메뉴 건너뛰기




Volumn 63, Issue 2, 1998, Pages 625-637

From amplification to gene in thyroid cancer: A high-resolution mapped bacterial-artificial-chromosome resource for cancer chromosome aberrations guides gene discovery after comparative genome hybridization

Author keywords

[No Author keywords available]

Indexed keywords

CONTIG;

EID: 0032231398     PISSN: 00029297     EISSN: None     Source Type: Journal    
DOI: 10.1086/301973     Document Type: Article
Times cited : (58)

References (64)
  • 3
    • 9444227674 scopus 로고    scopus 로고
    • High incidence of chromosomal imbalances and gene amplifications in the classical follicular variant of follicle center lymphoma
    • Bentz M, Werner CA, Dohner H, Joos S, Barth TF, Siebert R, Schroder M, et al (1996) High incidence of chromosomal imbalances and gene amplifications in the classical follicular variant of follicle center lymphoma. Blood 88:1437-1444
    • (1996) Blood , vol.88 , pp. 1437-1444
    • Bentz, M.1    Werner, C.A.2    Dohner, H.3    Joos, S.4    Barth, T.F.5    Siebert, R.6    Schroder, M.7
  • 4
    • 0023145547 scopus 로고
    • The molecular genetics of cancer
    • Bishop JM (1987) The molecular genetics of cancer. Science 235:305-311
    • (1987) Science , vol.235 , pp. 305-311
    • Bishop, J.M.1
  • 5
    • 0030016978 scopus 로고    scopus 로고
    • Genetic screening of head-neck carcinomas using comparative genomic hybridization
    • Bockmuhl U, Petersen I, Schwendel A, Dietel M (1996) Genetic screening of head-neck carcinomas using comparative genomic hybridization. Laryngorhinootologie 75:408-414
    • (1996) Laryngorhinootologie , vol.75 , pp. 408-414
    • Bockmuhl, U.1    Petersen, I.2    Schwendel, A.3    Dietel, M.4
  • 7
    • 0021261878 scopus 로고
    • Amplification of N-myc in untreated human neuroblastomas and related tumors
    • Brodeur GM, Seeger RC, Schwab M, Varmus HE, Bishop JM (1984) Amplification of N-myc in untreated human neuroblastomas and related tumors. Science 224:1121-1124
    • (1984) Science , vol.224 , pp. 1121-1124
    • Brodeur, G.M.1    Seeger, R.C.2    Schwab, M.3    Varmus, H.E.4    Bishop, J.M.5
  • 9
    • 0029997010 scopus 로고    scopus 로고
    • Genetic alterations in untreated metastases and androgen-independent prostate cancer detected by comparative genomic hybridization and allelotyping
    • Cher ML, Bova GS, Moore DH, Carroll PR, Pin SS, Epstein JI, Issacs WB, et al (1996) Genetic alterations in untreated metastases and androgen-independent prostate cancer detected by comparative genomic hybridization and allelotyping. Cancer Res 56:3091-3102
    • (1996) Cancer Res , vol.56 , pp. 3091-3102
    • Cher, M.L.1    Bova, G.S.2    Moore, D.H.3    Carroll, P.R.4    Pin, S.S.5    Epstein, J.I.6    Issacs, W.B.7
  • 10
    • 85031594079 scopus 로고    scopus 로고
    • Genomic mismatch scanning in human: An identity-by-descent genetic linkage methods
    • San Francisco, October 29-November 2
    • Cheung VG, Nelson SF (1996) Genomic mismatch scanning in human: an identity-by-descent genetic linkage methods. Paper presented at the 46th annual meeting of The American Society of Human Genetics, San Francisco, October 29-November 2
    • (1996) 46th Annual Meeting of the American Society of Human Genetics
    • Cheung, V.G.1    Nelson, S.F.2
  • 11
    • 0030859961 scopus 로고    scopus 로고
    • Representation of cloned genomic sequences in two sequencing vectors: Correlation of DNA sequence and subclone distribution
