-
1
-
-
0346400157
-
Nonadiabatic molecular dynamics: Validation of the multiple spawning method for a multi-dimensional problem
-
in press
-
Ben-Nun, M., and T. Martinez. 1998. Nonadiabatic molecular dynamics: validation of the multiple spawning method for a multi-dimensional problem. J. Chem. Phys. (in press).
-
(1998)
J. Chem. Phys.
-
-
Ben-Nun, M.1
Martinez, T.2
-
2
-
-
0032228252
-
Quantum dynamics of retinal's femtosecond photoisomerization in bacteriorhodopsin
-
in press
-
Ben-Nun, M., F. Molnar, H. Lu, J. C. Phillips, T. J. Martínez, and K. Schulten. 1998. Quantum dynamics of retinal's femtosecond photoisomerization in bacteriorhodopsin. Faraday Discuss. 110 (in press).
-
(1998)
Faraday Discuss
, vol.110
-
-
Ben-Nun, M.1
Molnar, F.2
Lu, H.3
Phillips, J.C.4
Martínez, T.J.5
Schulten, K.6
-
3
-
-
0000321633
-
Quantum simulation of reaction dynamics by density matrix evolution
-
Berendsen, H., and J. Mavri. 1993. Quantum simulation of reaction dynamics by density matrix evolution. J. Phys. Chem. 97:13464-13468.
-
(1993)
J. Phys. Chem.
, vol.97
, pp. 13464-13468
-
-
Berendsen, H.1
Mavri, J.2
-
4
-
-
36549094506
-
Two photon spectroscopy of light adapted bacteriorhodopsin
-
Birge, R. R., and C. F. Zhang. 1990. Two photon spectroscopy of light adapted bacteriorhodopsin. J. Chem. Phys. 92:7178-7195.
-
(1990)
J. Chem. Phys.
, vol.92
, pp. 7178-7195
-
-
Birge, R.R.1
Zhang, C.F.2
-
5
-
-
0001755637
-
Critically heterosymmetric biradicaloid geometries of the protonated schiff bases
-
Bonacic-Koutecky, V., K. Schoffel, and J. Michl. 1987. Critically heterosymmetric biradicaloid geometries of the protonated schiff bases. Theor. Chim. Acta. 72:459-474.
-
(1987)
Theor. Chim. Acta.
, vol.72
, pp. 459-474
-
-
Bonacic-Koutecky, V.1
Schoffel, K.2
Michl, J.3
-
6
-
-
0000563788
-
Quantum-classical molecular dynamics as an approximation of full quantum dynamics
-
Bornemann, F. A., P. Nettesheim, and C. Schütte. 1996. Quantum-classical molecular dynamics as an approximation of full quantum dynamics. J. Chem. Phys. 105:1074-1083.
-
(1996)
J. Chem. Phys.
, vol.105
, pp. 1074-1083
-
-
Bornemann, F.A.1
Nettesheim, P.2
Schütte, C.3
-
7
-
-
0024289369
-
Vibrational spectroscopy of bacteriorhodopsin mutants: Light-driven proton transport involves protonation changes of aspartic acid residues 85, 96, and 212
-
Braiman, M. S., T. Mogi, T. Marti, L. J. Stern. H. G. Khorana, and K. J. Rothschild. 1988. Vibrational spectroscopy of bacteriorhodopsin mutants: light-driven proton transport involves protonation changes of aspartic acid residues 85, 96, and 212. Biochemistry. 27:8516-8520.
-
(1988)
Biochemistry
, vol.27
, pp. 8516-8520
-
-
Braiman, M.S.1
Mogi, T.2
Marti, T.3
Stern, L.J.4
Khorana, H.G.5
Rothschild, K.J.6
-
8
-
-
84986512474
-
CHARMM: A program for macromolecular energy, minimization, and dynamics calculations
-
Brooks, B. R., R. E. Bruccoleri, B. D. Olafson, D. J. States, S. Swaminathan, and M. Karplus. 1983. CHARMM: a program for macromolecular energy, minimization, and dynamics calculations. J. Comp. Chem. 4:187-217.
