Characterization of BpH3, an H-NS-like protein in Bordetella pertussis

Molecular Microbiology

Volumn 24, Issue 4, 1997, Pages 815-823

  Goyard, Sophie ^a   Bertin, Philippe ^a  

^a INSTITUT PASTEUR   (France)

Author keywords

[No Author keywords available]

Indexed keywords

BETA GLUCOSIDASE; DNA BINDING PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; BORDETELLA PERTUSSIS; CONTROLLED STUDY; DNA BINDING; NONHUMAN; PHYLOGENY; PRIORITY JOURNAL; PROMOTER REGION; TRANSCRIPTION REGULATION;

EID: 0030916257     PISSN: 0950382X     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-2958.1997.3891753.x     Document Type: Article

References (52)

1. Aricó, B., Miller, J.F., Roy, C., Stibitz, S., Monack, D., Falkow, S., Gross, R., and Rappuoli, R. (1989) Sequences required for expression of Bordetella pertussis factors share homology with procaryotic signal transduction proteins. Proc Natl Acad Sci USA 86: 6671-6675.
2. Barr, G.C., Bhriain, N.N., and Dorman, C.J. (1992) Identification of two new genetically active regions associated with the osmZ locus of Escherichia coli: role in regulation of proUexpression and mutagenic effect at cya, the structural gene for adenylate cyclase. J Bacteriol 174: 998-1006.
3. s-dependent genes in Escherichia coli. J Bacteriol 177: 3455-3464.
4. Bartolomé, B., Jubete, Y., Martinez, E., and de la Cruz, F. (1991) Construction and properties of a family of pACYC184-derived cloning vectors compatible with pBR322 and its derivatives. Gene 102: 75-78.
5. Bertin, P., Terao, E., Lee, E.H., Lejeune, P., Colson, C., Danchin, A., and Collatz, E. (1994) The H-NS protein is involved in the biogenesis of flagella in Escherichia coli. J Bacteriol 176: 5537-5540.
6. Bracco, L., Kotlarz, D., Kolb, A., Diekmann, S., and Buc, H. (1989) Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli. EMBO J 13: 4289-4296.
7. Bruni, C.B., Colantuoni, V., Sbordone, L., Cortese, R., and Blasi, F. (1977) Biochemical and regulatory properties of Escherichia coli K-12 his T mutants. J Bacteriol 130: 4-10.
8. Cornelis, G.R., Sluiters, C., Delor, I., Geib, D., Kaniga, K., Lambert de Rouvroit, C., Sory, M.P., Vanooteghem, J.C., and Michiels, T. (1991) ymoA, a Yersinia enterocolitica chromosomal gene modulating the expression of virulence functions. Mol Microbiol 5: 1023-1034.
9. Corpet, F. (1988) Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res 16: 10881-10890.
10. Defez, R., and De Felice, M. (1981) Cryptic operon for β-glucoside metabolism in Escherichia coli K-12: genetic evidence for a regulatory protein. Genetics 97: 11-25.
11. Deretic, V., Hibler, N.S., and Holt, S.C. (1992) Immunocytochemical analysis of AIgP (Hp1), a histonelike element participating in control of mucoidy in Pseudomonas aeruginosa. J Bacteriol 174: 824-831.
12. Falconi, M., McGovern, V., Gualerzi, C., Hillyard, D., and Higgins, N.P. (1991) Mutations altering chromosomal protein H-NS induce mini-Mu transposition. New Biol 3: 615-625.
13. Fleischmann, R.D., et al. (1995) Whole-genome random sequencing and assembly of Haemophilus influenzas Rd. Science 269: 496-512.
14. Goosen, N., and van de Putte, P. (1995) The regulation of transcription initiation by integration host factor. Mol Microbiol 16: 1-7.
15. Göransson, M., Sondén, B., Nilsson, P., Dagberg, B., Forsman, K., Emanuelsson, K., and Uhlin, B.E. (1990) Transcriptional silencing and thermoregulation of gene expression in Escherichia coli. Nature 344: 682-685.