    • Chissoe SL, Marra MA, Hillier L, Brinkman R, Wilson RK, Waterston RH (1997) Representation of cloned genomic sequences in two sequencing vectors: correlation of DNA sequence and subclone distribution. Nucleic Acids Res 25: 2960-2966
    • (1997) Nucleic Acids Res , vol.25 , pp. 2960-2966
    • Chissoe, S.L.1    Marra, M.A.2    Hillier, L.3    Brinkman, R.4    Wilson, R.K.5    Waterston, R.H.6
  • 13
    • 0025776579 scopus 로고
    • A sequence assembly and editing program for efficient management of large projects
    • Dear S, Staden R (1991) A sequence assembly and editing program for efficient management of large projects. Nucleic Acids Res 19:3907-3911
    • (1991) Nucleic Acids Res , vol.19 , pp. 3907-3911
    • Dear, S.1    Staden, R.2
  • 14
    • 0028338927 scopus 로고
    • The human H-ras oncogene induces genomic instability in murine fibroblast within one cell cycle
    • Denko NC, Giaccia AJ, Stringer JR, Stambrook PJ (1994) The human H-ras oncogene induces genomic instability in murine fibroblast within one cell cycle. Proc Natl Acad Sci USA 91:5124-5128
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 5124-5128
    • Denko, N.C.1    Giaccia, A.J.2    Stringer, J.R.3    Stambrook, P.J.4
  • 15
    • 0028339091 scopus 로고
    • Molecular genetics of human thyroid neoplasms
    • Fagin JA (1994) Molecular genetics of human thyroid neoplasms. Annu Rev Med 45:45-52
    • (1994) Annu Rev Med , vol.45 , pp. 45-52
    • Fagin, J.A.1
  • 16
    • 0027455042 scopus 로고
    • High prevalence of mutations of the p53 gene in poorly differentiated human thyroid carcinomas
    • Fagin JA, Matsuo K, Karmakar A, Chen DL, Tang S-H, Koeffler HP (1993) High prevalence of mutations of the p53 gene in poorly differentiated human thyroid carcinomas. J Clin Invest 91:179-184
    • (1993) J Clin Invest , vol.91 , pp. 179-184
    • Fagin, J.A.1    Matsuo, K.2    Karmakar, A.3    Chen, D.L.4    Tang, S.-H.5    Koeffler, H.P.6
  • 17
    • 0027180099 scopus 로고
    • Predisposition to neoplastic transformation caused by gene replacement of H-ras1
    • Finney RE, Bishop JM (1993) Predisposition to neoplastic transformation caused by gene replacement of H-ras1. Science 260:1524-1527
    • (1993) Science , vol.260 , pp. 1524-1527
    • Finney, R.E.1    Bishop, J.M.2
  • 18
    • 0029157147 scopus 로고
    • Comparative genomic hybridization analysis of human sarcomas. II. Identification of novel amplicons at 6p and 17p in osteosarcomas
    • Forus A, Weghuis DO, Smeets D, Fodstad O, Myklebost O, Geurts van Kessel A (1995) Comparative genomic hybridization analysis of human sarcomas. II. Identification of novel amplicons at 6p and 17p in osteosarcomas. Genes Chromosomes Cancer 14:15-21
    • (1995) Genes Chromosomes Cancer , vol.14 , pp. 15-21
    • Forus, A.1    Weghuis, D.O.2    Smeets, D.3    Fodstad, O.4    Myklebost, O.5    Geurts Van Kessel, A.6
  • 19
    • 0028131574 scopus 로고
    • Variations on cycle sequencing
    • Fulton LL, Wilson RK (1994) Variations on cycle sequencing. Biotechniques 17:298-301
    • (1994) Biotechniques , vol.17 , pp. 298-301
    • Fulton, L.L.1    Wilson, R.K.2
  • 20
    • 0030248391 scopus 로고    scopus 로고
    • Comparative genomic hybridization analysis of archival formalin-fixed paraffin-embedded uveal melanomas
    • Ghazvini S, Char DH, Kroll S, Waldman FM, Pinkel D (1996) Comparative genomic hybridization analysis of archival formalin-fixed paraffin-embedded uveal melanomas. Cancer Genet Cytogenet 90:95-101