-
(1983)
J. Comp. Chem.
, vol.4
, pp. 187-217
-
-
Brooks, B.R.1
Bruccoleri, R.E.2
Olafson, B.D.3
States, D.J.4
Swaminathan, S.5
Karplus, M.6
-
10
-
-
77956826299
-
Nonadiabatic charge transfer
-
Crothers, D. S. F. 1981. Nonadiabatic charge transfer. Adv. Atomic Mol. Phys. 17:54-98.
-
(1981)
Adv. Atomic Mol. Phys.
, vol.17
, pp. 54-98
-
-
Crothers, D.S.F.1
-
11
-
-
0001649161
-
Excited-state reaction dynamics of bacteriorhodopsin studied by femtosecond spectroscopy
-
Dobler, J., W. Zinth, W. Kaiser, and D. Oesterhelt. 1988. Excited-state reaction dynamics of bacteriorhodopsin studied by femtosecond spectroscopy. Chem. Phys. Lett. 144:215-220.
-
(1988)
Chem. Phys. Lett.
, vol.144
, pp. 215-220
-
-
Dobler, J.1
Zinth, W.2
Kaiser, W.3
Oesterhelt, D.4
-
12
-
-
0027752269
-
Femtosecond time-resolved fluorescence spectroscopy of bacteriorhodopsin: Direct observation of excited state dynamics in the primary step of the proton pump cycle
-
Du, M., and G. Fleming. 1993. Femtosecond time-resolved fluorescence spectroscopy of bacteriorhodopsin: direct observation of excited state dynamics in the primary step of the proton pump cycle. Biol. Cybern. 48:101-111.
-
(1993)
Biol. Cybern.
, vol.48
, pp. 101-111
-
-
Du, M.1
Fleming, G.2
-
13
-
-
0000945541
-
Ab initio study on the excitation energies of the protonated schiff base of 11-cis-retinal
-
Du, P., and R. Davidson. 1990. Ab initio study on the excitation energies of the protonated schiff base of 11-cis-retinal. J. Phys. Chem. 94: 7013-1020.
-
(1990)
J. Phys. Chem.
, vol.94
, pp. 7013-11020
-
-
Du, P.1
Davidson, R.2
-
14
-
-
0002979180
-
Light energy transduction in bacteriorhodopsin
-
M. Jacobson, editor. CRC Press, Boca Raton, FL
-
Ebrey, T. 1993. Light energy transduction in bacteriorhodopsin. In Thermodynamics of Membranes, Receptors and Channels. M. Jacobson, editor. CRC Press, Boca Raton, FL. 353-387.
-
(1993)
Thermodynamics of Membranes, Receptors and Channels
, pp. 353-387
-
-
Ebrey, T.1
-
15
-
-
0032549731
-
Chemical dynamics in proteins: The photoisomerization of retinal in bacteriorhodopsin
-
Gai, F., K. C. Hasson, J. C. McDonald, and P. A. Anfinrud. 1998. Chemical dynamics in proteins: the photoisomerization of retinal in bacteriorhodopsin. Science. 279:1886-1891.
-
(1998)
Science.
, vol.279
, pp. 1886-1891
-
-
Gai, F.1
Hasson, K.C.2
McDonald, J.C.3
Anfinrud, P.A.4
-
16
-
-
0025034111
-
Quantum efficiency of the photochemical cycle of bacteriorhodopsin
-
Govindjee, R., S. P. Balashov, and T. G. Ebrey. 1990. Quantum efficiency of the photochemical cycle of bacteriorhodopsin. Biophys. J. 58: 597-608.
-
(1990)
Biophys. J.
, vol.58
, pp. 597-608
-
-
Govindjee, R.1
Balashov, S.P.2
Ebrey, T.G.3
-
17
-
-
0029903197
-
Electron-crystallographic refinement of the structure of bacteriorhopsin
-
Grigorieff, N., T. Ceska, K. Downing, J. Baldwin, and R. Henderson. 1996. Electron-crystallographic refinement of the structure of bacteriorhopsin. J. Mol. Biol. 259:393-421.
