-
1
-
-
0024472699
-
The conserved U·G pair in the 5′ splice site duplex of a group I intron is required in the first but not the second step of self-palicing
-
Barfod E. T., Cech T. R. The conserved U·G pair in the 5′ splice site duplex of a group I intron is required in the first but not the second step of self-palicing. Mol. Cell. Biol. 9:1989;3657-3666.
-
(1989)
Mol. Cell. Biol.
, vol.9
, pp. 3657-3666
-
-
Barfod, E.T.1
Cech, T.R.2
-
2
-
-
0028146491
-
Crystal structure of domain A of Thermus flavus 5S rRNA and the contribution of water molecules to its structure
-
Betzel C., Lorenz S., Fiirste J. P., Bald R., Zhang M., Schneider T. R., Wilson K. S., Erdmann V. A. Crystal structure of domain A of Thermus flavus 5S rRNA and the contribution of water molecules to its structure. FEBS Letters. 351:1994;159-164.
-
(1994)
FEBS Letters
, vol.351
, pp. 159-164
-
-
Betzel, C.1
Lorenz, S.2
Fiirste, J.P.3
Bald, R.4
Zhang, M.5
Schneider, T.R.6
Wilson, K.S.7
Erdmann, V.A.8
-
3
-
-
0025648066
-
Local variability and base sequence effects in DNA crystal structures
-
Bhattacharyya D., Bansal M. Local variability and base sequence effects in DNA crystal structures. J. Biomol. Struct. Dynam. 8:1990;539-572.
-
(1990)
J. Biomol. Struct. Dynam.
, vol.8
, pp. 539-572
-
-
Bhattacharyya, D.1
Bansal, M.2
-
6
-
-
0020385863
-
Mechanisms of sequence-dependent stacking of bases in B -DNA
-
Calladine C. R. Mechanisms of sequence-dependent stacking of bases in B -DNA. J. Mol. Biol. 161:1982;343-352.
-
(1982)
J. Mol. Biol.
, vol.161
, pp. 343-352
-
-
Calladine, C.R.1
-
7
-
-
0021770861
-
A base-centred explanation of the B -to- A transition in DNA
-
Calladine C. R., Drew H. R. A base-centred explanation of the B -to- A transition in DNA. J. Mol. Biol. 178:1984;773-782.
-
(1984)
J. Mol. Biol.
, vol.178
, pp. 773-782
-
-
Calladine, C.R.1
Drew, H.R.2
-
8
-
-
0023364038
-
The chemistry of self-splicing RNA and RNA enzymes
-
Cech T. R. The chemistry of self-splicing RNA and RNA enzymes. Science. 236:1987;1532-1539.
-
(1987)
Science
, vol.236
, pp. 1532-1539
-
-
Cech, T.R.1
-
9
-
-
0013936167
-
Codon-anticodon pairing: The wobble hypothesis
-
Crick F. H. C. Codon-anticodon pairing: the wobble hypothesis. J. Mol. Biol. 19:1966;548-555.
-
(1966)
J. Mol. Biol.
, vol.19
, pp. 548-555
-
-
Crick, F.H.C.1
-
10
-
-
0028206986
-
Structure of a mispaired RNA double helix at 1.6-Å resolution and implications for the prediction of RNA secondary structures
-
Cruse W. B. T., Saludjian P., Biala E., Strazewski P., Prange T., Kennard O. Structure of a mispaired RNA double helix at 1.6-Å resolution and implications for the prediction of RNA secondary structures. Proc. Natl Acad. Sci., USA. 91:1994;4160-4164.
-
(1994)
Proc. Natl Acad. Sci., USA
, vol.91
, pp. 4160-4164
-
-
Cruse, W.B.T.1
Saludjian, P.2
Biala, E.3
Strazewski, P.4
Prange, T.5
Kennard, O.6
-
11
-
-
0020619672
-
Base sequence and helix structure variation in B and A DNA
-
Dickerson R. E. Base sequence and helix structure variation in B and A DNA. J. Mol. Biol. 166:1983;419-441.
-
(1983)
J. Mol. Biol.
, vol.166
, pp. 419-441
-
-
Dickerson, R.E.1
-
12
-
-
0023766092
-
2
-
2. Nature. 335:1988;375-378.
-
(1988)
Nature
, vol.335
, pp. 375-378
-
-
Dock-Bregeon, A.C.1
Cheerier, B.2
Podjarny, A.3
Moras, D.4
Debear, J.S.5
Gough, G.R.6
Gilham, P.T.7
Johnson, J.E.8
-
13
-
-
0024469851
-
2
-
2. J. Mol. Biol. 209:1989;459-474.
-
(1989)
J. Mol. Biol.
, vol.209
, pp. 459-474
-
-
Dock-Bregeon, A.C.1
Cheerier, B.2
Podjarny, A.3
Johnson, J.4
Debear, J.S.5
Gough, G.R.6
Gilham, P.T.7
Moras, D.8
-
14
-
-
0023040892
-
Free energy contributions of G·U and other terminal mismatches to helix stability
-
Freier S. M., Kierzek R., Caruthers M. H., Neilson T., Turner D. H. Free energy contributions of G·U and other terminal mismatches to helix stability. Biochemistry. 25:1986a;3209-3213.
