28. Lavery, R. and Sklenar, H. (1989) J. Biomol. Struct. Dyn., 4, 655-667.
29. Holbrook, S.R., Cheong, C., Tinoco, I., Jr and Kim, S.-H. (1991) Nature, 353, 579-581.
30. Baeyens, K.J., Debondt, H.L. and Holbrook, S.R. (1995) Nature Struct. Biol., 2, 56-63.
31. Ramakrishnan, B. and Sundaralingam, M. (1995) Biophys. J., 69, 553-558.
32. Betzel, C. Lorenz, S., Futste, J.P., Zhang, M., Schneider, T.R., Wilson, K.S. and Erdmann, V.A. (1994) FEBS Lett.. 351, 159-164.
33. Seeman, N.C., Rosenberg, J.M., Suddath, F.L., Kim, J.J.P. and Rich, A. (1976) J. Mol. Biol., 104, 109-144.