-
(1996)
J. Mol. Biol.
, vol.259
, pp. 393-421
-
-
Grigorieff, N.1
Ceska, T.2
Downing, K.3
Baldwin, J.4
Henderson, R.5
-
18
-
-
0030299802
-
The photoisomerization of retinal in bacteriorhodopsin: A new model
-
Hasson, K., F. Gai, and P. Anfinrud. 1996. The photoisomerization of retinal in bacteriorhodopsin: a new model. Proc. Natl. Acad. Sci. USA. 93:15124-15129.
-
(1996)
Proc. Natl. Acad. Sci. USA.
, vol.93
, pp. 15124-15129
-
-
Hasson, K.1
Gai, F.2
Anfinrud, P.3
-
19
-
-
0025292355
-
Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy
-
Henderson, R., J. M. Baldwin, T. A. Ceska, F. Zemlin, E. Beckmann, and K. H. Downing. 1990. Model for the structure of bacteriorhodopsin based on high-resolution electron cryo-microscopy. J. Mol. Biol. 213: 899-929.
-
(1990)
J. Mol. Biol.
, vol.213
, pp. 899-929
-
-
Henderson, R.1
Baldwin, J.M.2
Ceska, T.A.3
Zemlin, F.4
Beckmann, E.5
Downing, K.H.6
-
20
-
-
0002192623
-
Linear polyene electronic structure and potential surfaces
-
E. C. Lim, editor. Academic Press, New York
-
Hudson, B. S., B. E. Kohler, and K. Schulten. 1982. Linear polyene electronic structure and potential surfaces. In Excited States, Vol. 6. E. C. Lim, editor. Academic Press, New York. 1-95.
-
(1982)
Excited States
, vol.6
, pp. 1-95
-
-
Hudson, B.S.1
Kohler, B.E.2
Schulten, K.3
-
21
-
-
0031041820
-
Photoproducts of bacteriorhodopsin mutants: A molecular dynamics study
-
Humphrey, W., E. Bamberg, and K. Schulten. 1997. Photoproducts of bacteriorhodopsin mutants: a molecular dynamics study. Biophys. J. 72:1347-1356.
-
(1997)
Biophys. J.
, vol.72
, pp. 1347-1356
-
-
Humphrey, W.1
Bamberg, E.2
Schulten, K.3
-
23
-
-
0028258544
-
Molecular dynamics study of bacteriorhodopsin and artificial pigments
-
Humphrey, W., I. Logunov, K. Schulten, and M. Sheves. 1994. Molecular dynamics study of bacteriorhodopsin and artificial pigments. Biochemistry. 33:3668-3678.
-
(1994)
Biochemistry
, vol.33
, pp. 3668-3678
-
-
Humphrey, W.1
Logunov, I.2
Schulten, K.3
Sheves, M.4
-
24
-
-
0001513332
-
Molecular dynamics study of the early intermediates in the bacteriorhodopsin photocycle
-
Humphrey, W., D. Xu, M. Sheves, and K. Schulten. 1995. Molecular dynamics study of the early intermediates in the bacteriorhodopsin photocycle. J. Phys. Chem. 99:14549-14560.
-
(1995)
J. Phys. Chem.
, vol.99
, pp. 14549-14560
-
-
Humphrey, W.1
Xu, D.2
Sheves, M.3
Schulten, K.4
-
25
-
-
0000034171
-
Phase coherence and nonadiabatic transition at a level crossing in a periodically driven two-level system
-
Kayanuma, Y. 1993. Phase coherence and nonadiabatic transition at a level crossing in a periodically driven two-level system. Phys. Rev. B. 47: 9940-9943.
-
(1993)
Phys. Rev. B.
, vol.47
, pp. 9940-9943
-
-
Kayanuma, Y.1
-
26
-
-
0030768310
-
Surface of bacteriorhodopsin revealed by high-resolution electron crystallography
-
Kimura, Y., D. G. Vassylyev, E. Miyazawa, A. Kidera, M. Matsushima, K. Mitsuoka, K. Murata, T. Hirai, and Y. Fujiyoshi. 1997. Surface of bacteriorhodopsin revealed by high-resolution electron crystallography. Nature. 389:206-211.