-
(1986)
Biochemistry
, vol.25
, pp. 3209-3213
-
-
Freier, S.M.1
Kierzek, R.2
Caruthers, M.H.3
Neilson, T.4
Turner, D.H.5
-
15
-
-
0000075467
-
Improved free-energy parameters for predictions of RNA duplex stability
-
Freier S. M., Kierzek R., Jaeger J., Sugimoto N., Caruthers M. H., Neilson T., Turner D. H. Improved free-energy parameters for predictions of RNA duplex stability. Proc. Natl Acad. Sci., USA. 83:1986b;9373-9377.
-
(1986)
Proc. Natl Acad. Sci., USA
, vol.83
, pp. 9373-9377
-
-
Freier, S.M.1
Kierzek, R.2
Jaeger, J.3
Sugimoto, N.4
Caruthers, M.H.5
Neilson, T.6
Turner, D.H.7
-
16
-
-
0029382234
-
G·U base pairing motifs in ribosomal RNA
-
Gautheret D., Konings D., Gutell R. G·U base pairing motifs in ribosomal RNA. RNA. 1:1995;807-814.
-
(1995)
RNA
, vol.1
, pp. 807-814
-
-
Gautheret, D.1
Konings, D.2
Gutell, R.3
-
17
-
-
0028261409
-
Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective
-
Gutell R. R., Larsen N., Woese C. R. Lessons from an evolving rRNA: 16S and 23S rRNA structures from a comparative perspective. Microbiol. Rev. 58:1994;10-26.
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 10-26
-
-
Gutell, R.R.1
Larsen, N.2
Woese, C.R.3
-
18
-
-
0026335264
-
Nearest neighbor parameters for G·U mismatches: GU/UG is destabilizing in the contexts CGUG/GUGC, UGUA/AUGU, and AGUU/UUGA but stabilizing in GGUC/CUGG
-
He L., Kierzek R., SantaLucia J. J., Walter A. E., Turner D. H. Nearest neighbor parameters for G·U mismatches: GU/UG is destabilizing in the contexts CGUG/GUGC, UGUA/AUGU, and AGUU/UUGA but stabilizing in GGUC/CUGG. Biochemistry. 30:1991;11124-11132.
-
(1991)
Biochemistry
, vol.30
, pp. 11124-11132
-
-
He, L.1
Kierzek, R.2
Santalucia, J.J.3
Walter, A.E.4
Turner, D.H.5
-
19
-
-
0026000848
-
Crystal structure of an RNA double helix incorporating a track of non-Watson-Crick base pairs
-
Holbrook S. R., Cheong C., Tinoco I., Jr, Kim S. H. Crystal structure of an RNA double helix incorporating a track of non-Watson-Crick base pairs. Nature. 353:1991;5799-5581.
-
(1991)
Nature
, vol.353
, pp. 5799-5581
-
-
Holbrook, S.R.1
Cheong, C.2
Tinoco, I.3
Jr4
Kim, S.H.5
-
20
-
-
0024284965
-
A simple structural feature is a major determinant of the identity of a transfer RNA
-
Hou Y. M., Schimmel P. A simple structural feature is a major determinant of the identity of a transfer RNA. Nature. 333:1988;140-145.
-
(1988)
Nature
, vol.333
, pp. 140-145
-
-
Hou, Y.M.1
Schimmel, P.2
-
21
-
-
0023664744
-
Structure of guanosine-thymidine mismatches in B -DNA at 2.5-Å resolution
-
Hunter W. N., Brown T., Kneale G., Anand N. V., Rabinovich D., Kennard O. Structure of guanosine-thymidine mismatches in B -DNA at 2.5-Å resolution. J. Biol. Chem. 262:1987;9962-9970.
-
(1987)
J. Biol. Chem.
, vol.262
, pp. 9962-9970
-
-
Hunter, W.N.1
Brown, T.2
Kneale, G.3
Anand, N.V.4
Rabinovich, D.5
Kennard, O.6
-
22
-
-
0022429756
-
G·T base-pairs in a DNA helix: The crystal structure of d(G-G-G-G-T-C-C-C)
-
Kneale G., Brown T., Kennard O. G·T base-pairs in a DNA helix: the crystal structure of d(G-G-G-G-T-C-C-C). J. Mol. Biol. 186:1985;805-814.
-
(1985)
J. Mol. Biol.
, vol.186
, pp. 805-814
-
-
Kneale, G.1
Brown, T.2
Kennard, O.3
-
23
-
-
0024279871
-
Changing the identity of a tRNA by introducing a G-U wobble pair near the 3′ acceptor end
-
McClain W. H., Floss K. Changing the identity of a tRNA by introducing a G-U wobble pair near the 3′ acceptor end. Science. 240:1988a;793-796.
