Construction of a rat genetic map by using randomly amplified microsatellite polymorphism (RAMP) markers

Mammalian Genome

Volumn 9, Issue 7, 1998, Pages 531-535

  Matsumoto, Chiho ^a,b   Nabika, Toru ^a   Mashimo, Tomoji ^b   Kato, Norihiro ^b   Yamori, Yukio ^b   Masuda, Junichi ^a  

^a SHIMANE UNIVERSITY   (Japan)

^b KYOTO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; CHROMOSOME MAP; GENE MAPPING; GENETIC MARKER; GENOME; NONHUMAN; RANDOM AMPLIFIED POLYMORPHIC DNA; RAT; SPONTANEOUSLY HYPERTENSIVE RAT;

ANIMALS; BASE SEQUENCE; CHROMOSOME MAPPING; CLONING, MOLECULAR; DNA; MICROSATELLITE REPEATS; MOLECULAR SEQUENCE DATA; POLYMORPHISM, GENETIC; QUANTITATIVE TRAIT, HERITABLE; RATS;

EID: 0031901901     PISSN: 09388990     EISSN: None     Source Type: Journal    
DOI: 10.1007/s003359900813     Document Type: Article

References (30)

1. 2 crosses. Genome Res 7, 434-440
2. Brown DM, Provoost AP, Daly MJ, Lander ES, Jacob HJ (1996) Renal disease susceptibility and hypertension are under independent genetic control in the fawn-hooded rat. Nat Genet 12, 44-51
3. Dib C, Faure S, Fizames C, Samson D, Drouot N et al. (1996) A comprehensive genetic map of the human genome based on 5,264 microsatellites. Nature 380, 152-154
4. Dietrich WF, Miller J, Steen R, Merchant MA, Damron-Boles D et al. (1996) A comprehensive genetic map of the mouse genome. Nature 380, 149-152
5. Galli J, Li L-S, Glaser A, Ostenson C-G, Jiao H et al. (1996) Genetic analysis of non-insulin dependent diabetes mellitus in the GK rat. Nat Genet 12, 31-37
6. Gauguier D, Froguel P, Parent V, Bernard C, Bihoreau M-T et al. (1996) Chromosomal mapping of genetic loci associated with non-insulin dependent diabetes in the GK rat. Nat Genet 12, 38-43
7. Gu L, Dene H, Deng AY, Hoebee B, Bihoreau M-T et al. (1996) Genetic mapping of two blood pressure quantitative trait loci on rat chromosome 1. J Clin Invest 97, 777-788
8. Hamada H, Kakunaga T (1982) Potential Z-DNA forming sequences are highly dispersed in the human genome. Nature 298, 396-398
9. Hatada I, Hayashizaki Y, Hirotsune S, Komatsubara K, Mukai T (1991) A genomic scanning method for higher organisms using restriction sites as landmarks on the genome. Proc Natl Acad Sci USA 88, 9523-9527
10. Hayashizaki Y, Hirotsune S, Okazaki Y, Shibata H, Akasako A et al. (1994) A genetic linkage map of the mouse using restriction landmark genomic scanning (RLGS). Genetics 138, 1207-1238
11. Hilbert P, Lindpaintner K, Beckmann JS, Serikawa T, Soubrier F et al. (1991) Chromosomal mapping of two genetic loci associated with blood-pressure regulation in hereditary hypertensive rats. Nature 353, 521-529
12. Ikeda K, Nara Y, Matsumoto C, Mashimo T, Tamada T et al. (1996) The region responsible for stroke on chromosome 4 in the stroke-prone spontaneously hypertensive rat. Biochem Biophys Res Commun 29, 658-662
13. Jacob HJ (1996) A landmark for orphan genomes? Nat Genet 13, 14-15
14. Jacob HJ, Lindpaintner K, Lincoln SE, Kusumi K, Bunker RK et al. (1991) Genetic mapping of a gene causing hypertension in the stroke-prone spontaneously hypertensive rat. Cell 67, 213-224
15. Jacob HJ, Brown DM, Bunker RK, Daly MJ, Dzau VJ et al. (1995) A genetic linkage map of the laboratory rat. Rattus norvegicus. Nat Genet 9, 63-69
16. Jeffs B, Clark JS, Anderson NH, Gratton J, Brosnan MJ et al. (1997) Sensitivity to cerebral ischaemic insult in a rat model of stroke is determined by a single genetic locus. Nature Genet 16, 364-367
17. Lander ES, Green P, Abrahamson J, Barlow A, Daly MJ et al. (1987) Mapmaker: an interactive computer package for constructing primary genetic linkage maps of experimental and natural populations. Genomics 1, 174-181
18. Matsumoto C, Nara Y, Ikeda K, Tamada T, Mashimo T et al. (1996) Cosegregation of the new region on chromosome 3 with salt-induced hypertension in female F2 progeny from stroke-prone spontaneously hypertensive and Wistar-Kyoto rats. Clin Exp Pharmacol Physiol 23, 1028-1034
19. Moisan M-P, Courvoisier H, Bihoreau M-T, Gauguier D, Hendley ED et al. (1996) A major quantitative trait locus influences hyperactivity in the WKHA rat. Nat Genet 14, 471-473
20. Nabika T, Ito T, Kitada K, Serikawa T, Mashimo T et al. (1997) Comparative mapping of novel simple sequence repeat markers in a hypertension-related region on rat chromosome 1. Mamm Genome 8, 215-217
21. Nara Y, Nabika T, Ikeda K, Sawamura M, Mano M et al. (1993) Basal high blood pressure cosegregates with the loci on chromosome 1 in the F2 generation from crosses between normotensive Wistar Kyoto rats and stroke-prone spontaneously hypertensive rats. Biochem Biophys Res Commun 94, 1344-1351
22. Otsen M, den Bieman M, Kuiper MTR, Pravenec M, Kren V et al. (1996) Use of AFLP markers for gene mapping and QTL detection in the rat. Genomics 37, 289-294
23. Rapp JP, Dene H, Deng AY (1994) Seven renin alleles in rats and their effect on blood pressure. J Hypertens 12, 349-355
24. Rubattu S, Volpe M, Kreutz R, Ganten U, Ganten D et al. (1996) Chromosomal mapping of quantitative trait loci contributing to stroke in a rat model of complex human disease. Nat Genet 13, 429-434
25. Schork NJ, Nath SP, Lindpaintner K, Jacob HJ (1996) Extensions to quantitative trait locus mapping in experimental organisms. Hypertension 28, 1104-1111
26. Serikawa T, Kuramoto T, Hilbert P, Mon M, Yamada J et al. (1992) Rat gene mapping using PCR-analyzed microsatellites. Genetics 131, 701-721
27. Vos P, Hogers R, Bleeker M, Reijans M, van de Lee T et al. (1995) AFLP: a new technique for DNA fingerprinting. Nucleic Acids Res 21, 4407-4414
28. Welsh J, McClelland M (1990) Fingerprinting genomes using PCR with arbitrary primers. Nucleic Acids Res 18, 7213-7218
29. Williams JGK, Kubelik AR, Livak KJ, Rafalski JA, Tingey SV (1990) DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res 18, 6531-6535
30. Wu K-S, Jones R, Danneberger L, Scolnik PA (1994) Detection of microsatellite polymorphisms without cloning. Nucleic Acids Res 22, 3257-3258