-
(1997)
Nature
, vol.389
, pp. 206-211
-
-
Kimura, Y.1
Vassylyev, D.G.2
Miyazawa, E.3
Kidera, A.4
Matsushima, M.5
Mitsuoka, K.6
Murata, K.7
Hirai, T.8
Fujiyoshi, Y.9
-
27
-
-
5944242677
-
An efficient second-order MC SCF method for long configuration expansions
-
Knowles, P. J., and H.-J. Werner. 1985. An efficient second-order MC SCF method for long configuration expansions. Chem. Phys. Lett. 115: 259-267.
-
(1985)
Chem. Phys. Lett.
, vol.115
, pp. 259-267
-
-
Knowles, P.J.1
Werner, H.-J.2
-
29
-
-
0031282975
-
Mechanism of ion transport across membranes: Bacteriorhodopsin as a prototype for proton pumps
-
Lanyi, J. 1997. Mechanism of ion transport across membranes: bacteriorhodopsin as a prototype for proton pumps. J. Biol. Chem. 272: 31290-31212.
-
(1997)
J. Biol. Chem.
, vol.272
, pp. 31290-131212
-
-
Lanyi, J.1
-
30
-
-
0030010933
-
Replacement effects of neutral amino acid residues of different molecular volumes in the retinal binding cavity of bacteriorhodopsin on the dynamics of its primary process
-
Logunov, S., M. El-Sayed, and J. Lanyi. 1996a. Replacement effects of neutral amino acid residues of different molecular volumes in the retinal binding cavity of bacteriorhodopsin on the dynamics of its primary process. Biophys. J. 70:2875-2881.
-
(1996)
Biophys. J.
, vol.70
, pp. 2875-2881
-
-
Logunov, S.1
El-Sayed, M.2
Lanyi, J.3
-
31
-
-
33751130970
-
Photoisomerization quantum yield and apparent energy content of the K intermediate in the photocycles of bacteriorhodopsin, its mutants D85N, R82Q, and D212N, and deionized blue bacteriorhodopsin
-
Logunov, S., M. El-Sayed, and L. Song. 1996b. Photoisomerization quantum yield and apparent energy content of the K intermediate in the photocycles of bacteriorhodopsin, its mutants D85N, R82Q, and D212N, and deionized blue bacteriorhodopsin. J. Phys. Chem. 100:2391-2398.
-
(1996)
J. Phys. Chem.
, vol.100
, pp. 2391-2398
-
-
Logunov, S.1
El-Sayed, M.2
Song, L.3
-
32
-
-
84961983828
-
Quantum chemistry - Molecular dynamics study of the dark adaptation process in bacteriorhodopsin
-
Logunov, I., and K. Schulten. 1996. Quantum chemistry - molecular dynamics study of the dark adaptation process in bacteriorhodopsin. J. Am. Chem. Soc. 118:9727-9735.
-
(1996)
J. Am. Chem. Soc.
, vol.118
, pp. 9727-9735
-
-
Logunov, I.1
Schulten, K.2
-
33
-
-
0016723355
-
Bacteriorhodopsin: A light-driven proton pump in Halobacterium halobium
-
Lozier, R. H., R. A. Bogomolni, and W. Stoeckenius. 1975. Bacteriorhodopsin: a light-driven proton pump in Halobacterium halobium. Biophys. J. 15:955-962.
-
(1975)
Biophys. J.
, vol.15
, pp. 955-962
-
-
Lozier, R.H.1
Bogomolni, R.A.2
Stoeckenius, W.3
-
34
-
-
0031553028
-
Molecular collision dynamics on several electronic states
-
Martinez, T., M. Ben-Nun, and R. Levine. 1997. Molecular collision dynamics on several electronic states. J. Phys. Chem. A. 101: 6389-6402.
