An analysis of analyte-receptor binding kinetics for biosensor applications: Influence of the fractal dimension on the binding rate coefficient

Biosensors and Bioelectronics

Volumn 13, Issue 10, 1998, Pages 1127-1140

  Sadana, Ajit ^a  

^a NONE

Author keywords

Analyte receptor binding; Biosensors; Fractals; Rate coefficient

Indexed keywords

ANTIBODIES; ANTIGENS; CELL IMMOBILIZATION; DNA; ENZYME IMMOBILIZATION; FIBER OPTIC SENSORS; FRACTALS; REACTION KINETICS;

ANALYTE-RECEPTOR BINDING KINETICS;

BIOSENSORS;

ARTICLE; BINDING AFFINITY; BIOSENSOR; MATHEMATICAL ANALYSIS; RECEPTOR AFFINITY; RECEPTOR BINDING;

ANTIGEN-ANTIBODY REACTIONS; BINDING, COMPETITIVE; BIOSENSING TECHNIQUES; DIFFUSION; FIBER OPTICS; FRACTALS; KINETICS; RECEPTORS, CELL SURFACE;

EID: 0032213123     PISSN: 09565663     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0956-5663(98)00005-0     Document Type: Article

References (50)

1. Abel A.P., Weller M.G., Duveneck G.L., Ehrat M., Widmer H.M. Fiber-optic evanescent wave biosensor for the detection of oligonucleotides. Anal. Chem. 68:1996;2905-2912.
2. Anderson, J. 1993. NIH Panel Review Meeting, Case Western Reserve University, Cleveland, OH, July 1993.
3. Blair D.S., Burgess L.W., Brodsky A.M. Evanescent fiber-optic chemical sensor for monitoring volatile organic compounds in water. Anal. Chem. 69:1997;2238-2246.
4. Bluestein R.C., Diaco R., Hutson D.K., Miller W.K., Neelkantan N.V., Pankratz T.J., Tseng S.Y., Vickery E.K. Application of novel chromium dioxide particles to immunoassay development. Clin. Chem. 33(9):1987;1543-1547.
5. Christensen L.L.H. Theoretical analysis of protein concentration determination using biosensor technology under conditions of partial mass transport limitation. Anal. Biochem. 249:1997;153-164.
6. Cuypers, P.A., Willems, G.M., Kop, J.M., Jansen, M.P., Hermens, W.T., 1987. Kinetics of protein sorption on phospholipid membranes measured by ellipsometry. In: Proteins at Interfaces. Physicochemical and Biomedical Studies. Brash. J.L., Horbett, T.A., (Eds.), American Chemical Society, Washington DC, pp. 208-211.
7. Di Cera E. Stochastic linkage: effect of random fluctuations on a two-state process. J. Chem. Phys. 63:1991;594-598.
8. Dewey T.G., Bann J.G. Diffusion-controlled reactions in polymer melts. Biophys. J. 63:1992;594-598.
9. Eddowes E. Direct immunochemical sensing. Basic chemical principles and fundamental limitations. Biosensors. 3:1997;1-15.
10. Eddowes E. Direct immunochemical sensing. Basic chemical principles and fundamental limitations. Biosensors. 3:1998;1-15.
11. Giaver I. Visual detection of carcinoembryonic antigen on surfaces. Immunology. 116:1976;766-771.
12. Havlin, S., 1989. Molecular diffusion and reaction. In: The fractal approach to heterogeneous chemistry: Surfaces, Colloids, Polymers. Avnir, D., (Ed.), J. Wiley & Sons, New York, pp. 251-269.
13. Ikariyama Y., Nishiguchi S., Koyama T., Kobatake E., Aizawa M., Tsuda M. Fiber-optic based biomonitoring of benzene derivatives by recombinant E. coli bearing luciferase gene-fused TOL-plasmid immobilized on the fiber-optic end. Anal. Chem. 69:1997;2600-2605.
14. Ingersoll C.M., Bright F.V. Using fluorescence to probe biosensor interfacial dynamics. Anal. Chem. 69:1997;403A-408A.
15. cam gene cloning and expression in Pseudomonas putida and Escherichia coli. Biochem. Biophys. Res. Commun. 130:1985;412-417.
16. Kopelman R. Fractal reaction kinetics. Science. 241:1988;1620-1626.
17. Lee C.K., Lee S.L. Multifractal scaling analysis of reactions over fractal surfaces. Surf. Sci. 325:1995;294-310.
18. Lee C.K., Lee S.L. Heterogeneity of surfaces and materials as reflected in multifractal analysis. Heterogeneous Chem. Rev. 3:1996;269-302.
19. Li H., Chen S., Zhao H. Fractal mechanisms for the allosteric effects of proteins and enzymes. Biophys. J. 58:1990;1313-1320.
20. Liebovitch L.S., Sullivan J.M. Fractal reaction kinetics of a voltage-dependent potassium channel from cultured mouse hippocampal neurons. Biophys. J. 52:1987;979-988.
21. Liebovitch L.S., Fischbarg J., Koniarek J.P., Todorova I., Wang M. Fractal model of ion-channel kinetics. Math. Biosci. 84:1987;37-68.
22. Mauro J.M., Cao L.K., Kondracki L.M., Walz S.E., Campbell J.R. Fiber-optic fluorometric sensing of polymerase chain reaction-amplified DNA using an immobilized DNA capture protein. Anal. Biochem. 235:1996;61-72.
