-
1
-
-
0028358431
-
The RNA-polymerase I transcription factor UBF is a sequence-tolerant HMG-box protein that can recognize structured nucleic acids
-
Copenhaver, G.P., C.D. Putnam, M.L. Denton, and C.S Pikaard. 1994. The RNA-polymerase I transcription factor UBF is a sequence-tolerant HMG-box protein that can recognize structured nucleic acids. Nucleic Acids Res. 22: 2651-2657.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 2651-2657
-
-
Copenhaver, G.P.1
Putnam, C.D.2
Denton, M.L.3
Pikaard, C.S.4
-
2
-
-
0028856773
-
Efficient amplification using 'megaprimer' by asymmetric polymerase chain reaction
-
Datta, A.K. 1995. Efficient amplification using 'megaprimer' by asymmetric polymerase chain reaction. Nucleic Acids Res. 23: 4530-4531.
-
(1995)
Nucleic Acids Res.
, vol.23
, pp. 4530-4531
-
-
Datta, A.K.1
-
3
-
-
0028145628
-
Identification of comS, a gene of the srfa operon that regulates the establishment of genetic competence in Bacillus subtilis
-
D'Souza, C., M.M. Nakano, and P. Zuber. 1994. Identification of comS, a gene of the srfA operon that regulates the establishment of genetic competence in Bacillus subtilis. Proc. Natl. Acad. Sci. 91: 9397-9401.
-
(1994)
Proc. Natl. Acad. Sci.
, vol.91
, pp. 9397-9401
-
-
D'Souza, C.1
Nakano, M.M.2
Zuber, P.3
-
4
-
-
0001768901
-
Genetic exchange and homologous recombination
-
(ed. A.L. Sonenshein, J.A. Hoch, and R. Losick), American Society for Microbiology, Washington, D.C.
-
Dubnau, D. 1993. Genetic exchange and homologous recombination. In Bacillus subtilis and other Gram-positive bacteria (ed. A.L. Sonenshein, J.A. Hoch, and R. Losick), pp. 555-584. American Society for Microbiology, Washington, D.C.
-
(1993)
Bacillus Subtilis and Other Gram-positive Bacteria
, pp. 555-584
-
-
Dubnau, D.1
-
5
-
-
0021252896
-
Sequences of the malE gene and of its product, the maltose-binding protein of Escherichia coli K12
-
Duplay, P., H. Bedouelle, A. Fowler, I. Zabin, W. Saurin, and M. Hofnung. 1984. Sequences of the malE gene and of its product, the maltose-binding protein of Escherichia coli K12. J. Biol. Chem. 259: 10606-10613.
-
(1984)
J. Biol. Chem.
, vol.259
, pp. 10606-10613
-
-
Duplay, P.1
Bedouelle, H.2
Fowler, A.3
Zabin, I.4
Saurin, W.5
Hofnung, M.6
-
6
-
-
0026439782
-
SRY, like HMG1, recognizes sharp angles in DNA
-
Ferrari, S., V.R. Harley, A. Pontiggia, P.N. Goodfellow, R. Lovell-Badge, and M. Bianchi. 1992. SRY, like HMG1, recognizes sharp angles in DNA. EMBO J. 11: 4497-4506.
-
(1992)
EMBO J.
, vol.11
, pp. 4497-4506
-
-
Ferrari, S.1
Harley, V.R.2
Pontiggia, A.3
Goodfellow, P.N.4
Lovell-Badge, R.5
Bianchi, M.6
-
7
-
-
0028303273
-
Short peptide fragments derived from HMG-I/Y proteins bind specifically to the minor groove of DNA
-
Geierstanger, B.H., B.F. Volkman, W. Kremer, and D.E. Wemmer. 1994. Short peptide fragments derived from HMG-I/Y proteins bind specifically to the minor groove of DNA. Biochemistry 33: 5347-5355.
-
(1994)
Biochemistry
, vol.33
, pp. 5347-5355
-
-
Geierstanger, B.H.1
Volkman, B.F.2
Kremer, W.3
Wemmer, D.E.4
-
8
-
-
0028197368
-
HMG domain proteins: Architectural elements in the assembly of nucleoprotein structures
-
Grosschedl, R., K. Giese, and J. Pagel. 1994. HMG domain proteins: Architectural elements in the assembly of nucleoprotein structures. Trends Genet. 10: 94-100.
-
(1994)
Trends Genet.
