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Volumn 8, Issue 3, 1998, Pages 309-313

DNA-DNA interactions

Author keywords

[No Author keywords available]

Indexed keywords

DNA;

EID: 0032104520     PISSN: 0959440X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0959-440X(98)80063-8     Document Type: Article
Times cited : (140)

References (52)
  • 2
    • 0030947539 scopus 로고    scopus 로고
    • Ionic effects on the elasticity of single DNA molecules
    • of outstanding interest. The authors describe how pulling on a single DNA molecule reveals that the apparent DNA persistence length changes with ionic strength and salt valency.
    • Baumann CG, Smith SB, Bloomfield VA, Bustamante C. Ionic effects on the elasticity of single DNA molecules. of outstanding interest Proc Natl Acad Sci USA. 94:1997;6185-6190 The authors describe how pulling on a single DNA molecule reveals that the apparent DNA persistence length changes with ionic strength and salt valency.
    • (1997) Proc Natl Acad Sci USA , vol.94 , pp. 6185-6190
    • Baumann, C.G.1    Smith, S.B.2    Bloomfield, V.A.3    Bustamante, C.4
  • 3
    • 0003803285 scopus 로고    scopus 로고
    • of outstanding interest. V.A. Bloomfield, D.M. Crothers, Tinoco I. University Science Books Mill Valley The long awaited second edition of a widely respected text
    • of outstanding interest Bloomfield VA, Crothers DM, Tinoco I. Nucleic Acids: Structures, Properties, and Functions. 1998;University Science Books, Mill Valley, The long awaited second edition of a widely respected text.
    • (1998) Nucleic Acids: Structures, Properties, and Functions
  • 4
    • 0029157054 scopus 로고
    • Hydration and solution structure of nucleic acids
    • Kochoyan M, Leroy JL. Hydration and solution structure of nucleic acids. Curr Opin Struct Biol. 5:1995;33-329.
    • (1995) Curr Opin Struct Biol , vol.5 , pp. 33-329
    • Kochoyan, M.1    Leroy, J.L.2
  • 5
    • 0030395810 scopus 로고    scopus 로고
    • Condensed phases of DNA: Structures and phase transitions
    • Livolant F, Leforestier A. Condensed phases of DNA: Structures and phase transitions. Prog Polym Sci. 21:1996;1115-1164.
    • (1996) Prog Polym Sci , vol.21 , pp. 1115-1164
    • Livolant, F.1    Leforestier, A.2
  • 7
    • 0028802258 scopus 로고
    • Watching molecules crowd: DNA double helices under osmotic stress
    • Bodgornik R, Strey HH, Rau DC, Parsegian VA. Watching molecules crowd: DNA double helices under osmotic stress. Biophys Chem. 57:1995;111-121.
    • (1995) Biophys Chem , vol.57 , pp. 111-121
    • Bodgornik, R.1    Strey, H.H.2    Rau, D.C.3    Parsegian, V.A.4
  • 9
    • 0029975925 scopus 로고    scopus 로고
    • DNA aggregation induced by polyamines and cobalthexamine
    • Pelta J, Livolant F, Sikorav J-L. DNA aggregation induced by polyamines and cobalthexamine. J Biol Chem. 271:1996;5656-5662.
    • (1996) J Biol Chem , vol.271 , pp. 5656-5662
    • Pelta, J.1    Livolant, F.2    Sikorav J-L3
  • 10
    • 0029136052 scopus 로고
    • DNA Complexes with polycations for the delivery of genetic material into cells
    • Kabanov AV, Kabanov VA. DNA Complexes with polycations for the delivery of genetic material into cells. Bioconjug Chem. 6:1995;7-20.
    • (1995) Bioconjug Chem , vol.6 , pp. 7-20
    • Kabanov, A.V.1    Kabanov, V.A.2
  • 11
    • 0010456777 scopus 로고    scopus 로고
    • Supramolecular liquid crystallinity: Spherical coils of levan surrounding cylindrical rods of DNA
    • Huber AE, Viney C. Supramolecular liquid crystallinity: spherical coils of levan surrounding cylindrical rods of DNA. Phys Rev Lett. 80:1997;623-626.