-
(1997)
J. Phys. Chem. A.
, vol.101
, pp. 6389-6402
-
-
Martinez, T.1
Ben-Nun, M.2
Levine, R.3
-
35
-
-
0024279842
-
Direct observation of the femtosecond excited-state cis-trans isomerization in bacteriorhodopsin
-
Mathies, R. A., C. H. Brito Cruz, W. T. Pollard, and C. V. Shank. 1988. Direct observation of the femtosecond excited-state cis-trans isomerization in bacteriorhodopsin. Science. 240:777-779.
-
(1988)
Science
, vol.240
, pp. 777-779
-
-
Mathies, R.A.1
Brito Cruz, C.H.2
Pollard, W.T.3
Shank, C.V.4
-
36
-
-
33751385143
-
Influence of solvent on intramolecular proton transfer in hydrogen malonate -molecular dynamics simulation study of tunneling by density matrix evolution and nonequilibrium solvation
-
Mavri, J., H. J. C. Berendsen, and W. F. V. Gunsteren. 1993. Influence of solvent on intramolecular proton transfer in hydrogen malonate -molecular dynamics simulation study of tunneling by density matrix evolution and nonequilibrium solvation. J. Phys. Chem. 97: 13469-13476.
-
(1993)
J. Phys. Chem.
, vol.97
, pp. 13469-13476
-
-
Mavri, J.1
Berendsen, H.J.C.2
Gunsteren, W.F.V.3
-
38
-
-
0024024413
-
Aspartic acid substitutions affect proton translocation by bacteriorhodopsin
-
Mogi, T., L. Stern, T. Marti, B. Chao, and H. Khorana. 1988. Aspartic acid substitutions affect proton translocation by bacteriorhodopsin. Proc. Natl. Acad. Sci. USA. 85:4148-4152.
-
(1988)
Proc. Natl. Acad. Sci. USA.
, vol.85
, pp. 4148-4152
-
-
Mogi, T.1
Stern, L.2
Marti, T.3
Chao, B.4
Khorana, H.5
-
40
-
-
8344276781
-
NAMD - A parallel, object-oriented molecular dynamics program
-
Nelson, M., W. Humphrey, A. Gursoy, A. Dalke, L. Kalé, R. D. Skeel, and K. Schulten. 1996. NAMD - a parallel, object-oriented molecular dynamics program. J. Supercomput. Appl. 10:251-268.
-
(1996)
J. Supercomput. Appl.
, vol.10
, pp. 251-268
-
-
Nelson, M.1
Humphrey, W.2
Gursoy, A.3
Dalke, A.4
Kalé, L.5
Skeel, R.D.6
Schulten, K.7
-
41
-
-
0026623260
-
A unifying concept for ion translocation in retinal proteins
-
Oesterhelt, D., I. Tittor, and E. Bamberg. 1992. A unifying concept for ion translocation in retinal proteins. J. Bioenerg. Biomembr. 24:181-191.
-
(1992)
J. Bioenerg. Biomembr.
, vol.24
, pp. 181-191
-
-
Oesterhelt, D.1
Tittor, I.2
Bamberg, E.3
-
42
-
-
0001319898
-
Excited-state cis-trans isomerization of cis-hexatriene. A CAS-SCF computational study
-
Olivucci, M., F. Bernardi, P. Celani, I. Ragazos, and M. A. Robb. 1994. Excited-state cis-trans isomerization of cis-hexatriene. A CAS-SCF computational study. J. Am. Chem. Soc. 116:1077-1085.
-
(1994)
J. Am. Chem. Soc.
, vol.116
, pp. 1077-1085
-
-
Olivucci, M.1
Bernardi, F.2
Celani, P.3
Ragazos, I.4
Robb, M.A.5
-
43
-
-
4444254527
-
A conical intersection mechanism for the photochemistry of butadiene: A MC-SCF study
-
Ollivuci, M., I. Ragazos, F. Bernardi, and M. Robb. 1993. A conical intersection mechanism for the photochemistry of butadiene: a MC-SCF study. J. Am. Chem. Soc. 115:3710-3721.