, vol.10
, pp. 94-100
-
-
Grosschedl, R.1
Giese, K.2
Pagel, J.3
-
9
-
-
0029565061
-
Genetic networks controlling the initiation of sporulation and the development of genetic competence in Bacillus subtilis
-
Grossman, A.D. 1995. Genetic networks controlling the initiation of sporulation and the development of genetic competence in Bacillus subtilis. Annu. Rev. Genet. 29: 477-508.
-
(1995)
Annu. Rev. Genet.
, vol.29
, pp. 477-508
-
-
Grossman, A.D.1
-
10
-
-
0028114044
-
The regulation of competence transcription factor synthesis constitutes a critical control point in the regulation of competence in Bacillus subtilis
-
Hahn, J., L. Kong, and D. Dubnau. 1994. The regulation of competence transcription factor synthesis constitutes a critical control point in the regulation of competence in Bacillus subtilis. J. Bacteriol. 176: 5733-5761.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 5733-5761
-
-
Hahn, J.1
Kong, L.2
Dubnau, D.3
-
11
-
-
0029039416
-
The major role of SpoOA in genetic competence is to downregulate abrB, an essential competence gene
-
Hahn, J., M. Roggiani, and D. Dubnau. 1995. The major role of SpoOA in genetic competence is to downregulate abrB, an essential competence gene. J. Bacteriol. 177: 3601-3605.
-
(1995)
J. Bacteriol.
, vol.177
, pp. 3601-3605
-
-
Hahn, J.1
Roggiani, M.2
Dubnau, D.3
-
12
-
-
0029747160
-
Regulatory inputs for the synthesis of ComK, the competence transcription factor of Bacillus subtilis
-
Hahn, J., A. Luttinger, and D. Dubnau. 1996. Regulatory inputs for the synthesis of ComK, the competence transcription factor of Bacillus subtilis. Mol. Microbiol. 21: 763-775.
-
(1996)
Mol. Microbiol.
, vol.21
, pp. 763-775
-
-
Hahn, J.1
Luttinger, A.2
Dubnau, D.3
-
13
-
-
0028945952
-
Expression of the ATP-dependent deoxyribonuclease of Bacillus subtilis is under competence-mediated control
-
Haijema, B.J., L.W. Hamoen, J. Kooistra, G. Venema, and D. Van Sinderen. 1995. Expression of the ATP-dependent deoxyribonuclease of Bacillus subtilis is under competence-mediated control. Mol. Microbiol. 15: 203-211.
-
(1995)
Mol. Microbiol.
, vol.15
, pp. 203-211
-
-
Haijema, B.J.1
Hamoen, L.W.2
Kooistra, J.3
Venema, G.4
Van Sinderen, D.5
-
14
-
-
0029835935
-
Regulated expression of the dinR and recA genes during competence development and SOS induction in Bacillus subtilis
-
Haijema, B.J., D. Van Sinderen, K. Winterling, J. Kooistra, G. Venema, and L.W. Hamoen. 1996. Regulated expression of the dinR and recA genes during competence development and SOS induction in Bacillus subtilis. Mol. Microbiol. 22: 75-85.
-
(1996)
Mol. Microbiol.
, vol.22
, pp. 75-85
-
-
Haijema, B.J.1
Van Sinderen, D.2
Winterling, K.3
Kooistra, J.4
Venema, G.5
Hamoen, L.W.6
-
15
-
-
0028964280
-
A small gene, designated comS, located within the coding region of the fourth amino acid-activation domain of srfA, is required for competence development in Bacillus subtilis
-
Hamoen, L.W., H. Eshuis, J. Jongbloed, G. Venema, and D. Van Sinderen. 1995. A small gene, designated comS, located within the coding region of the fourth amino acid-activation domain of srfA, is required for competence development in Bacillus subtilis. Mol. Microbiol. 15: 55-63.
-
(1995)
Mol. Microbiol.
, vol.15
, pp. 55-63
-
-
Hamoen, L.W.1
Eshuis, H.2
Jongbloed, J.3
Venema, G.4
Van Sinderen, D.5
-
16
-
-
0002367719
-
Optimization of PCRs
-
(ed. M.A. Innes, D.H. Gelfand, J.J. Sninsky, and T.J. White), Academic Press, San Diego, CA
-
Innes, M.A. and D.H. Gelfand. 1990. Optimization of PCRs. In PCR protocols: A guide to methods and applications (ed. M.A. Innes, D.H. Gelfand, J.J. Sninsky, and T.J. White), pp. 3-12. Academic Press, San Diego, CA.