16. Goyard, S. (1996) Identification and characterization of BpH2, a novel histone H1 homolog in Bordetella pertussis. J Bacteriol 178: 3066-3071.
17. Gross, R., and Rappuoli., R. (1989) Pertussis toxin promoter sequences involved in modulation. J Bacteriol 171: 4026-4030.
18. Hayat, M.A., and Mancarella, D.A. (1995) Nucleoid proteins. Micron 26: 461-480.
19. Higgins, C.F., Dorman, C.J., Stirling, D.A., Waddell, L., Booth, I.R., May, G., and Bremer, E. (1988) A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli. Cell 52: 569-584.
20. Hulton, C.S.J., Seirafi, A., Hinton, J.C.D., Sidebotham, J.M., Waddell, L., Pavitt, G.D., Owen-Hugues, T., Spassky, A., Buc, H., and Higgins, C.F. (1990) Histone-like protein H1 (H-NS), DNA supercoiling, and gene expression in bacteria. Cell 63: 631-642.
21. Jacquet, M., Cukier-Kahn, R., Pla, J., and Gros, F. (1971) A thermostable protein factor acting on in vitro DNA transcription. Biochem Biophys Res Commun 45: 1597-1607.
22. Jordi, B.J.A.M., Dagberg, B., de Haan, L.A.M., Hamers, A.M., van der Zeijst, B.A.M., Gaastra, W., and Uhlin, B.E. (1992) The positive regulator CfaD overcomes the repression mediated by histone-like protein H-NS (H1) in the CFA/I fimbrial operon of Escherichia coli. EMBO J 11: 2627-2632.
23. Kaidow, A., Wachi, M., Nakamura, J., Magae, J., and Nagai, K. (1995) Anucleate cell production by Escherichia coli Δhns mutant lacking a histone-like protein, H-NS. J Bacteriol 177: 3589-3592.
24. Katayama, T., Takata, M., and Sekimizu, K. (1996) The nucleoid protein H-NS facilitates chromosome DNA replication in Escherichia coli dnaA mutants. J Bacteriol 178: 5790-5792.
25. Komeda, Y. (1982) Fusions of flagellar operons to lactose genes on a Mu lac bacteriophage. J Bacteriol 150: 16-26.
26. Laine, B., Sautiere, P., Spassky, A., and Rimsky, S. (1984) A DNA-binding protein from E. coli: isolation, characterization and its relationship with proteins H1 and B1. Biochem Biophys Res Commun 119: 1147-1153.
27. Laurent-Winter, C., Ngo, S., Danchin, A., and Bertin, P. (1997) Role of Escherichia coli histone-like nucleoid structuring protein in bacterial metabolism and stress response: identification of new targets by two-dimensional electrophoresis. Eur J Biochem 244: 767-773.
28. Lejeune, P., and Danchin, A. (1990) Mutations in the bg/Y gene increase the frequency of spontaneous deletions in Escherichia coli K-12. Proc Natl Acad Sci USA 87: 360-363.
29. Lucht, J.M., Dersch, P., Kempf, B., and Bremer, E. (1994) Interactions of the nucleoid-associated DNA-binding protein H-NS with the regulatory region of the osmotically controlled proU operon of Escherichia coli. J Biol Chem 269: 6578-6586.
30. May, G., Dersch, P., Haardt, M., Middendorf, A., and Bremer, E. (1990) The osmZ (bgIY) gene encodes the DNA-binding protein H-NS (H1a), a component of the Escherichia coli K-12 nucleoid. Mol Gen Genet 224: 81-90.
31. Miller, J.H. (1972) Experiments in Molecular Genetics. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press.
32. Oberto, J., Drlica, K., and Rouvière-Yaniv, J. (1994) Histones, HMG, HU, IHF: même combat. Biochimie 76: 901-908.
33. Owen-Hughes, T.A., Pavitt, G.D., Santos, D.S., Sidebotham, J.M., Hulton, C.S.J., Hinton, J.C.D., and Higgins, C.F. (1992) The chromatin-associated protein H-NS interacts with curved DNA to influence DNA topology and gene expression. Cell 71: 255-265.
34. Pardee, A.B., Jacob, F., and Monod, J. (1959) The genetic control and cytoplasmic expression of inductibility in the synthesis of β-galactosidase of Escherichia coli. J Mol Biol 1: 165-168.