-
(1993)
J. Am. Chem. Soc.
, vol.115
, pp. 3710-3721
-
-
Ollivuci, M.1
Ragazos, I.2
Bernardi, F.3
Robb, M.4
-
44
-
-
0025016817
-
Substitution of amino acids Asp-85, Asp-212, and Arg-82 in bacteriorhodopsin affects the proton release phase of the pump and the pK of the Schiff base
-
Otto, H., T. Marti, M. Holz, T. Mogi, L. J. Stern, F. Engel, H. G. Khorana, and M. P. Heyn. 1990. Substitution of amino acids Asp-85, Asp-212, and Arg-82 in bacteriorhodopsin affects the proton release phase of the pump and the pK of the Schiff base. Proc. Natl. Acad. Sci. USA. 87:1018-1022.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 1018-1022
-
-
Otto, H.1
Marti, T.2
Holz, M.3
Mogi, T.4
Stern, L.J.5
Engel, F.6
Khorana, H.G.7
Heyn, M.P.8
-
45
-
-
0030864048
-
X-ray structure of bacteriorhodopsin at 2.5 Ångstroms from microcrystals grown in lipidic cubic phases
-
Pebay-Peyroula, E., G. Rummel, J. P. Rosenbusch, and E. M. Landau. 1997. X-ray structure of bacteriorhodopsin at 2.5 Ångstroms from microcrystals grown in lipidic cubic phases. Science. 227:1676-1691.
-
(1997)
Science
, vol.227
, pp. 1676-1691
-
-
Pebay-Peyroula, E.1
Rummel, G.2
Rosenbusch, J.P.3
Landau, E.M.4
-
46
-
-
0002650691
-
Photochemical quantum yield of bacteriorhodopsin from resonance Raman scattering as a probe for photolysis
-
Schneider, G., R. Diller, and M. Stockburger. 1989. Photochemical quantum yield of bacteriorhodopsin from resonance Raman scattering as a probe for photolysis. Chem. Phys. 131:17-29.
-
(1989)
Chem. Phys.
, vol.131
, pp. 17-29
-
-
Schneider, G.1
Diller, R.2
Stockburger, M.3
-
47
-
-
0001595417
-
The spectra of carbonium ions, cyanine dyes, and protonated Schiff base polyenes
-
Schulten, K., U. Dinur, and B. Honig. 1980. The spectra of carbonium ions, cyanine dyes, and protonated Schiff base polyenes. J. Chem. Phys. 73:3927-3935.
-
(1980)
J. Chem. Phys.
, vol.73
, pp. 3927-3935
-
-
Schulten, K.1
Dinur, U.2
Honig, B.3
-
48
-
-
85005653287
-
Molecular dynamics studies of bacteriorhodopsin's photocycles
-
Schulten, K., W. Humphrey, I. Logunov, M. Sheves, and D. Xu. 1995. Molecular dynamics studies of bacteriorhodopsin's photocycles. Isr. J. Chem. 35:447-464.
-
(1995)
Isr. J. Chem.
, vol.35
, pp. 447-464
-
-
Schulten, K.1
Humphrey, W.2
Logunov, I.3
Sheves, M.4
Xu, D.5
-
49
-
-
3042528708
-
On the origin of a low-lying forbidden transition in polyenes and related molecules
-
Schulten, K., and M. Karplus. 1972. On the origin of a low-lying forbidden transition in polyenes and related molecules. Chem. Phys. Lett. 14: 305-309.
-
(1972)
Chem. Phys. Lett.
, vol.14
, pp. 305-309
-
-
Schulten, K.1
Karplus, M.2
-
50
-
-
0030126484
-
Quantum decoherence and the isotope effect in condensed phase nonadiabatic molecular dynamics simulations
-
Schwartz, B., E. Bittner, O. Prezhdo, and P. Rossky. 1996. Quantum decoherence and the isotope effect in condensed phase nonadiabatic molecular dynamics simulations. J. Chem. Phys. 104:5492-5955.