    • (1996) Cancer Genet Cytogenet , vol.90 , pp. 95-101
    • Ghazvini, S.1    Char, D.H.2    Kroll, S.3    Waldman, F.M.4    Pinkel, D.5
  • 21
  • 22
    • 0028001095 scopus 로고
    • Identification of cryptic sites of DNA sequence amplification in human breast cancer by chromosome microdissection
    • Guan XY, Meltzer PS, Dalton WS, Trent JM (1994) Identification of cryptic sites of DNA sequence amplification in human breast cancer by chromosome microdissection. Nat Genet 8:155-161
    • (1994) Nat Genet , vol.8 , pp. 155-161
    • Guan, X.Y.1    Meltzer, P.S.2    Dalton, W.S.3    Trent, J.M.4
  • 23
    • 0027943920 scopus 로고
    • Comparative genomic hybridization: An overview
    • Houldsworth J, Chaganti RS (1994) Comparative genomic hybridization: an overview. Am J Pathol 145:1253-1260
    • (1994) Am J Pathol , vol.145 , pp. 1253-1260
    • Houldsworth, J.1    Chaganti, R.S.2
  • 24
    • 0030052683 scopus 로고    scopus 로고
    • REL proto-oncogene is frequently amplified in extranodal diffuse large cell lymphoma
    • Houldsworth J, Mathew S, Rao PH, Dyomina K, Louie DC, Parsa N, Offit K, et al (1996) REL proto-oncogene is frequently amplified in extranodal diffuse large cell lymphoma. Blood 87:25-29
    • (1996) Blood , vol.87 , pp. 25-29
    • Houldsworth, J.1    Mathew, S.2    Rao, P.H.3    Dyomina, K.4    Louie, D.C.5    Parsa, N.6    Offit, K.7
  • 28
    • 0028789840 scopus 로고
    • Molecular and cytogenetic characterization of a t(1;10;21) translocation in the human papillary thyroid cancer cell line TPC-1 expressing the ret/H4 chimeric transcript
    • Jossart GH, Karin M, Greulich MS, Allan E, Siperstein MD, Quan Duh MD, Orlo H, et al (1995) Molecular and cytogenetic characterization of a t(1;10;21) translocation in the human papillary thyroid cancer cell line TPC-1 expressing the ret/H4 chimeric transcript. Surgery 118:1018-1023
    • (1995) Surgery , vol.118 , pp. 1018-1023
    • Jossart, G.H.1    Karin, M.2    Greulich, M.S.3    Allan, E.4    Siperstein, M.D.5    Quan Duh, M.D.6    Orlo, H.7
  • 29
    • 0030484739 scopus 로고    scopus 로고
    • A novel multicolor hybridization scheme applied to localization of a transcribed sequence (D10S170/H4) and deletion mapping in the thyroid cancer cell line TPC-1
    • Jossart GH, O'Brien B, Cheng J-F, Tong Q, Jhiang SM, Duh Q, Clark OH, et al (1996) A novel multicolor hybridization scheme applied to localization of a transcribed sequence (D10S170/H4) and deletion mapping in the thyroid cancer cell line TPC-1. Cytogenet Cell Genet 75:254-257
    • (1996) Cytogenet Cell Genet , vol.75 , pp. 254-257
    • Jossart, G.H.1    O'Brien, B.2    Cheng, J.-F.3    Tong, Q.4    Jhiang, S.M.5    Duh, Q.6    Clark, O.H.7
  • 32
    • 0030641589 scopus 로고    scopus 로고
    • Linking chromosomal clues
    • Kallioniemi O-P (1997) Linking chromosomal clues. Nat Genet 15:5-6
    • (1997) Nat Genet , vol.15 , pp. 5-6
    • Kallioniemi, O.-P.1
  • 34
    • 15644368237 scopus 로고    scopus 로고
    • Androgen receptor gene amplification: A possible molecular mechanism for androgen deprivation therapy failure in prostate cancer
    • Koivisto P, Kononen J, Palmberg C, Tammela T, Hyytinen E, Isola J, Trapman J, et al (1997) Androgen receptor gene amplification: a possible molecular mechanism for androgen deprivation therapy failure in prostate cancer. Cancer Res 57:314-319
    • (1997) Cancer Res , vol.57 , pp. 314-319