-
(1990)
PCR Protocols: A Guide to Methods and Applications
, pp. 3-12
-
-
Innes, M.A.1
Gelfand, D.H.2
-
17
-
-
0024814234
-
Bending of DNA by gene-regulatory proteins: Construcion and use of a DNA bending vector
-
Kim, J., C. Zwieb, C. Wu, and S. Adhya. 1989. Bending of DNA by gene-regulatory proteins: Construcion and use of a DNA bending vector. Gene 85: 15-23.
-
(1989)
Gene
, vol.85
, pp. 15-23
-
-
Kim, J.1
Zwieb, C.2
Wu, C.3
Adhya, S.4
-
18
-
-
0028245470
-
Regulation of competence-specific gene expression by Mec-mediated protein-protein interaction in Bacillus subtilis
-
Kong, L. and D. Dubnau. 1994. Regulation of competence-specific gene expression by Mec-mediated protein-protein interaction in Bacillus subtilis. Proc. Natl. Acad. Sci. 91: 5793-5797.
-
(1994)
Proc. Natl. Acad. Sci.
, vol.91
, pp. 5793-5797
-
-
Kong, L.1
Dubnau, D.2
-
19
-
-
0022477409
-
DNA bending at adenine-thymine tracts
-
Koo, H., H. Wu, and D.M. Crothers. 1986. DNA bending at adenine-thymine tracts. Nature 320: 501-506.
-
(1986)
Nature
, vol.320
, pp. 501-506
-
-
Koo, H.1
Wu, H.2
Crothers, D.M.3
-
20
-
-
0026490544
-
Use of gel retardation to analyze protein-nucleic acid interactions
-
Lane, D., P. Prentki, and M. Chandler. 1992. Use of gel retardation to analyze protein-nucleic acid interactions. Microbiol. Rev. 56: 509-528.
-
(1992)
Microbiol. Rev.
, vol.56
, pp. 509-528
-
-
Lane, D.1
Prentki, P.2
Chandler, M.3
-
21
-
-
2642679186
-
-
Madison, WI
-
Liu, L., M.M. Nakano, O.H. Lee, and P. Zuber. 1996. Presented at the 12th International Spores Conference, Madison, WI.
-
(1996)
12th International Spores Conference
-
-
Liu, L.1
Nakano, M.M.2
Lee, O.H.3
Zuber, P.4
-
22
-
-
0028284877
-
Biochemical and genetic characterization of a competence pheromone from B. subtilis
-
Magnuson, R., J. Solomon, and A.D. Grossman. 1994. Biochemical and genetic characterization of a competence pheromone from B. subtilis. Cell 77: 207-216.
-
(1994)
Cell
, vol.77
, pp. 207-216
-
-
Magnuson, R.1
Solomon, J.2
Grossman, A.D.3
-
23
-
-
0025371331
-
Transcriptional regulation of comC: Evidence for a competence-specific factor in Bacillus subtilis
-
Mohan, S. and D. Dubnau. 1990. Transcriptional regulation of comC: Evidence for a competence-specific factor in Bacillus subtilis. J. Bacteriol. 172: 4064-4071.
-
(1990)
J. Bacteriol.
, vol.172
, pp. 4064-4071
-
-
Mohan, S.1
Dubnau, D.2
-
24
-
-
0028284792
-
MecB of Bacillus subtilis is a pleiotropic regulator of the ClpC ATPase family, controlling competence gene expression and survival at high temperature
-
Msadek, T., F. Kunst, and G. Rapoport. 1994. MecB of Bacillus subtilis is a pleiotropic regulator of the ClpC ATPase family, controlling competence gene expression and survival at high temperature. Proc. Natl. Acad. Sci. 91: 5788-5792.
-
(1994)
Proc. Natl. Acad. Sci.
, vol.91
, pp. 5788-5792
-
-
Msadek, T.1
Kunst, F.2
Rapoport, G.3
-
25
-
-
0024447721
-
Cloning and characterization of srfB, a regulatory gene involved in surfactin production and competence in Bacillus subtilis
-
Nakano, M.M. and P. Zuber. 1989. Cloning and characterization of srfB, a regulatory gene involved in surfactin production and competence in Bacillus subtilis. J. Bacteriol. 171: 5347-5353.
-
(1989)
J. Bacteriol.
, vol.171
, pp. 5347-5353
-
-
Nakano, M.M.1
Zuber, P.2
-
26
-
-
0024968107
-
The MerR heavy metal receptor mediates positive activation in a topologically novel transcription complex
-
O'Halloran, T.V., B. Frantz, M.K. Shin, D.M. Ralston, and J.G. Wright. 1989. The MerR heavy metal receptor mediates positive activation in a topologically novel transcription complex. Cell 56: 119-129.