    • (1997) Phys Rev Lett , vol.80 , pp. 623-626
    • Huber, A.E.1    Viney, C.2
  • 12
    • 0029933808 scopus 로고    scopus 로고
    • DNA mesophases induced by spermidine: Structural properties and biological implications
    • Pelta J, Durand D, Doucet J, Livolant F. DNA mesophases induced by spermidine: structural properties and biological implications. Biophys J. 71:1996;48-63.
    • (1996) Biophys J , vol.71 , pp. 48-63
    • Pelta, J.1    Durand, D.2    Doucet, J.3    Livolant, F.4
  • 13
    • 0026558204 scopus 로고
    • Direct measurement of the intermolecular forces between counterion-condensed DNA double helices: Evidence for long range attractive hydration forces
    • Rau DC, Parsegian VA. Direct measurement of the intermolecular forces between counterion-condensed DNA double helices: evidence for long range attractive hydration forces. Biophys J. 61:1992;246-259.
    • (1992) Biophys J , vol.61 , pp. 246-259
    • Rau, D.C.1    Parsegian, V.A.2
  • 14
    • 0000198963 scopus 로고
    • Measured entropy and enthalpy of hydration of a function of distance between DNA double helices
    • Leikin S, Rau DC, Parsegian VA. Measured entropy and enthalpy of hydration of a function of distance between DNA double helices. Phys Rev A. 44:1991;5272-5278.
    • (1991) Phys Rev a , vol.44 , pp. 5272-5278
    • Leikin, S.1    Rau, D.C.2    Parsegian, V.A.3
  • 15
    • 0030867141 scopus 로고    scopus 로고
    • DNA length and concentration dependencies of anisotropic phase transitions of DNA solutions
    • of outstanding interest. This study addresses the important polymer liquid crystal question as to how the isotropic to anisotropic transition concentration depends upon DNA length.
    • Merchant K, Rill RL. DNA length and concentration dependencies of anisotropic phase transitions of DNA solutions. of outstanding interest Biophys J. 73:1997;3154-3163 This study addresses the important polymer liquid crystal question as to how the isotropic to anisotropic transition concentration depends upon DNA length.
    • (1997) Biophys J , vol.73 , pp. 3154-3163
    • Merchant, K.1    Rill, R.L.2
  • 16
    • 0030669286 scopus 로고    scopus 로고
    • Encapsidated conformation of bacteriophage T7 DNA
    • of outstanding interest. This paper gives remarkably detailed electron microscopic pictures of DNA inside its virus capsid.
    • Cerriteli ME, Cheng N, Rosenberg AH, McPherson CE, Booy FP, Steven AC. Encapsidated conformation of bacteriophage T7 DNA. of outstanding interest Cell. 91:1997;271-280 This paper gives remarkably detailed electron microscopic pictures of DNA inside its virus capsid.
    • (1997) Cell , vol.91 , pp. 271-280
    • Cerriteli, M.E.1    Cheng, N.2    Rosenberg, A.H.3    McPherson, C.E.4    Booy, F.P.5    Steven, A.C.6
  • 17
    • 0028207587 scopus 로고
    • Parametrization of direct and soft steric-undulatory forces between DNA double helical polyelectrolytes in solutions of several different anions and cations
    • Podgornik R, Rau DC, Parsegian VA. Parametrization of direct and soft steric-undulatory forces between DNA double helical polyelectrolytes in solutions of several different anions and cations. Biophys J. 66:1994;962-971.
    • (1994) Biophys J , vol.66 , pp. 962-971
    • Podgornik, R.1    Rau, D.C.2    Parsegian, V.A.3
  • 18
    • 0001533502 scopus 로고
    • Measurement of the repulsive force between polyelectrolyte molecules in ionic solution: Hydration forces between parallel DNA double helices
    • Rau DC, Lee BK, Parsegian VA. Measurement of the repulsive force between polyelectrolyte molecules in ionic solution: hydration forces between parallel DNA double helices. Proc Natl Acad Sci USA. 81:1984;2621-2625.