    • Koivisto, P.1    Kononen, J.2    Palmberg, C.3    Tammela, T.4    Hyytinen, E.5    Isola, J.6    Trapman, J.7
  • 35
    • 0028986730 scopus 로고
    • Human cDNA mapping using a high resolution R-banding technique and fluorescence in situ hybridization
    • Korenberg JR, Chen XN (1995) Human cDNA mapping using a high resolution R-banding technique and fluorescence in situ hybridization. Cytogenet Cell Genet 69:196-200
    • (1995) Cytogenet Cell Genet , vol.69 , pp. 196-200
    • Korenberg, J.R.1    Chen, X.N.2
  • 36
    • 0028889922 scopus 로고
    • Differential expression of protein kinase C isoforms in human colorectal cancers
    • Kuranami M, Powell CT, Hug H, Zeng Z, Cohen AM, Guillem JG (1995) Differential expression of protein kinase C isoforms in human colorectal cancers. J Surg Res 58:233-239
    • (1995) J Surg Res , vol.58 , pp. 233-239
    • Kuranami, M.1    Powell, C.T.2    Hug, H.3    Zeng, Z.4    Cohen, A.M.5    Guillem, J.G.6
  • 37
    • 0030919622 scopus 로고    scopus 로고
    • Cytogenetic and molecular genetic characterization of a chromosome 2 rearrangement in a case of human papillary thyroid carcinoma with radiation history
    • Lehmann L, Greulich KM, Zitzelsberger H, Negele T, Spelsberg F, Bauchinger M, Weier H-U (1997) Cytogenetic and molecular genetic characterization of a chromosome 2 rearrangement in a case of human papillary thyroid carcinoma with radiation history. Cancer Genet Cytogenet 96:30-36
    • (1997) Cancer Genet Cytogenet , vol.96 , pp. 30-36
    • Lehmann, L.1    Greulich, K.M.2    Zitzelsberger, H.3    Negele, T.4    Spelsberg, F.5    Bauchinger, M.6    Weier, H.-U.7
  • 39
    • 0028238133 scopus 로고
    • High-throughput detergent extraction of M13 subclones for fluorescent DNA sequencing
    • Mardis ER (1994) High-throughput detergent extraction of M13 subclones for fluorescent DNA sequencing. Nucleic Adds Res 22:2173-2175
    • (1994) Nucleic Adds Res , vol.22 , pp. 2173-2175
    • Mardis, E.R.1
  • 40
    • 0029449061 scopus 로고
    • Detection of DNA amplifications and deletions in oral squamous cell carcinoma cell lines by comparative genomic hybridization
    • Matsumura K (1995) Detection of DNA amplifications and deletions in oral squamous cell carcinoma cell lines by comparative genomic hybridization. Kokubyo Gakkai Zasshi 62:513-531
    • (1995) Kokubyo Gakkai Zasshi , vol.62 , pp. 513-531
    • Matsumura, K.1
  • 41
    • 0028246725 scopus 로고
    • Chromosomes, genes, and cancer
    • Mitelman F (1994) Chromosomes, genes, and cancer. CA Cancer J Clin 44:133-135
    • (1994) CA Cancer J Clin , vol.44 , pp. 133-135
    • Mitelman, F.1
  • 42
    • 0025185363 scopus 로고
    • Point mutations of ras oncogenes are an early event in thyroid tumongenesis
    • Namba H, Rubin SA, Fagin JA (1990) Point mutations of ras oncogenes are an early event in thyroid tumongenesis. Mol Endocnnol 4:1474-1479
    • (1990) Mol Endocnnol , vol.4 , pp. 1474-1479
    • Namba, H.1    Rubin, S.A.2    Fagin, J.A.3
  • 43
    • 0024276856 scopus 로고
    • A novel phorbol ester receptor/protein kinase, nPKC, distantly related to the protein kinase C family
    • Ohno S, Akita Y, Konno Y, Imajoh S, Suzuki K (1988) A novel phorbol ester receptor/protein kinase, nPKC, distantly related to the protein kinase C family. Cell 53:731-741
    • (1988) Cell , vol.53 , pp. 731-741
    • Ohno, S.1    Akita, Y.2    Konno, Y.3    Imajoh, S.4    Suzuki, K.5
  • 45
