Solution structure of murine macrophage inflammatory protein-2

Biochemistry

Volumn 37, Issue 23, 1998, Pages 8303-8313

  Shao, Weiping ^a   Jerva, L Fred ^b   West, John ^a   Lolis, Elias ^b   Schweitzer, Barry I ^a  

^a FLORIDA HOSPITAL   (United States)

^b YALE UNIVERSITY SCHOOL OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

MACROPHAGE INFLAMMATORY PROTEIN 2;

ARTICLE; MOLECULAR DYNAMICS; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN STRUCTURE; STRUCTURE ANALYSIS; X RAY ANALYSIS;

AMINO ACID SEQUENCE; ANIMALS; CHEMOKINES; CRYSTALLOGRAPHY, X-RAY; DIMERIZATION; MICE; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; MONOKINES; NUCLEAR MAGNETIC RESONANCE, BIOMOLECULAR; PEPTIDES; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; SOLUTIONS; STRUCTURE-ACTIVITY RELATIONSHIP; THERMODYNAMICS;

MURINAE;

EID: 0032499624     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi980112r     Document Type: Article

References (85)

1. Westwick. (1991) in Chemotactic Cyokines: Biology of the Inflammatory Peptide Supergene Family (Lindley, I. J. D., and Kunkel, S. L., Eds.) Plenum Press, New York.
2. Keiner, G., Kennedy, J., Bacon, K., Kleyensteuber, S., Largaespada, D., Jenkins, N., Copeland, N., Bazan, J., Moore, K., and Schall, T. (1994) Science 266, 1395-1399.
3. Pan, Y., Lloyd, C., Zhou, H, Dolich, S., Deeds, J., Gonzalo, J. A., Vath, J., Gosselin, M., Ma, J., Dussault, B., Woolf, E., Alperin, G., Culpepper, J., Gutierriz-Ramos, J. C., and Gearing, D. (1997) Nature 387, 611-617.
4. Sherry, B., and Cerami, A. (1991) Curr. Opin. Immunol. 3, 56-60.
5. Wolpe, S., and Cerami, A. (1989) FASEB J. 3, 2565-2573.
6. Feng, L., Xia, Y., Yoshimura, T., and Wilson, C. B. (1995) J. Clin. Inv. 95, 1009-1017.
7. Kasama, T., Streiter, R., Lukacs, N., Lincoln, P., Burdick, M., and Kunkel, S. (1995) J. Clin. Inv. 95, 2868-2876.
8. Frevert, C. W., Farone, A., Danaee, H., Paulauskis, J. D., and Kobzik, L. (1995) Inflammation 19, 133-142.
9. Standiford, T. J., Strieter, R. M., Lukacs, N. W., and Kunkel, S. L. (1995) J. Immunol. 155, 2222-2229.
10. Calacano, C., Lee, J., Kikly, K., Pitts-Meek, S., Hulgren, B., Wood, W. I., and Moore, M. W. (1994) Science 265, 682-684.
11. Broxmeyer, H. E., Sherry, B., Lu, L., Cooper, S., Carow, C., Wolpe, S. D., and Cerami, A. (1989) J. Exp. Med. 170, 1583-1594.
12. Broxmeyer, H. E., Sherry, B., Lu, L., Cooper, S., Oh, K. O., Tekamp-Olson, P., Kwon, B. S., and Cerami, A. (1990) Blood 76, 1110-1116.
13. Broxmeyer, H. E., Sherry, B., Cooper, S., Ruscetti, F. W., Williams, D. E., Arosio, P., Kwon, B. S., and Cerami, A. (1991) J. Immunol. 147, 2586-2594.
14. Broxmeyer, H. E., Cooper, S., Cacalano, G., Hague, N., Bailish, E., and Moore, M. (1996) J. Exp. Med. 184, 1825-1832.
15. Holmes, W. E., Lee, J., Kuang, W. J., Rice, G. C., and Wood, W. I. (1991) Science 253, 1278-1280.
16. Murphy, B., and Tiffany, H. L. (1991) Science 253, 1280-1283.
17. Wuyts, A., Osselaer, N. V., Haelens, A., Samson, I., Herdewijn, P., Ben-Baruch, A., Oppenheim, J. J., Proost, P., and Van Damme, J. (1997) Biochemistry 36, 2716-2723.
18. Jerva, L. F., Sullivan, G., and Lolis, E. (1997) Protein Sci. 6, 1643-1652.
19. Bozic, C. R., Kolakowaski, L. F. Jr., Gerard, N. P., Garcia-Rodriguez, C., von Uexkull-Guldenband, C., Conklyn, M. J., Breslow, R., Showell, H. J., and Gerard, C. (1995) J. Immunol. 154, 6049-6057.
20. Moser, B., Schumacher, C., von Tscharne, V., dark-Lewis, I., and Baggiolini, M. (1991) J. Biol. Chem. 266, 10666-10671.