35. Pittman, M. (1984) Genus Bordetella Moreno-Lopez 1952 178AL. In Bergey's Manual of Systematic Bacteriology, Vol. 1. Baltimore, USA: The Williams and Wilkins Co., pp. 388-393.
36. Pon, C.L., Calogero, R.A., and Gualerzi, C.O. (1988) Identification, cloning, nucleotide sequence and chromosomal map location of hns, the structural gene for Escherichia coli DNA-binding protein H-NS. Mol Gen Genet 212: 199-202.
37. Rimsky, S., and Spassky, A. (1990) Sequence determinants for H1 binding on Escherichia coli lac and gal promoters. Biochemistry 29: 3765-3771.
38. Sambrook, J., Fritsch, E.F., and Maniatis, T. (1989) Molecular Cloning: A Laboratory Manual. 2nd edn. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press.
39. Sanchez-Campillo, M., Dramsi, S., Gomez-Gomez, J.M., Michel, E., Dehoux, P., Cossart, P., Baquero, F., and Perez-Diaz, J.C. (1995) Modulation of DNA topology by flaR, a new gene from Listeria monocytogenes. Mol Microbiol 18: 801-811.
40. Scarlato, V., Prugnola, A., Aricó, B., and Rappuoli, R. (1991) The bvg-independent promoters show similar behaviour in different Bordetella species and share sequence homologies. Mol Microbiol 5: 2493-2498.
41. Scarlato, V., Aricó, B., Goyard, A., Ricci, S., Manetti, R., Prugnola, A., Manetti, R., Polverino-De-Laureto, P., Ullmann, A., and Rappuoli, R. (1995) A novel chromatin-forming histone H1 homologue is encoded by a dispensable and growth-regulated gene in Bordetella pertussis. Mol Microbiol 15: 871-881.
42. Sledjeski, D., and Gottesman, S. (1995) A small RNA acts as an antisilencer of the H-NS-silenced rscA gene of Escherichia coli. Proc Natl Acad Sci USA 92: 2003-2007.
43. Smith, T.F., and Waterman, M.S. (1981) Identification of common molecular subsequences. J Mol Biol 147: 195-197.
44. Sondén, B., and Uhlin, B.E. (1996) Coordinated and differential expression of histone-like proteins in Escherichia coli: regulation and function of the H-NS analog StpA. EMBO J 15: 4970-4980.
45. Spassky, A., Rimsky, S., Garreau, H., and Buc, H. (1984) H1a, an E. coli DNA-binding protein which accumulates in stationary phase, strongly compacts DNA in vitro. Nucleic Acids Res 12: 5321-5340.
46. Stainer, D.W., and Scholte, M.J. (1971) A simple chemically defined medium for the production of phase I Bordetella pertussis. J Gen Microbiol 63: 211-220.
47. Ueguchi, C., Suzuki, T., Yoshida, T., Tanaka, K.-I., and Mizuno, T. (1996) Systematic mutational analysis revealing the functional domain organization of Escherichia coli nucleoid protein H-NS. J Mol Biol 263: 149-162.
48. Ussery, D.W., Hinton, J.C.D., Jordi, B.J.A.M., Granum, P.E., Seirafi, A., Stephen, R.J., Tupper, A.E., Berridge, G., Sidebotham, J.M., and Higgins, C.F. (1994) The chromatin-associated protein H-NS. Biochimie 76: 968-980.
49. Yamada, H., Yoshida, T., Tanaka, K.I., Sasakawa, C., and Mizuno, T. (1991) Molecular analysis of the Escherichia coli hns gene encoding a DNA-binding protein, which preferentially recognizes curved DNA sequences. Mol Gen Genet 230: 332-336.
50. s, in Escherichia coli: involvement of the nucleoid protein H-NS. EMBO J 14: 594-602.
51. Zhang, A., Rimsky, S., Reaban, M.E., Buc, H., and Belfort, M. (1996) Escherichia coli protein analogs StpA and H-NS: regulatory loops, similar and disparate effects on nucleic acid dynamics. EMBO J 15: 1340-1349.
52. Zuber, F., Kotlars, D., Rimsky, S., and Buc, H. (1994) Modulated expression of promoters containing upstream curved DNA sequences by the Escherichia coli nucleoid protein H-NS. Mol Microbiol 12: 231-240.