Preferential completion of human immunodeficiency virus type 1 proviruses initiated with tRNA3/(Lys) rather than tRNA1,2/(Lys)

Journal of Virology

Volumn 72, Issue 7, 1998, Pages 5464-5471

  Zhang, Zhijun ^a   Yu, Qin ^a   Kang, Sang Moo ^a   Buescher, James ^a   Morrow, Casey D ^a  

^a University of Alabama at Birmingham   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSFER RNA; VIRUS DNA; VIRUS RNA;

ARTICLE; BINDING SITE; DNA SEQUENCE; GENETIC TRANSFECTION; HUMAN IMMUNODEFICIENCY VIRUS 1; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROVIRUS; REVERSE TRANSCRIPTION; VIRUS REPLICATION;

EID: 0031779692     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/jvi.72.7.5464-5471.1998     Document Type: Article

References (30)

1. Baltimore, D. 1970. Viral RNA-dependent DNA polymerase. Nature (London) 226:1209-1211.
2. Ben-Artzi, H., J. Shemesh, E. Zeelon, B. Amit, L. Kleiman, M. Gorecki, and A. Panet. 1996. Molecular analysis of the second template switch during reverse transcription of the HIV RNA template. Biochemistry 35:10549-10557.
3. Burns, J. C., T. Friedmann, W. Driever, M. Burrascano, and J.-K. Yee. 1993. Vesicular stomatitis virus G glycoprotein pseudotyped retroviral vectors: concentration to very high titer and efficient gene transfer into mammalian and non mammalian cells. Proc. Natl. Acad. Sci. USA 90:8033-8037.
4. Colicelli, J., and S. P. Goff. 1987. Isolation of a recombinant murine leukemia virus utilizing a new primer tRNA. J. Virol. 57:37-45.
5. 3. J. Virol. 69:3090-3097.
6. Gilboa, E., S. W. Mitra, S. Goff, and D. Baltimore. 1979. A detailed model of reverse transcription and tests of crucial aspects. Cell 18:93-100.
7. Harada, F., R. Sawyer, and J. Dahlberg. 1975. A primer ribonucleic acid for initiation of in vitro Rous sarcoma virus deoxyribonucleic acid synthesis. J. Biol. Chem. 250:3487-3497.
8. Lys,3 (template/primer) complex. J. Mol. Biol. 247:236-250.
9. Jiang, M., J. Mak, A. Ladha, E. Cohen, M. Klein, B. Rovinski, and L. Kleiman. 1993. Identification of tRNAs incorporated into wild-type and mutant human immunodeficiency virus type 1. J. Virol. 67:3246-3253.
10. Kang, S.-M., J. K. Wakefield, and C. D. Morrow. 1996. Mutations in both the U5 region and primer binding site influence the selection of the tRNA used for the initiation of HIV-1 reverse transcription. Virology 222:401414.
11. Met. J. Virol. 71:207-217.
12. Lys,3 for initiation of reverse transcription. Submitted for publication.
13. Li, X., J. Mak, E. J. Arts, Z. Gu, L. Kleiman, M. A. Wainberg, and M. A. Parniak. 1994. Effects of alterations of primer-binding site sequences on human immunodeficiency virus type 1 replication. J. Virol. 68:6198-6206.
14. His. Virology 238:273-282.
15. Lund, A. H., M. Duch, J. Lovmand, P. Jørgensen, and F. S. Pedersen. 1997. Complementation of a primer binding site-impaired murine leukemia virus-derived retroviral vector by a genetically engineered tRNA-like primer. J. Virol. 71:1191-1195.
16. Lys into human immunodeficiency virus type 1 particles. J. Virol. 68: 2065-2072.
17. Page, K. A., N. R. Landau, and D. R. Littman. 1990. Construction and use of a human immunodeficiency virus vector for analysis of virus infectivity. J. Virol. 64:5270-5276.
18. Peters, G., and C. Glover. 1980. tRNAs and primer of RNA-directed DNA synthesis in mouse mammary tumor virus. J. Virol. 35:31-40.
19. Peters, G., F. Harada, J. E. Dahlberg, A. Panet, W. A. Haseltine, and D. Baltimore. 1977. Low-molecular-weight RNAs of moloney murine leukemia virus: identification of the primer for RNA-directed DNA synthesis. J. Virol. 21:1031-1041.
20. Ratner, L., A. Fisher, L. Linda, J. Agodzinski, H. Mitsuya, R.-S. Liou, R. C. Gallo, and F. Wong-Staal. 1987. Complete nucleotide sequences of functional clones of the AIDS virus. AIDS Res. Hum. Retroviruses 3:57-69.
21. Ratner, L., W. Haseltine, R. Patarca, K. J. Livak, B. Starcich, S. F. Josephs, E. R. Doran, J. A. Rafalski, E. A. Whitehorn, K. Baumeister, L. Ivanoff, J. S. R. Petteway, M. L. Pearson, J. A. Lautenberge, T. S. Papas, J. Ghrayeb, N. T. Chang, R. C. Gallo, and F. Wong-Staal. 1985. Complete nucleotide sequence of the AIDS virus, HTLV-III. Nature (London) 313:277-284.
22. Rhim, H., J. Park, and C. D. Morrow. 1991. Deletions in the tRNA primer-binding site of human immunodeficiency virus type 1 identify essential regions for reverse transcription. J. Virol. 65:4555-4564.
23. Roth, M. J., P. L. Schwartzberg, and S. P. Goff. 1989. Structure of the termini of DNA intermediates in the integration of retroviral DNA: dependence on IN function and terminal DNA sequence. Cell 58:47-54.
24. Sprintzl, M., T. Hartmann, J. Weber, J. Blank, and R. Zeidler. 1989. Compilation of tRNA sequences and sequences of tRNA genes. Nucleic Acids Res 17(Suppl.):r1-r172.
25. Temin, H. M., and S. Mizutani. 1970. RNA-directed DNA polymerase in virions of Rous sarcoma virus. Nature 226:1211-1213.
26. His. J. Virol. 70:966-975.
27. Wakefield, J. K., and C. D. Morrow. 1996. Mutations within the primer binding site of the human immunodeficiency virus type 1 define sequence requirements essential for reverse transcription. Virology 220:290-298.
28. 3 J. Virol. 69:6021-6029.
29. Whitcomb, J. M., B. A. Ortiz-Conde, and S. H. Hughes. 1995. Replication of avian leukosis viruses with mutations at the primer binding site: use of alternative tRNAs as primers. J. Virol. 69:6228-6238.
30. His. Virology 226:306-317.