    • (1984) Proc Natl Acad Sci USA , vol.81 , pp. 2621-2625
    • Rau, D.C.1    Lee, B.K.2    Parsegian, V.A.3
  • 19
    • 0001044588 scopus 로고    scopus 로고
    • Equation of state for DNA liquid crystals: Fluctuation enhanced electrostatic repulsion
    • of outstanding interest. This paper reveals that bending fluctuations enhance the Debye screening length as well as the range of electrostatic repulsion between DNA molecules.
    • Strey HH, Parsegian VA, Podgornik R. Equation of state for DNA liquid crystals: fluctuation enhanced electrostatic repulsion. of outstanding interest Phys Rev Lett. 78:1997;895-898 This paper reveals that bending fluctuations enhance the Debye screening length as well as the range of electrostatic repulsion between DNA molecules.
    • (1997) Phys Rev Lett , vol.78 , pp. 895-898
    • Strey, H.H.1    Parsegian, V.A.2    Podgornik, R.3
  • 20
    • 0028926169 scopus 로고
    • In vivo quantitative characterization of intermolecular interactions
    • Reich Z, Wachtel EJ, Minsky A. In vivo quantitative characterization of intermolecular interactions. J Biol Chem. 270:1995;7045-7046.
    • (1995) J Biol Chem , vol.270 , pp. 7045-7046
    • Reich, Z.1    Wachtel, E.J.2    Minsky, A.3
  • 21
    • 0029932260 scopus 로고    scopus 로고
    • Flow of structural information between four DNA conformational levels
    • Levin-Zaidman S, Reich Z, Wachtel EJ, Minsky A. Flow of structural information between four DNA conformational levels. Biochemistry. 35:1996;2985-2991.
    • (1996) Biochemistry , vol.35 , pp. 2985-2991
    • Levin-Zaidman, S.1    Reich, Z.2    Wachtel, E.J.3    Minsky, A.4
  • 23
    • 33645091351 scopus 로고
    • Monte Carlo simulation study of ion distribution and osmotic pressure in hexagonally oriented DNA
    • Lyubartsev AP, Nordenskiöld L. Monte Carlo simulation study of ion distribution and osmotic pressure in hexagonally oriented DNA. J Phys Chem. 99:1995;10373-10382.
    • (1995) J Phys Chem , vol.99 , pp. 10373-10382
    • Lyubartsev, A.P.1    Nordenskiöld, L.2
  • 24
    • 0026608715 scopus 로고
    • Direct measurement of temperature-dependent solvation forces between DNA double helices
    • Rau DC, Parsegian VA. Direct measurement of temperature-dependent solvation forces between DNA double helices. Biophys J. 61:1992;260-271.
    • (1992) Biophys J , vol.61 , pp. 260-271
    • Rau, D.C.1    Parsegian, V.A.2
  • 25
    • 0001091904 scopus 로고    scopus 로고
    • Ion-ion correlations and effective charges in electrolyte and macroion systems
    • Kjellander R. Ion-ion correlations and effective charges in electrolyte and macroion systems. Ber Bunsen Ges Phys Chem Phys. 100:1996;894-904.
    • (1996) Ber Bunsen Ges Phys Chem Phys , vol.100 , pp. 894-904
    • Kjellander, R.1
  • 26
    • 0030572245 scopus 로고    scopus 로고
    • Macro-ion attraction due to electrostatic correlation between screening counterions. 1. Mobile surface-adsorbed ions and diffues ion cloud
    • Rouzina I, Bloomfield VA. Macro-ion attraction due to electrostatic correlation between screening counterions. 1. Mobile surface-adsorbed ions and diffues ion cloud. J Phys Chem. 100:1996;9977-9989.