-
(1989)
Cell
, vol.56
, pp. 119-129
-
-
O'Halloran, T.V.1
Frantz, B.2
Shin, M.K.3
Ralston, D.M.4
Wright, J.G.5
-
27
-
-
0028298256
-
Promoters responsive to DNA bending: A common theme in prokaryotic gene expression
-
Perez-Martin, J., F. Rojo, and V. de Lorenzo. 1994. Promoters responsive to DNA bending: A common theme in prokaryotic gene expression. Microbiol. Rev. 58: 268-290.
-
(1994)
Microbiol. Rev.
, vol.58
, pp. 268-290
-
-
Perez-Martin, J.1
Rojo, F.2
De Lorenzo, V.3
-
29
-
-
0030960672
-
Transcriptional activation by recruitment
-
Ptashne, M. and A. Gann. 1997. Transcriptional activation by recruitment. Nature 386: 569-577.
-
(1997)
Nature
, vol.386
, pp. 569-577
-
-
Ptashne, M.1
Gann, A.2
-
30
-
-
0030024412
-
DNA-binding properties of the yeast SWI/ SNF complex
-
Quinn, J., A.M. Fyrberg, R.W. Ganster, M.C. Schmidt, and C.L. Peterson. 1996. DNA-binding properties of the yeast SWI/ SNF complex. Nature 379: 844-847.
-
(1996)
Nature
, vol.379
, pp. 844-847
-
-
Quinn, J.1
Fyrberg, A.M.2
Ganster, R.W.3
Schmidt, M.C.4
Peterson, C.L.5
-
31
-
-
0027318148
-
ComA, a phosphorylated response regulator protein of Bacillus subtilis, binds to the promoter region of srfA
-
Roggiani, M. and D. Dubnau. 1993. ComA, a phosphorylated response regulator protein of Bacillus subtilis, binds to the promoter region of srfA. J. Bacteriol. 175: 3182-3187.
-
(1993)
J. Bacteriol.
, vol.175
, pp. 3182-3187
-
-
Roggiani, M.1
Dubnau, D.2
-
32
-
-
0003903343
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
-
Sambrook, J., E.F. Fritsch, and T. Maniatis. 1989. Molecular cloning: A laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
33
-
-
0029078286
-
Mutational analysis of the putative nucleic acid-binding surface of the cold-shock domain, CspB, revealed an essential role of aromatic and basic residues in binding of single-stranded DNA containing the Y-box motif
-
Schroder, K., P. Graumann, A. Schnuchel, T.A. Holak, and M.A. Marahiel. 1995. Mutational analysis of the putative nucleic acid-binding surface of the cold-shock domain, CspB, revealed an essential role of aromatic and basic residues in binding of single-stranded DNA containing the Y-box motif. Mol. Microbiol. 16: 699-708.
-
(1995)
Mol. Microbiol.
, vol.16
, pp. 699-708
-
-
Schroder, K.1
Graumann, P.2
Schnuchel, A.3
Holak, T.A.4
Marahiel, M.A.5
-
34
-
-
0029837946
-
CodY is required for nutritional repression of Bacillus subtilis genetic competence
-
Serror, P. and A.L. Sonenshein. 1996. CodY is required for nutritional repression of Bacillus subtilis genetic competence. J. Bacteriol. 178: 5910-5915.
-
(1996)
J. Bacteriol.
, vol.178
, pp. 5910-5915
-
-
Serror, P.1
Sonenshein, A.L.2
-
35
-
-
0029959768
-
Purifaction and characterization of an extracellular peptide factor that affects two different developmental pathways in Bacillus subtilis
-
Solomon, J.M., B.A. Lazazzera, and A.D. Grossman. 1996. Purifaction and characterization of an extracellular peptide factor that affects two different developmental pathways in Bacillus subtilis. Genes & Dev. 10: 2014-2024.
-
(1996)
Genes & Dev.
, vol.10
, pp. 2014-2024
-
-
Solomon, J.M.1
Lazazzera, B.A.2
Grossman, A.D.3
-
36
-
-
0001268975
-
Hydroxyl radical "footprinting": High-resolution information about DNA-protein contacts and application to λ repressor and Cro protein
-
Tullius, T.D. and B.A. Dombroski. 1986. Hydroxyl radical "footprinting": High-resolution information about DNA-protein contacts and application to λ repressor and Cro protein. Proc. Natl. Acad. Sci. 83: 5469-5473.
-
(1986)
Proc. Natl. Acad. Sci.