-
(1996)
J. Chem. Phys.
, vol.104
, pp. 5492-5955
-
-
Schwartz, B.1
Bittner, E.2
Prezhdo, O.3
Rossky, P.4
-
51
-
-
0000897059
-
Theoretical study of the electronic spectrum of all-trans-1,3.5,7-octatetraene
-
Serrano-Andreas, L., R. Lindh, B. Roos, and M. Merchan. 1993a. Theoretical study of the electronic spectrum of all-trans-1,3.5,7-octatetraene. J. Phys. Chem. 97:9360-9368.
-
(1993)
J. Phys. Chem.
, vol.97
, pp. 9360-9368
-
-
Serrano-Andreas, L.1
Lindh, R.2
Roos, B.3
Merchan, M.4
-
52
-
-
0004705927
-
Towards an accurate molecular orbital theory for excited states: Ethene, butadiene, and hexatriene
-
Serrano-Andreas, L., M. Merchan, I. Nebot-Gil, and B. Roos. 1993b. Towards an accurate molecular orbital theory for excited states: ethene, butadiene, and hexatriene. J. Chem. Phys. 98:3151-3162.
-
(1993)
J. Chem. Phys.
, vol.98
, pp. 3151-3162
-
-
Serrano-Andreas, L.1
Merchan, M.2
Nebot-Gil, I.3
Roos, B.4
-
53
-
-
0027303125
-
Protein catalysis of the retinal subpicosecond photo-isomerization in the primary process of bacteriorhodopsin photosynthesis
-
Song, L., M. A. El-Sayed, and J. K. Lanyi. 1993. Protein catalysis of the retinal subpicosecond photo-isomerization in the primary process of bacteriorhodopsin photosynthesis. Science. 261:891-894.
-
(1993)
Science
, vol.261
, pp. 891-894
-
-
Song, L.1
El-Sayed, M.A.2
Lanyi, J.K.3
-
54
-
-
84989742241
-
Isomer composition and spectra of the dark and light adapted forms of artificial bacteriorhodopsins
-
Steinberg, G., N. Friedman, M. Sheves, and M. Ottolenghi. 1991. Isomer composition and spectra of the dark and light adapted forms of artificial bacteriorhodopsins. Photochem. Photobiol. 54:969-676.
-
(1991)
Photochem. Photobiol.
, vol.54
, pp. 969-1676
-
-
Steinberg, G.1
Friedman, N.2
Sheves, M.3
Ottolenghi, M.4
-
55
-
-
84984201096
-
The active site of bacteriorhodopsin. Two-photon spectroscopic evidence for a positively charged chromophore binding site mediated by calcium
-
Stuart, J. A., B. W. Vought, C. F. Zhang, and R. R. Birge. 1995. The active site of bacteriorhodopsin. Two-photon spectroscopic evidence for a positively charged chromophore binding site mediated by calcium. Biospectroscopy. 1:9-28.
-
(1995)
Biospectroscopy
, vol.1
, pp. 9-28
-
-
Stuart, J.A.1
Vought, B.W.2
Zhang, C.F.3
Birge, R.R.4
-
56
-
-
0025157075
-
Protonation state of Asp (Glu)-85 regulates the purple-to-blue transition in bacteriorhodopsin mutants Arg-82 → Ala and Asp-85 → Glu: The blue form is inactive in proton translocation
-
Subramaniam, S., T. Marti, and H. G. Khorana. 1990. Protonation state of Asp (Glu)-85 regulates the purple-to-blue transition in bacteriorhodopsin mutants Arg-82 → Ala and Asp-85 → Glu: the blue form is inactive in proton translocation. Proc. Natl. Acad. Sci. USA. 87:1013-1017.
-
(1990)
Proc. Natl. Acad. Sci. USA
, vol.87
, pp. 1013-1017
-
-
Subramaniam, S.1
Marti, T.2
Khorana, H.G.3
-
57
-
-
0000127455
-
Molecular dynamics of the primary photochemical event in rhodopsin
-
Tallent, J. R., E. W. Hyde, L. A. Findsen, G. C. Fox, and R. R. Birge. 1992. Molecular dynamics of the primary photochemical event in rhodopsin. J. Am. Chem. Soc. 114:1581-1592.
