Activation and the role of reinitiation in the control of transcription by RNA polymerase II

Cold Spring Harbor Symposia on Quantitative Biology

Volumn 63, Issue , 1998, Pages 181-188

  Hahn, S ^a  

^a HOWARD HUGHES MEDICAL INSTITUTE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

INITIATION FACTOR; RNA POLYMERASE II; TATA BINDING PROTEIN; TRANSCRIPTION FACTOR; HEAT SHOCK TRANSCRIPTION FACTOR 1; HISTONE; SWI/SNF RELATED MATRIX ASSOCIATED ACTIN DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY B MEMBER 1; TRANSCRIPTION FACTOR IIA;

COMPLEX FORMATION; CONFERENCE PAPER; ENZYME ACTIVITY; GENE CONTROL; GENE EXPRESSION; GENE INDUCTION; GENE MUTATION; GENE REPRESSION; PRIORITY JOURNAL; PROMOTER REGION; START CODON; TATA BOX; TRANSCRIPTION INITIATION; TRANSCRIPTION REGULATION; CARBOXY TERMINAL SEQUENCE; CHROMATIN; ESCHERICHIA COLI; GENETIC TRANSCRIPTION; NONHUMAN; PROTEIN PHOSPHORYLATION; RNA ANALYSIS; RNA SYNTHESIS; RNA TRANSCRIPTION; TRANSCRIPTION ELONGATION;

EID: 0032450982     PISSN: 00917451     EISSN: None     Source Type: Book Series    
DOI: 10.1101/sqb.1998.63.181     Document Type: Conference Paper

References (25)

1. Archambault J., Chambers R.S., Kobor M.S., Ho Y., Cartier M., Bolotin D., Andrews B., Kane C. M., and Greenblatt J. 1997. An essential component of a C-terminal domain phosphatase that interacts with transcription factor IIF in Saccharomyces cerevisiae. Proc. Natl. Acad. Sci. 94: 14300.
2. Arndt K.M., Ricupero-Hovasse S., and Winston F. 1995. TBP mutants defective in activated transcription in vivo. EMBO J. 14: 1490.
3. Auble D.T., Hansen K.E., Mueller C.G.F., Lane W.S., Thorner J., and Hahn S. 1994. Mot1, a global repressor of RNA polymerase II transcription, inhibits TBP binding to DNA by an ATP-dependent mechanism. Genes Dev. 8: 1920.
4. Bannister A.J. and Kouzarides T. 1996. The CBP co-activator is a histone acetyltransferase. Nature 384: 641.
5. Bentley D.L. 1995. Regulation of transcriptional elongation by RNA polymerase II. Curr. Opin. Genet. Dev, 5: 210.
6. Blau J., Xiao H., McCracken S., O'Hare P., Greenblatt J., and Bentley D. 1996. Three functional classes of transcriptional activation domain. Mol. Cell. Biol. 16: 2044.
7. Brown S.A., Weirich C.S., Newton E.M., and Kingston R.E. 1998. Transcriptional activation domains stimulate initiation and elongation at different times and via different residues. EMBO J. 11: 3146.
8. Bryant G.O., Martel L.S., Burley S.K., and Berk A.J. 1996. Radical mutations reveal TATA-box binding protein surfaces required for activated transcription in vivo. Genes Dev. 10: 2491.
9. Bunick D., Zandomeni R., Ackerman S., and Weinmann R. 1982. Mechanism of RNA polymerase II-specific initiation of transcription in vitro: ATP requirement and uncapped runoff transcripts. Cell 29: 877.
10. Buratowski S., Hahn S., Guarente L., and Sharp P.A. 1989. Five intermediate complexes in transcription initiation by RNA polymerase II. Cell 56: 549.
11. Burley S.K. and Roeder R.G. 1996. Biochemistry and structural biology of transcription factor IID (TFIID). Annu. Rev. Biochem. 65: 769.
12. Catron K.M., Zhang H., Marshall S.C., Inostroza J.A., Wilson J.M., and Abate C. 1995. Transcriptional repression by MsxI does not require homeodomain DNA-binding sites. Mol. Cell. Biol. 15: 861.
13. Chao D.M., Gadbois E.L., Murray P.J., Anderson S.F., Sonu M.S., Parvin J.D., and Young R.A. 1996. A mammalian SRB protein associated with an RNA polymerase II holoenzyme. Nature 380: 82.
14. Chi T. and Carey M. 1996. Assembly of the isomerized TFIIA-TFIID-TATA ternary complex is necessary and sufficient for gene activation. Genes Dev. 10: 2540.
15. Chi T., Lieberman P., Ellwood K., and Carey M. 1995. A general mechanism for transcriptional synergy by eukaryotic activators. Nature 377: 254.
16. Dignam J.D., Lebovitz R.M., and Roeder R.G. 1983. Accurate transcription initiation by RNA polymerase II in a soluble extract from isolated mammalian nuclei. Nucleic Acids Res. 11: 1475.
17. Divr A., Tan S., Conaway J.W., and Conaway R.C. 1997. Promoter escape by RNA polymerase II. J. Biol. Chem. 272: 28175.
18. Divr A., Garrett K.P., Chalut C., Egly J.-M., Conaway J.W., and Conaway R.C. 1996. A role for ATP and TFIIH in activation of the RNA pol II preinitiation complex prior to transcription initiation. J. Biol. Chem. 271: 7245.
19. Gadbois E.L., Chao D.M., Reese J.C., Green M.R., and Young R.A. 1997. Functional antagonism between RNA polymerase II holoenzyme and global negative regulator NC2 in vivo. Proc. Natl. Acad. Sci. 94: 3145.
20. Goodrich J.A. and Tjian R. 1994. Transcription factors IIE and IIH and ATP hydrolysis direct promoter clearance by RNA polymerase II. Cell 77: 145.
21. Greenblatt J. 1997. RNA polymerase II holoenzyme and transcriptional regulation. Curr. Opin. Cell Biol. 9: 310.
22. Grunstein M. 1997. Histone acetylation in chromatin structure and transcription. Nature 389: 349.
23. Hahn S. 1993. Transcription: Efficiency in activation. Nature 363: 672.
24. Hampsey M. 1998. Molecular genetics of the RNA polymerase II general transcriptional machinery. Microbiol. Mol. Biol. Rev. 62: 465.
25. Hawley D.K. and Roeder R.G. 1985. Separation and partial characterization of three functional steps in transcription initiation by human RNA polymerase II. J. Biol. Chem. 260: 8163.