-
(1988)
Science
, vol.240
, pp. 793-796
-
-
McClain, W.H.1
Floss, K.2
-
26
-
-
0018086876
-
Stacking of Crick wobble pair and Watson-Crick pair: Stability rules of G-U pairs at ends of helical stems in tRNAs and the relation to codon-anticodon wobble interaction
-
Mizuno H., Sundaralingam M. Stacking of Crick wobble pair and Watson-Crick pair: stability rules of G-U pairs at ends of helical stems in tRNAs and the relation to codon-anticodon wobble interaction. Nucl. Acids Res. 5:1978;4451-4461.
-
(1978)
Nucl. Acids Res.
, vol.5
, pp. 4451-4461
-
-
Mizuno, H.1
Sundaralingam, M.2
-
27
-
-
0024278234
-
Structure of the mismatched duplex d(GGGTGCCC) and one of its Watson-Crick analogues d(GGGCGCCC)
-
Rabinovich D., Haran T., Eisenstein M., Shakked Z. Structure of the mismatched duplex d(GGGTGCCC) and one of its Watson-Crick analogues d(GGGCGCCC). J. Mol. Biol. 200:1988;151-161.
-
(1988)
J. Mol. Biol.
, vol.200
, pp. 151-161
-
-
Rabinovich, D.1
Haran, T.2
Eisenstein, M.3
Shakked, Z.4
-
28
-
-
0025975057
-
Pre-mRNA splicing in yeast
-
Ruby S. W., Abelson J. Pre-mRNA splicing in yeast. Trends Genet. 7:1991;79-85.
-
(1991)
Trends Genet.
, vol.7
, pp. 79-85
-
-
Ruby, S.W.1
Abelson, J.2
-
30
-
-
0029100233
-
Predicting thermodynamic properties of RNA
-
Serra M. J., Turner D. H. Predicting thermodynamic properties of RNA. Methods Enzymol. 259:1995;242-261.
-
(1995)
Methods Enzymol.
, vol.259
, pp. 242-261
-
-
Serra, M.J.1
Turner, D.H.2
-
31
-
-
0028955347
-
Minor groove recognition of the conserved G·U pair at the Tetrahymena ribozyme reaction site
-
Strobel A. A., Chech T. R. Minor groove recognition of the conserved G·U pair at the Tetrahymena ribozyme reaction site. Science. 267:1995;675-679.
-
(1995)
Science
, vol.267
, pp. 675-679
-
-
Strobel, A.A.1
Chech, T.R.2
-
32
-
-
0023055766
-
Energetics of internal G·U mismatches in ribooligonucleotide helices
-
Sugimoto N., Kierzek R., Freier S. M., Turner D. H. Energetics of internal G·U mismatches in ribooligonucleotide helices. Biochemistry. 25:1986;5755-5759.
-
(1986)
Biochemistry
, vol.25
, pp. 5755-5759
-
-
Sugimoto, N.1
Kierzek, R.2
Freier, S.M.3
Turner, D.H.4
-
34
-
-
0030497977
-
Structure of the purine-pyrimidine alternating RNA double helix, r(GUAUAUA)d(C), with a 3′-terminal deoxy residue
-
Wahl M. C., Ban C., Sekharudu C., Ramakrishnan B., Sundaralingam M. Structure of the purine-pyrimidine alternating RNA double helix, r(GUAUAUA)d(C), with a 3′-terminal deoxy residue. Acta Crystallog. sect. D. 52:1996a;655-667.
-
(1996)
Acta Crystallog. Sect. D
, vol.52
, pp. 655-667
-
-
Wahl, M.C.1
Ban, C.2
Sekharudu, C.3
Ramakrishnan, B.4
Sundaralingam, M.5
-
35
-
-
0030514003
-
RNA: Synthesis, purification and crystallization
-
Wahl M. C., Ramakrishnan B., Ban C., Xin C., Sundaralingam M. RNA: synthesis, purification and crystallization. Acta Crystallog. sect. D. 52:1996b;668-675.
-
(1996)
Acta Crystallog. Sect. D
, vol.52
, pp. 668-675
-
-
Wahl, M.C.1
Ramakrishnan, B.2
Ban, C.3
Xin, C.4
Sundaralingam, M.5
-
36
-
-
0021012648
-
Detailed analysis of the higher order structue of 16S-like ribosomal nucleic acids
-
Woese C. R., Gutell R., Gupta R., Noller H. F. Detailed analysis of the higher order structue of 16S-like ribosomal nucleic acids. Microbiol. Rev. 47:1983;621-669.
-
(1983)
Microbiol. Rev.
, vol.47
, pp. 621-669
-
-
Woese, C.R.1
Gutell, R.2
Gupta, R.3
Noller, H.F.4
-
37
-
-
0028917227
-
A periodic table of symmetric tandem mismatches in RNA
-
Wu M., McDowell J. A., Turner D. H. A periodic table of symmetric tandem mismatches in RNA. Biochemistry. 34:1995;3204-3211.
-
(1995)
Biochemistry
, vol.34
, pp. 3204-3211
-
-
Wu, M.1
McDowell, J.A.2
Turner, D.H.3
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