21. Petersen, F., Flad, H., and Brandt, E. (1994) J. Immunol. 152, 2467-2478.
22. Bozic, C. R., Gerard, N. P., and Gerard, C. (1996) Am. J. Respir. Cell Mol. Biol. 14, 302-308.
23. Zhang, X., Chen, L., Bancroft, D. P., Lai, C. K., and Maione, T. E. (1994) Biochemistry 33, 8361-8366.
24. St. Charles, R., Walz, D. A., and Edwards, B. F. P. (1989) J. Biol. Chem. 264, 2092-2099.
25. Baldwin, E. T., Weber, I. T., St. Charles, R., Xuan, J.-C., Apella, E., Yamanda, M., Matsushima, K., Edwards, B. F. P., Clore, G. M., Gronenborn, A. M., and Wlodower, A. (1991) Proc. Natl. Acad. Sci. U.S.A. 88, 502-506.
26. Clore, G. M., Appella, E., Yamada, M., Matsushima, K., and Gronenborn, A. (1990) Biochemistry 24, 1689-1696.
27. Fairbrother, W. J., Reilly, D., Colby, T. J., Hesselgesser, J., and Horuk, R. (1993) FEBS Lett. 330, 302-306.
28. Fairbrother, W. J., Reilly, D., Colby, T. J., Hesselgesser, J., and Horuk, R. (1994) J. Mol. Biol. 242, 252-270.
29. Kim, K.-S., Clark-Lewis, I., and Sykes, B. D. (1994) J. Biol. Chem. 269, 32909-32915.
30. Hanzawa, H., Haruyama, H., Watanabe, K., and Tsurufuji, S. (1994) FEBS Lett. 354, 207-212.
31. Malkowski, M. G., Wu, J. Y., Lazar, J. B., Johnson, P. H., and Edwards, B. F. (1995) J. Biol. Chem. 270, 7077-7087.
32. Lodi, P., Garrett, D., Kuszewski, J., Tsang, M., Weatherbeen, J., Leonard, W., Gronenborn, A., and Clore, G. (1994) Science 263, 1762-1767.
33. Skelton, N. J., Aspiras, F., Ogez, J., and Schall, T. J. (1995) Biochemistry 34, 5329-5342.
34. Chung, C., Cooke, R. M., Proudfoot, A. E. I., and Wells, T. N. C. (1995) Biochemistry 34, 9307-9314.
35. Lubkowski, J., Bujacz, G., Boque, L., Domaille, P. J., Handel, T. M., and Wlodawer, A. (1997) Nat. Struct. Biol. 4, 64-69.
36. Kim, K.-S., Rajarathnam, K., Clark-Lewis, L. Sykes, B. D. (1996) FEBS Lett. 395, 277-282.
37. Meunier, S., Bernassau, J. M., Guillemot, J. C., Ferrara, P., and Darbon, H. (1997) Biochemistry 36, 4412-4422.
38. Dealwis, C., Fernandez, E. J., Thompson, D. A., Simon, T. J., Siani, M. A., and Lolis, E. (1998) Proc. Natl. Acad. Sci. U.S.A. (In press).
39. Fairbrother, W. J. and Skelton, N. J. (1996) in Chemoattractant Ligands and Their Receptors (Horuk, R., Ed.) pp 55-86, CRC Press, New York.
40. Rajarathnam, K., Sykes, B. D., Kay, C. M., Dewald, B., Geiser, T., Baggiolini, M., and Clark-Lewis, I. (1994) Science 264, 90-92.
41. Braunschweiler, L., Bodenhausen, G., and Ernst, R. R. (1983) Mol. Phys. 48, 535-560.
42. Bax, A., and Davis, D. G. (1985) J. Magn. Reson. 65, 355-360.
43. Griesinger, C., Otting, G., Wuthrich, K., and Ernst, R. R. (1988) J. Am. Chem. Soc. 110, 7870-7873.
44. Kumar, A., Ernst, R. R., and Wuthrich, K. (1980) Biochem. Biophys. Res. Commun. 95, 1-6.
45. Bodenhausen, G., Kogler, H., and Ernst, R. R. (1984) J. Magn. Reson. 58, 370-388.
46. Bothner-By, A. A., Stephens, R. L., Lee, J. T., Warren, C. D., and Teanloz, R. W. (1984) J. Am. Chem. Soc. 106, 811-813.
47. Rance, M., Sorensen, O. W., Bodenhausen, G., Wagner, G., Ernst, R. R., and Wuthrich, K. (1983) Biochem. Biophys. Res. Commun. 117, 479-485.
48. States, D. J., Haberkorn, R. A., and Ruben, D. J. (1982) J. Magn. Reson. 48, 286-292.
49. Smallcombe, S. H., Patt, S. L., and Keifer, P. A. (1995) J. Magn. Reson., Ser. A 117, 295-303.
50. McCoy, M. A., and Mueller, L. (1992) J. Am. Chem. Soc. 114, 2108-2110.
51. Bodenhausen, G., and Ruben, D. L. (1980) Chem. Phys. Lett. 69, 185-188.