    • (1996) J Phys Chem , vol.100 , pp. 9977-9989
    • Rouzina, I.1    Bloomfield, V.A.2
  • 28
    • 0031095657 scopus 로고    scopus 로고
    • Counterion-induced attraction between rigid polyelectrolytes
    • of special interest. A reconsideration of the counterion fluctuation forces between cylindrical molecules. A connection is made between the ordering of counterions and the onset of attraction.
    • Gronbech-Jensen N, Mashi RJ, Bruinsma RF, Gelbart WM. Counterion-induced attraction between rigid polyelectrolytes. of special interest Phys Rev Lett. 78:1997;2477 A reconsideration of the counterion fluctuation forces between cylindrical molecules. A connection is made between the ordering of counterions and the onset of attraction.
    • (1997) Phys Rev Lett , vol.78 , pp. 2477
    • Gronbech-Jensen, N.1    Mashi, R.J.2    Bruinsma, R.F.3    Gelbart, W.M.4
  • 29
    • 0012530305 scopus 로고
    • Theory of polyelectrolyte solutions
    • New York: John Wiley & Sons
    • Barrat J-L, Joanny J-F. Theory of polyelectrolyte solutions. Advances in Chemical Physics. 1995;1-66 John Wiley & Sons, New York.
    • (1995) Advances in Chemical Physics , pp. 1-66
    • Barrat J-L1    Joanny J-F2
  • 30
    • 0000888701 scopus 로고    scopus 로고
    • Counterion-mediated attraction between two like-charged rods
    • of special interest. The authors show that counterion fluctuation forces appear to persist even if the counterions along the cylindrical molecules are completely disordered.
    • Ha BJ, Liu AJ. Counterion-mediated attraction between two like-charged rods. of special interest Phys Rev Lett. 79:1997;1289-1292 The authors show that counterion fluctuation forces appear to persist even if the counterions along the cylindrical molecules are completely disordered.
    • (1997) Phys Rev Lett , vol.79 , pp. 1289-1292
    • Ha, B.J.1    Liu, A.J.2
  • 31
    • 0000355348 scopus 로고    scopus 로고
    • Charge fluctuation forces between stiff polyelectrolytes in salt solutions: Pairwise summability reexamined
    • of special interest. A paper with a strong caveat regarding the nonpairwise additivity of correlation attractions in arrays of cylindrical molecules, since counterion fluctuations are not localized to individual chains.
    • Podgornik R, Parsegian VA. Charge fluctuation forces between stiff polyelectrolytes in salt solutions: pairwise summability reexamined. of special interest Phys Rev Lett. 80:1997;1560-1563 A paper with a strong caveat regarding the nonpairwise additivity of correlation attractions in arrays of cylindrical molecules, since counterion fluctuations are not localized to individual chains.
    • (1997) Phys Rev Lett , vol.80 , pp. 1560-1563
    • Podgornik, R.1    Parsegian, V.A.2
  • 32
    • 0031236968 scopus 로고    scopus 로고
    • Effect of counterion valence and polymer charge density on the pair potential of two polyions
    • Ray J, Manning GS. Effect of counterion valence and polymer charge density on the pair potential of two polyions. Macromolecules. 30:1997;5739-5744.
    • (1997) Macromolecules , vol.30 , pp. 5739-5744
    • Ray, J.1    Manning, G.S.2
  • 33
    • 0001225024 scopus 로고    scopus 로고
    • Long-range electrostatic attraction between macroions mediated by oppositely charged counterions: Experimental supports, past and present
    • Ise N. Long-range electrostatic attraction between macroions mediated by oppositely charged counterions: experimental supports, past and present. Ber Bunseng Ges Phys Chem Phys. 100:1996;841-848.
    • (1996) Ber Bunseng Ges Phys Chem Phys , vol.100 , pp. 841-848
    • Ise, N.1
  • 34
    • 0029099524 scopus 로고
    • Evaluation of the counterion condensation theory of polyelectrolytes
    • Stigter D. Evaluation of the counterion condensation theory of polyelectrolytes. Biophys J. 69:1995;380-388.