    • 0023662114 scopus 로고
    • Identification of three additional members of rat protein kinase C family: Delta-, epsilon-, and zeta-subspecies
    • Ono Y, Fujii T, Ogita K, Kikkawa U, Igarashi K, Nishizuka Y (1987) Identification of three additional members of rat protein kinase C family: delta-, epsilon-, and zeta-subspecies. FEBS Eett 226:125-128
    • (1987) FEBS Eett , vol.226 , pp. 125-128
    • Ono, Y.1    Fujii, T.2    Ogita, K.3    Kikkawa, U.4    Igarashi, K.5    Nishizuka, Y.6
  • 46
    • 0028849283 scopus 로고
    • Comparative genomic hybridization of formalin-fixed, paraffin-embedded breast tumors reveals different patterns of chromosomal gains and losses in fibroadenomas and diploid and aneuploid carcinomas
    • Ried T, Just KE, Holtgreve-Grez H, du Manoir S, Speicher MR, Schrock E, Latham C, et al (1995) Comparative genomic hybridization of formalin-fixed, paraffin-embedded breast tumors reveals different patterns of chromosomal gains and losses in fibroadenomas and diploid and aneuploid carcinomas. Cancer Res 55:5415-5423
    • (1995) Cancer Res , vol.55 , pp. 5415-5423
    • Ried, T.1    Just, K.E.2    Holtgreve-Grez, H.3    Du Manoir, S.4    Speicher, M.R.5    Schrock, E.6    Latham, C.7
  • 47
    • 0029866286 scopus 로고    scopus 로고
    • Comparative genomic hybridization reveals a specific pattern of chromosomal gains and losses during the genesis of colorectal tumors
    • Ried T, Knutzen R, Steinbeck R, Biegen H, Schrock E, Heselmeyer K, du Manoir S, et al (1996) Comparative genomic hybridization reveals a specific pattern of chromosomal gains and losses during the genesis of colorectal tumors. Genes Chromosomes Cancer 15:234-245
    • (1996) Genes Chromosomes Cancer , vol.15 , pp. 234-245
    • Ried, T.1    Knutzen, R.2    Steinbeck, R.3    Biegen, H.4    Schrock, E.5    Heselmeyer, K.6    Du Manoir, S.7
  • 48
    • 0024500964 scopus 로고
    • Unique substrate specificity and regulatory properties of PKC-epsilon: A rationale for diversity
    • Schaap D, Parker PJ, Bristol A, Kriz R, Knopf J (1989) Unique substrate specificity and regulatory properties of PKC-epsilon: a rationale for diversity. FEBS Lett 243:351-357
    • (1989) FEBS Lett , vol.243 , pp. 351-357
    • Schaap, D.1    Parker, P.J.2    Bristol, A.3    Kriz, R.4    Knopf, J.5
  • 49
    • 0023940788 scopus 로고
    • Gene amplification in cultured cells
    • Schimke RT (1988) Gene amplification in cultured cells. J Biol Chem 263:5989-5992
    • (1988) J Biol Chem , vol.263 , pp. 5989-5992
    • Schimke, R.T.1
  • 52
    • 0026703169 scopus 로고
    • Cloning and stable maintenance of a 300-kilobase-pair fragment of human DNA in Escherichia coli using an F-factor-based vector
    • Shizuya HB, Birren B, Kim U-J, Mancino U, Slepac T, Tachiiri T, Simon M (1992) Cloning and stable maintenance of a 300-kilobase-pair fragment of human DNA in Escherichia coli using an F-factor-based vector. Proc Natl Acad Sci USA 89:8794-8797
    • (1992) Proc Natl Acad Sci USA , vol.89 , pp. 8794-8797
    • Shizuya, H.B.1    Birren, B.2    Kim, U.-J.3    Mancino, U.4    Slepac, T.5    Tachiiri, T.6    Simon, M.7
  • 54
    • 0016700864 scopus 로고
    • Detection of specific sequences among DNA fragments separated by gel electrophoresis
    • Southern EM (1975) Detection of specific sequences among DNA fragments separated by gel electrophoresis. J Mol Biol 98:503-517
    • (1975) J Mol Biol , vol.98 , pp. 503-517
    • Southern, E.M.1