, vol.83
, pp. 5469-5473
-
-
Tullius, T.D.1
Dombroski, B.A.2
-
37
-
-
0023623752
-
Hydroxyl radical footprinting: A high-resolution method for mapping protein-DNA contacts
-
Tullius, T.D., B.A. Dombroski, M.E.A. Churchill, and L. Kam. 1987. Hydroxyl radical footprinting: A high-resolution method for mapping protein-DNA contacts. Methods Enzymol. 155: 537-558.
-
(1987)
Methods Enzymol.
, vol.155
, pp. 537-558
-
-
Tullius, T.D.1
Dombroski, B.A.2
Churchill, M.E.A.3
Kam, L.4
-
38
-
-
0031030242
-
Biochemical characterization of a molecular switch involving the heat shock protein CIpC, which controls the activity of ComK, the competence transcription factor of Bacillus subtilis
-
Turgay, K., L.W. Hamoen, G. Venema, and D. Dubnau. 1997. Biochemical characterization of a molecular switch involving the heat shock protein CIpC, which controls the activity of ComK, the competence transcription factor of Bacillus subtilis. Genes & Dev. 11: 119-128.
-
(1997)
Genes & Dev.
, vol.11
, pp. 119-128
-
-
Turgay, K.1
Hamoen, L.W.2
Venema, G.3
Dubnau, D.4
-
39
-
-
0028170412
-
ComK acts as an autoregulatory control switch in the signal transduction route to competence in Bacillus subtilis
-
Van Sinderen, D. and G. Venema. 1994. ComK acts as an autoregulatory control switch in the signal transduction route to competence in Bacillus subtilis. J. Bacteriol. 176: 5762-5770.
-
(1994)
J. Bacteriol.
, vol.176
, pp. 5762-5770
-
-
Van Sinderen, D.1
Venema, G.2
-
40
-
-
0028341302
-
Molecular cloning and sequence of comK, a gene required for genetic competence in Bacillus subtilis
-
Van Sinderen, D., A. Ten Berge, B.J. Hayema, L. Hamoen, and G. Venema. 1994. Molecular cloning and sequence of comK, a gene required for genetic competence in Bacillus subtilis. Mol. Microbiol. 11: 695-703.
-
(1994)
Mol. Microbiol.
, vol.11
, pp. 695-703
-
-
Van Sinderen, D.1
Ten Berge, A.2
Hayema, B.J.3
Hamoen, L.4
Venema, G.5
-
41
-
-
0028929877
-
Differential expression of two closely related deoxyribonuclease genes, nucA and nucB, in Bacillus subtilis
-
Van Sinderen, D., R. Kiewiet, and G. Venema. 1995a. Differential expression of two closely related deoxyribonuclease genes, nucA and nucB, in Bacillus subtilis. Mol. Microbiol. 15: 213-223.
-
(1995)
Mol. Microbiol.
, vol.15
, pp. 213-223
-
-
Van Sinderen, D.1
Kiewiet, R.2
Venema, G.3
-
42
-
-
0028940059
-
ComK encodes the competence transcription factor, the key regulatory protein for competence development in Bacillus subtilis
-
Van Sinderen, D., A. Luttinger, L. Kong, D. Dubnau, G. Venema, and L. Hamoen. 1995b. ComK encodes the competence transcription factor, the key regulatory protein for competence development in Bacillus subtilis. Mol. Microbiol. 15: 455-462.
-
(1995)
Mol. Microbiol.
, vol.15
, pp. 455-462
-
-
Van Sinderen, D.1
Luttinger, A.2
Kong, L.3
Dubnau, D.4
Venema, G.5
Hamoen, L.6
-
43
-
-
0012580170
-
Fate of transforming deoxyribonucleic acid in Bacillus subtilis
-
Venema, G., R.H. Pritchard, and T. Venema-Schroder. 1965. Fate of transforming deoxyribonucleic acid in Bacillus subtilis. J. Bacteriol. 89: 1250-1255.
-
(1965)
J. Bacteriol.
, vol.89
, pp. 1250-1255
-
-
Venema, G.1
Pritchard, R.H.2
Venema-Schroder, T.3
-
44
-
-
0025865915
-
A thymus-specific member of the HMG protein family regulates the human T Cell receptor Ca enhancer
-
Waterman, M.L., W.H. Fisher, and K.A. Jones. 1991. A thymus-specific member of the HMG protein family regulates the human T Cell receptor Ca enhancer. Genes & Dev. 5: 656-669.
-
(1991)
Genes & Dev.
, vol.5
, pp. 656-669
-
-
Waterman, M.L.1
Fisher, W.H.2
Jones, K.A.3
|