    • (1995) Biophys J , vol.69 , pp. 380-388
    • Stigter, D.1
  • 35
    • 0029947738 scopus 로고    scopus 로고
    • Gel and free solution electrophoresis of variably charged polymers
    • Hoagland DA, Smisek DL, Chen DY. Gel and free solution electrophoresis of variably charged polymers. Electrophoresis. 17:1996;1151-1160.
    • (1996) Electrophoresis , vol.17 , pp. 1151-1160
    • Hoagland, D.A.1    Smisek, D.L.2    Chen, D.Y.3
  • 36
    • 84984083478 scopus 로고
    • Electrophoresis of DNA. III. The effect of several univalent electrolytes on the mobility of DNA
    • Ross PD, Scruggs RL. Electrophoresis of DNA. III. The effect of several univalent electrolytes on the mobility of DNA. Biopolymers. 2:1964;231-236.
    • (1964) Biopolymers , vol.2 , pp. 231-236
    • Ross, P.D.1    Scruggs, R.L.2
  • 39
    • 0017380736 scopus 로고
    • Electrical double layer, zeta potential, and electrophoretic charges of double-stranded DNA
    • Schellman JA, Stigter D. Electrical double layer, zeta potential, and electrophoretic charges of double-stranded DNA. Biopolymers. 16:1977;1415-1434.
    • (1977) Biopolymers , vol.16 , pp. 1415-1434
    • Schellman, J.A.1    Stigter, D.2
  • 40
    • 0000565827 scopus 로고
    • Multimolecular aggregation in concentrated isotropic solutions of mononucleosomal DNA in 1M sodium cloride
    • Wissenburg P, Odijk T, Cirkel P, Mandel M. Multimolecular aggregation in concentrated isotropic solutions of mononucleosomal DNA in 1M sodium cloride. Macromolecules. 27:1994;306-308.
    • (1994) Macromolecules , vol.27 , pp. 306-308
    • Wissenburg, P.1    Odijk, T.2    Cirkel, P.3    Mandel, M.4
  • 41
    • 0000510463 scopus 로고
    • Multimolecular aggregation of mononucleosomal DNA in concentrated isotropic solutions
    • Wissenburg P, Odijk T, Cirkel P, Mandel M. Multimolecular aggregation of mononucleosomal DNA in concentrated isotropic solutions. Macromolecules. 28:1995;2315-2328.
    • (1995) Macromolecules , vol.28 , pp. 2315-2328
    • Wissenburg, P.1    Odijk, T.2    Cirkel, P.3    Mandel, M.4
  • 42
    • 0028049305 scopus 로고
    • The twist, writhe and overall shape of supercoiled DNA change during counterion-induced transition from loosley to a tightly interwound superhelix
    • Bednar J, Furrer P, Stasiak A, Doubochet J, Egelman EH, Bates AD. The twist, writhe and overall shape of supercoiled DNA change during counterion-induced transition from loosley to a tightly interwound superhelix. J Mol Biol. 235:1994;825-847.
    • (1994) J Mol Biol , vol.235 , pp. 825-847
    • Bednar, J.1    Furrer, P.2    Stasiak, A.3    Doubochet, J.4    Egelman, E.H.5    Bates, A.D.6
  • 44
    • 0026243435 scopus 로고
    • Small-angle X-ray scattering of semidilute rodlike DNA solutions: Polyelectrolyte behavior
    • Wang L, Bloomfield VA. Small-angle X-ray scattering of semidilute rodlike DNA solutions: polyelectrolyte behavior. Macromolecules. 24:1991;5791-5795.
    • (1991) Macromolecules , vol.24 , pp. 5791-5795
    • Wang, L.1    Bloomfield, V.A.2
  • 45
    • 0001621293 scopus 로고
    • Concentration and molecular weight regime diagram of salt-free polyelectrolyte solutions as studied by light scattering
    • Sedlak M, Amis EJ. Concentration and molecular weight regime diagram of salt-free polyelectrolyte solutions as studied by light scattering. J Chem Phys. 96:1992;826-834.