  • 57
    • 0029093754 scopus 로고
    • Translocations and amplification of the BCL2 gene are detected in interphase nuclei of non-Hodgkin's lymphoma by in situ hybridization with yeast artificial chromosome clones
    • Taniwaki M, Sliverman GA, Nishida K, Horiike S, Misawa S, Shimazaki C, Miura I, et al (1995) Translocations and amplification of the BCL2 gene are detected in interphase nuclei of non-Hodgkin's lymphoma by in situ hybridization with yeast artificial chromosome clones. Blood 86:1481-1486
    • (1995) Blood , vol.86 , pp. 1481-1486
    • Taniwaki, M.1    Sliverman, G.A.2    Nishida, K.3    Horiike, S.4    Misawa, S.5    Shimazaki, C.6    Miura, I.7
  • 58
    • 0028064785 scopus 로고
    • Increase copy number at 20q13 in breast cancer: Defining the critical region and exclusion of candidate genes
    • Tanner MM, Tirkkonen M, Kalliomemi A, Collins C, Stokke T, Karhu T, Kowbel R, et al (1994) Increase copy number at 20q13 in breast cancer: defining the critical region and exclusion of candidate genes. Cancer Res 54:4257-4260
    • (1994) Cancer Res , vol.54 , pp. 4257-4260
    • Tanner, M.M.1    Tirkkonen, M.2    Kalliomemi, A.3    Collins, C.4    Stokke, T.5    Karhu, T.6    Kowbel, R.7
  • 59
    • 8944227502 scopus 로고    scopus 로고
    • Independent amplification and frequent co-amplification of three nonsyntenic regions on the long arm of chromosome 20 in human breast cancer
    • Tanner MM, Tirkkonen M, Kallioniemi A, Isola J, Kuukasjarvi T, Collins C, Kowbel D, et al (1996) Independent amplification and frequent co-amplification of three nonsyntenic regions on the long arm of chromosome 20 in human breast cancer. Cancer Res 56:3441-3445
    • (1996) Cancer Res , vol.56 , pp. 3441-3445
    • Tanner, M.M.1    Tirkkonen, M.2    Kallioniemi, A.3    Isola, J.4    Kuukasjarvi, T.5    Collins, C.6    Kowbel, D.7
  • 61
    • 0029031775 scopus 로고
    • Detection of chromosomal imbalances in transitional cell carcinoma of the bladder by comparative genomic hybridization
    • Voorter C, Joo S, Bringuier PP, Vallinga M, Poddighe P, Schalken J, du Manoir S, et al (1995) Detection of chromosomal imbalances in transitional cell carcinoma of the bladder by comparative genomic hybridization. Am J Pathol 146: 1341-1354
    • (1995) Am J Pathol , vol.146 , pp. 1341-1354
    • Voorter, C.1    Joo, S.2    Bringuier, P.P.3    Vallinga, M.4    Poddighe, P.5    Schalken, J.6    Du Manoir, S.7
  • 62
    • 0028587038 scopus 로고
    • Construction and characterization of a human chromosome 2 specific BAC library
    • Wang M, Chen X-N, Shouse S, Manson J, Wu Q, Li R, Wrestler J, et al (1994) Construction and characterization of a human chromosome 2 specific BAC library. Genomics 24: 527-534
    • (1994) Genomics , vol.24 , pp. 527-534
    • Wang, M.1    Chen, X.-N.2    Shouse, S.3    Manson, J.4    Wu, Q.5    Li, R.6    Wrestler, J.7
  • 63
    • 0000465745 scopus 로고    scopus 로고
    • Shotgun sequencing
    • Birren B, Green E, Heiter P, Myers R (eds) Cold Spring Harbor Laboratory Press, New York
    • Wilson RK, Mardis ER (1997) Shotgun sequencing. In: Birren B, Green E, Heiter P, Myers R (eds) Genome analysis: a laboratory manual. Vol 1: Analyzing DNA. Cold Spring Harbor Laboratory Press, New York, pp 397-454
    • (1997) Genome Analysis: A Laboratory Manual. Vol 1: Analyzing DNA , vol.1 , pp. 397-454
    • Wilson, R.K.1    Mardis, E.R.2
  • 64


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.