52. Wuthrich, K. (1986) NMR of Proteins and Nucleic Acids, John Wiley & Sons, Inc., New York.
53. Tropp, J. (1980) J. Chem. Phys. 72, 6035-6043.
54. Koning, T. M. G., Boelens, R., and Kaptein, R. (1990) J. Magn. Reson. 90, 111-123.
55. Zuiderweg, E. R. P., Boelens, R., and Kaptein, R. (1985) Biopolymers 24, 601-610.
56. Wagner, G., Braun, W., Havel, T. F., Schaumann, T., Go, N., and Wuthrich, K. (1987) J. Mol. Biol. 196, 611-639.
57. Basu, V. J. (1989) Methods Enzymol. 177, 132-149.
58. Nilges, M. (1993) Proteins: Struct., Funct., Genet. 17, 297-309.
59. Nilges, M. (1995) J. Mol. Biol. 245, 645-660.
60. Fletcher, C. M., Jones, D. N. M., Diamond, R., and Neuhaus, D. (1996) J. Biomol. NMR 8, 292-310.
61. Kim, Y., and Prestegard, J. H. (1989) J. Magn. Reson. 84, 9-13.
62. Clubb, R., T., Fergusen, S. B., Walsh, C. T., and Wagner, G. (1994) Biochemistry 33, 2761-2772.
63. Stein, E. G., Rice, L. M., and Brunger, A. T. (1997) J. Magn. Reson. 124, 154-164.
64. Brunger, A. T. (1992) X-PLOR, Version 3.1. A System for X-ray Crystallography and NMR, Yale University Press, New Haven.
65. Laskowski, R. A., MacArthur, M. W., Moss, D. S., and Thornton, J. M. (1993) J. Appl. Crystallogr. 26, 283-291.
66. Wishart, D. S., Sykes, B. D., and Richards, F. M. (1992) Biochemistry 31, 1647-1651.
67. Kraulis, P. J., Clore, G. M., Nilges. M., Jones, T. A., Petterson, G., Knowles, J., and Gronenborn, A. M. (1989) Biochemistry 28, 7241-7257.
68. Ramachandran, G. N., Ramakrishnan, C., and Sasisekharan, V. (1963) J. Mol. Biol. 7, 95-99.
69. Allen, F. H., and Johnson, O. (1991) Acta Crystallogr., Sect. B 47, 62-67.
70. MacArthur, M. W., and Thornton, J. M. (1993) Proteins 17, 232-251.
71. Hutchinson, E. G., and Thornton, J. M. (1996) Protein Sci. 5, 212-220.
72. Rajarathnam, K., Kay, C. M., Dewald, B., Wolf, M., Baggiolini, M., Clark-Lewis, I., and Sykes, B. D. (1997) J. Biol. Chem. 272, 1725-1729.
73. Clore, G. M., Appella, E., Yamada, M., Matsushima, K., and Gronenborn, A. (1989) J. Biol. Chem. 264, 18907-18911.
74. Rajarathnam, K., Clark-Lewis, I., Dewald, B., Baggiolini, M., and Sykes, B. D. (1996) FEBS Lett. 399, 43-46.
75. Clark-Lewis, I., Dewald, B., Loetscher, M., and Moser, B. (1994) J. Biol. Chem. 269, 16075-16081.
76. Clark-Lewis, I., Schumacher, C., Baggiolini, M., and Moser, B. (1991) J. Biol. Chem. 266, 23128-23134.
77. Clark-Lewis, I. A., Dewald, B., Geiser, T., Moser, B., and Baggiolini, M. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 3574-3577.
78. Hebert, C. A., Vitangcol, R. V., and Baker, J. B. (1991) J. Biol. Chem. 266, 18989-18994.
79. Grasberger, B. L., Gronenborn, A. M., and Clore, G. M. (1993) J. Mol. Biol. 230, 364-372.
80. Nicholls, A., Sharp, K. A., and Honig, B. (1991) Proteins 11, 281-296.
81. Hoogewerf, A. J., Kuschert, G. S. V., Proudfoot, A. E. I., Borlat, F., Clark-Lewis, I., Power, C. A., and Wells, T. N. C. (1997) Biochemistry 36, 13570-13578.
82. Scraufstatter, I. U., Ma, M., Oades, Z. G., Barritt, D. S., and Cochrane, C. G. (1995) J. Biol. Chem. 270, 10428-10431.
83. Hammond, M. E. W., Shymala, V., Siani, M. A., Gallegos, C. A., Feucht, P. H., Abbott, J., Lapointe, G. R., Moghadam, M., Khoja, J., Zakel, J., and Tekamp-Olson, P. (1996) J. Biol. Chem. 271, 8228-8235.
84. Lowman, H. B., Slagle, P. H., DeForge, L. E., Wirth, C. M., Gillece-Castro, B. L., Bourell, J. H., and Fairbrother, W. J. (1996) J. Biol. Chem. 271, 14344-14352.
85. Clubb, R. T., Omichinski, J. G., Clore, G. M., and Gronenborn, A. M. (1994) FEBS Lett. 338, 93-97.