-
(1992)
J. Am. Chem. Soc.
, vol.114
, pp. 1581-1592
-
-
Tallent, J.R.1
Hyde, E.W.2
Findsen, L.A.3
Fox, G.C.4
Birge, R.R.5
-
58
-
-
0006589319
-
The low-lying electronic excitations in long polyenes: A PPP-MRD-CI study
-
Tavan, P., and K. Schulten. 1986. The low-lying electronic excitations in long polyenes: a PPP-MRD-CI study. J. Chem. Phys. 85:6602-6609.
-
(1986)
J. Chem. Phys.
, vol.85
, pp. 6602-6609
-
-
Tavan, P.1
Schulten, K.2
-
59
-
-
13044304431
-
Molecular dynamics with electronic transitions
-
Tully, J. C. 1990. Molecular dynamics with electronic transitions. J. Chem. Phys. 93:1061-1071.
-
(1990)
J. Chem. Phys.
, vol.93
, pp. 1061-1071
-
-
Tully, J.C.1
-
61
-
-
0001604008
-
The dynamics of the primary event in rhodopsins revisited
-
Warshel, A., Z.T. Chu, and J.-K. Hwang. 1991. The dynamics of the primary event in rhodopsins revisited. Chem. Phys. 158:303-314.
-
(1991)
Chem. Phys.
, vol.158
, pp. 303-314
-
-
Warshel, A.1
Chu, Z.T.2
Hwang, J.-K.3
-
62
-
-
85050310023
-
Matrix-formulated direct multiconfiguration self-consistent field and multiconfiguration reference configuration-interaction methods
-
Werner, H.-J. 1987. Matrix-formulated direct multiconfiguration self-consistent field and multiconfiguration reference configuration-interaction methods. Adv. Chem. Phys. 69:1-62.
-
(1987)
Adv. Chem. Phys.
, vol.69
, pp. 1-62
-
-
Werner, H.-J.1
-
63
-
-
0037780883
-
A second order multiconfiguration SCF procedure with optimum convergence
-
Werner, H.-J., and P. J. Knowles. 1985. A second order multiconfiguration SCF procedure with optimum convergence. J. Chem. Phys. 82: 5053-5063.
-
(1985)
J. Chem. Phys.
, vol.82
, pp. 5053-5063
-
-
Werner, H.-J.1
Knowles, P.J.2
-
64
-
-
0030058834
-
Molecular dynamics study of early picosecond events in the bacteriorhodopsin photocycle: Dielectric response, vibrational cooling and the J, K intermediates
-
Xu, D., C. Martin, and K. Schulten. 1996. Molecular dynamics study of early picosecond events in the bacteriorhodopsin photocycle: dielectric response, vibrational cooling and the J, K intermediates. Biophys. J. 70:453-460.
-
(1996)
Biophys. J.
, vol.70
, pp. 453-460
-
-
Xu, D.1
Martin, C.2
Schulten, K.3
-
65
-
-
0028845662
-
Molecular dynamics study of the M412 intermediate of bacteriorhodopsin
-
Xu, D., M. Sheves, and K. Schulten. 1995. Molecular dynamics study of the M412 intermediate of bacteriorhodopsin. Biophys. J. 69:2745-2760.
-
(1995)
Biophys. J.
, vol.69
, pp. 2745-2760
-
-
Xu, D.1
Sheves, M.2
Schulten, K.3
-
66
-
-
0001332554
-
Non-adiabatic crossing of energy levels
-
Zener, C. 1932. Non-adiabatic crossing of energy levels. Proc. Natl. Acad. Sci. USA. A137:696-702.
-
(1932)
Proc. Natl. Acad. Sci. USA
, vol.A137
, pp. 696-702
-
-
Zener, C.1
-
67
-
-
0027476774
-
Molecular dynamics study of the proton pump cycle of bacteriorhodopsin
-
Zhou, F., A. Windemuth, and K. Schulten. 1993. Molecular dynamics study of the proton pump cycle of bacteriorhodopsin. Biochemistry. 32:2291-2306.
-
(1993)
Biochemistry
, vol.32
, pp. 2291-2306
-
-
Zhou, F.1
Windemuth, A.2
Schulten, K.3
|