    • (1992) J Chem Phys , vol.96 , pp. 826-834
    • Sedlak, M.1    Amis, E.J.2
  • 46
    • 0001258148 scopus 로고    scopus 로고
    • Theory of interaction between helical molecules
    • of outstanding interest. This is probably the most significant formulary advance in over a decade on the interactions of helical molecules.
    • Kornyshev AA, Leikin S. Theory of interaction between helical molecules. of outstanding interest J Chem Phys. 107:1997;3656-3674 This is probably the most significant formulary advance in over a decade on the interactions of helical molecules.
    • (1997) J Chem Phys , vol.107 , pp. 3656-3674
    • Kornyshev, A.A.1    Leikin, S.2
  • 47
    • 0018976521 scopus 로고
    • Helical periodicity of DNA determined by enzyme digestion
    • Rhodes D, Klug A. Helical periodicity of DNA determined by enzyme digestion. Nature. 286:1980;573-578.
    • (1980) Nature , vol.286 , pp. 573-578
    • Rhodes, D.1    Klug, A.2
  • 48
    • 0029942364 scopus 로고    scopus 로고
    • The structure of B-DNA in oriented fibers
    • Chandrasekaran R, Arnott S. The structure of B-DNA in oriented fibers. J Biomol Struct Dyn. 13:1996;1015-1027.
    • (1996) J Biomol Struct Dyn , vol.13 , pp. 1015-1027
    • Chandrasekaran, R.1    Arnott, S.2
  • 49
    • 0029882780 scopus 로고    scopus 로고
    • Measurement of intercolumnar forces between parallel guanosine four-stranded helices
    • Mariani P, Saturni L. Measurement of intercolumnar forces between parallel guanosine four-stranded helices. Biophys J. 70:1996;2867-2874.
    • (1996) Biophys J , vol.70 , pp. 2867-2874
    • Mariani, P.1    Saturni, L.2
  • 50
    • 0031972920 scopus 로고    scopus 로고
    • Helix-specific interactions induce condensation of guanosine four-stranded helices in concentrated salt solutions
    • of outstanding interest. The authors describe force measurements on discotic liquid crystals of guanosine quartets. The paper is interesting also for the structure of telomeric sequences.
    • Mariani P, Ciuchi F, Saturni L. Helix-specific interactions induce condensation of guanosine four-stranded helices in concentrated salt solutions. of outstanding interest Biophys J. 74:1998;430-435 The authors describe force measurements on discotic liquid crystals of guanosine quartets. The paper is interesting also for the structure of telomeric sequences.
    • (1998) Biophys J , vol.74 , pp. 430-435
    • Mariani, P.1    Ciuchi, F.2    Saturni, L.3
  • 51
    • 0028967611 scopus 로고
    • Temperature-favoured assembly of collagen is driven by hydrophilic not hydrophobic interactions
    • Leikin S, Rau DC, Parsegian VA. Temperature-favoured assembly of collagen is driven by hydrophilic not hydrophobic interactions. Nat Struct Biol. 2:1995;205-210.
    • (1995) Nat Struct Biol , vol.2 , pp. 205-210
    • Leikin, S.1    Rau, D.C.2    Parsegian, V.A.3
  • 52
    • 0000613366 scopus 로고    scopus 로고
    • On the macroscopic origin of cholesteric pitch
    • of special interest. Theoretical observations on why chiral interactions in liquid crystals are typically much smaller than expected.
    • Harris AB, Kamien RD, Lubensky TC. On the macroscopic origin of cholesteric pitch. of special interest Phys Rev Lett. 78:1997;1476-1479 Theoretical observations on why chiral interactions in liquid crystals are typically much smaller than expected.
    • (1997) Phys Rev Lett , vol.78 , pp. 1476-1479
    • Harris, A.B.1    Kamien, R.D.2    Lubensky, T.C.3


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