23. Milum J., Sadana A. Influence of different parameters on a dual-fractal analysis for antigen-antibody binding kinetics. J. Colloid Interface Sci. 187:1997;128-138.
24. Nygren H., Stenberg M. Kinetics of antibody-binding to surface-immobilized antigen: influence of mass transport on the enzyme-linked immunosorbent assay (ELISA). J. Colloid Interface Sci. 107:1985;560-566.
25. Paddle B.M. Biosensors for chemical and biological agents of defence interest. Biosens. Bioelectron. 11:1996;1079-1113.
26. Pajkossy T., Nyikos L. Diffusion to fractal surfaces. II. Verification of theory. Electrochim. Acta. 34(2):1989;171-179.
27. Peteu S. Biosensors - an introduction (book review). Biosens. Bioelectron. 12(1):1997;xxxi-xxxii.
28. Pfeiffer, P., Obert, M. 1989. Fractals: basic concepts and terminology. In Avnir, D. (Ed.), The Fractal Approach To Hetreogeneous Chemistry: Surfaces, Colloids, Polymers. J. Wiley and Sons, New York, pp. 11-43.
29. Pisarchick M.L., Gesty D., Thompson N.L. Binding kinetics of an anti-dinitrophenyl monoclonal Fab on supported phospholipid monolayers measured by total internal reflection with fluorescence photobleaching recovery. Biophys. J. 63:1992;215-223.
30. Place, J.F., Sutherland, R.M., Riley, A., Mangan, C. 1991. Immunoassay kinetics at continuous surfaces. In D. Wise & L.B. Wingard Jr. (Eds), Biosensors With Fiberoptics (pp. 253-291). New York: Humana Press.
31. Sadana A. Binding kinetics for biosensor applications utilizing fractals: a categorization. J. Colloid Interface Sci. 190:1997;232-240.
32. Sadana A., Beelaram A. Antigen-antibody diffusion-limited binding kinetics of biosensors. A fractal analysis. Biosens. & Bioelectron. 10:1994;301-316.
33. Sadana A., Beelaram A. Antigen-antibody diffusion-limited binding kinetics of biosensors: a fractal analysis. Biosens. Bioelectron. 10:1995;1567-1574.
34. Sadana A., Madagula A. Binding kinetics of antigen by immobilized antibody or of antibody by immobilized antigen: influence of lateral interactions and variable rate coefficients. Biotechnol. Progr. 9:1993;259-266.
35. Sadana A., Madagula A. A fractal analysis of external diffusion limited first-order kinetics for the binding of antigen by immobilized antibody. Biosens. Bioelectron. 9:1994;45-55.
36. Sadana A., Sii D. Binding kinetics of antigen by immobilized antibody: influence of a variable rate coefficient on external diffusion limited kinetics. J. Colloid Interface Sci. 151(1):1992;166-177.
37. Sadana A., Sii D. Binding kinetics of antigen by immobilized antibody: influence of reaction order and external diffusional limitations. Biosens. Bioelectron. 7:1992;559-568.
38. Sadana A., Sutaria M. Influence of diffusion to fractal surfaces on the binding kinetics for antibody-antigen, analyte-receptor, and analyte-receptorless (protein) systems. Biophys. Chem. 65:1997;29-44.
39. Sadana A., Sutaria M. A dual-fractal analysis for antigen-antibody binding kinetics for biosensor applications. Biotechnol. Progr. 13:1997;464-473.
40. Sadana, A., Vo-Dinh, T., 1997. Protein folding and misfolding. Biomedical implications. Biocatalysis and Biotransformation. submitted.
41. Scheller F.W., Hintsche R., Pfeifer D., Schubert D., Reidel K., Kindevater R. Biosensors: fundamentals, applications and trends. Sens. Actuators. 4:1991;197-206.
42. Sigmaplot 1993. Scientific Graphing Software, User's Manual. San Rafael, CA: Jandel Scientific.
43. Sorenson C.M., Roberts G.C. The prefactor of fractal aggregates. J. Colloid Interface Sci. 186:1997;447-452.
44. Stenberg M., Nygren H.A. A receptor-ligand reaction studied by a novel analytical tool - the isoscope ellipsometer. Anal. Biochem. 127:1982;183-192.
45. Stenberg M., Stiblert L., Nygren H.A. External diffusion in solid-phase immunoassay. J. Theor. Biol. 120:1986;129-142.
46. Vo-Dinh T., Griffin G.D., Ambrose K.R. A portable fiberoptic monitor for fluorimetric bioassays. Appl. Spectrosc. 40(5):1986;696-703.
47. Vo-Dinh T., Tromberg B.J., Griffin G.D., Ambrose K.R., Sepaniak M.J., Gardenhire E.M. Antibody-based fiberoptics biosensor for the carcinogen benzo(a)pyrene. Appl. Spectrosc. 54(5):1987;735-741.
48. Vo-Dinh T., Nolan T., Cheng Y.F., Sepaniak M.J., Alarie J.P. Phase-resolved fiber-optics fluoroimmunosensor. Appl. Spectrosc. 44(1):1990;128-136.
49. West G.B., Brown J.H., Enquist B.J. A general model for the origin of allometric scaling laws in biology. Science. 276:1997;122-126.
50. Yen K.M., Gunsalus I.C. Plasmid-gene organization. Naphthalene/salicylate oxidation. Proc. Natl. Acad. Sci. 79:1982;874-878.