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Volumn 15, Issue 6, 1996, Pages 1340-1349

Escherichia coli protein analogs StpA and H-NS: Regulatory loops, similar and disparate effects on nucleic acid dynamics

Author keywords

DNA supercoiling; Histone like proteins; RNA chaperone activities; Splicing; Transcription

Indexed keywords

CHAPERONE; CURVED DNA; GENE PRODUCT; NUCLEIC ACID; NUCLEOPROTEIN;

EID: 0029913710     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1002/j.1460-2075.1996.tb00476.x     Document Type: Article
Times cited : (181)

References (49)
  • 1
    • 0020527037 scopus 로고
    • Purification and properties of T4 phage thymidylate synthetase produced by the cloned gene in an amplification vector
    • Belfort, M , Moelleken, A., Maley, G.F. and Maley, F (1983) Purification and properties of T4 phage thymidylate synthetase produced by the cloned gene in an amplification vector. J. Biol. Chem., 258, 2045-2051.
    • (1983) J. Biol. Chem. , vol.258 , pp. 2045-2051
    • Belfort, M.1    Moelleken, A.2    Maley, G.F.3    Maley, F.4
  • 2
    • 0023512003 scopus 로고
    • Genetic delineation of functional components of the group I intron in the phage T4 td gene
    • Belfort, M., Chandry, P.S. and Pedersen-Lane, J. (1987) Genetic delineation of functional components of the group I intron in the phage T4 td gene. Cold Spring Harbor Symp. Quant Biol., 52, 181-192.
    • (1987) Cold Spring Harbor Symp. Quant Biol. , vol.52 , pp. 181-192
    • Belfort, M.1    Chandry, P.S.2    Pedersen-Lane, J.3
  • 3
    • 0025286439 scopus 로고
    • Genetic and molecular analysis of RNA splicing in Escherichia coli
    • Belfort, M., Ehrenman, K. and Chandry, P.S. (1990) Genetic and molecular analysis of RNA splicing in Escherichia coli. Methods Enzymol., 181, 521-539.
    • (1990) Methods Enzymol. , vol.181 , pp. 521-539
    • Belfort, M.1    Ehrenman, K.2    Chandry, P.S.3
  • 4
    • 0002739485 scopus 로고    scopus 로고
    • Integrated linkage map of Escherichia coli
    • Neidhardt, F.C., Curtiss, R. III, Ingraham, J.L., Lin, E.C.C., Low, K.B., Magassanik, B., Resnikoff, W., Riley, M., Schaechter, M. and Umbarger, H.E. (eds), ASM Press, Washington, DC
    • Berlyn, M., Low, K.B. and Rudd, K.E. (1996) Integrated linkage map of Escherichia coli. In Neidhardt, F.C., Curtiss, R. III, Ingraham, J.L., Lin, E.C.C., Low, K.B., Magassanik, B., Resnikoff, W., Riley, M., Schaechter, M. and Umbarger, H.E. (eds), Escherichia coli and Salmonella: Cellular and Molecular Biology. 2nd edn. ASM Press, Washington, DC, pp. 1715-1902.
    • (1996) Escherichia Coli and Salmonella: Cellular and Molecular Biology. 2nd Edn. , pp. 1715-1902
    • Berlyn, M.1    Low, K.B.2    Rudd, K.E.3
  • 5
    • 0025672667 scopus 로고
    • Mutations in bg/Y, the structural gene for the DNA-binding protein H1, affect expression of several Escherichia coli genes
    • Bertin, P., Lejeune, P., Laurent-Winter, C. and Danchin, A. (1990) Mutations in bg/Y, the structural gene for the DNA-binding protein H1, affect expression of several Escherichia coli genes. Biochimie, 72, 889-891.
    • (1990) Biochimie , vol.72 , pp. 889-891
    • Bertin, P.1    Lejeune, P.2    Laurent-Winter, C.3    Danchin, A.4
  • 6
    • 0024828668 scopus 로고
    • Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli
    • Bracco, L., Kotlarz, D., Kolb, A., Diekmann, S. and Buc, H. (1989) Synthetic curved DNA sequences can act as transcriptional activators in Escherichia coli. EMBO J., 8, 4289-4296.
    • (1989) EMBO J. , vol.8 , pp. 4289-4296
    • Bracco, L.1    Kotlarz, D.2    Kolb, A.3    Diekmann, S.4    Buc, H.5
  • 7
    • 0028276865 scopus 로고
    • E. coli proteins, including ribosomal protein S12, facilitate in vitro splicing of phage T4 introns by acting as RNA chaperones
    • Coetzee, T., Herschlag, D. and Belfort, M. (1994) E. coli proteins, including ribosomal protein S12, facilitate in vitro splicing of phage T4 introns by acting as RNA chaperones. Genes Dev., 8, 1575-1588.
    • (1994) Genes Dev. , vol.8 , pp. 1575-1588
    • Coetzee, T.1    Herschlag, D.2    Belfort, M.3
  • 8
    • 0027258405 scopus 로고
    • Synthesis of the Escherichia coli K-12 nucleoid-associated DNA-binding protein H-NS is subjected to growth-phase control and autoregulation
    • Dersch, P., Schmidt, K. and Bremer, E. (1993) Synthesis of the Escherichia coli K-12 nucleoid-associated DNA-binding protein H-NS is subjected to growth-phase control and autoregulation. Mol. Microbiol., 8, 875-889.
    • (1993) Mol. Microbiol. , vol.8 , pp. 875-889
    • Dersch, P.1    Schmidt, K.2    Bremer, E.3
  • 9
    • 0021760092 scopus 로고
    • A comprehensive set of sequence analysis programs for the VAX
    • Devereux, J , Haeberli, P. and Smithies, O. (1984) A comprehensive set of sequence analysis programs for the VAX. Nucleic Acids Res., 12, 387-395.
    • (1984) Nucleic Acids Res. , vol.12 , pp. 387-395
    • Devereux, J.1    Haeberli, P.2    Smithies, O.3
  • 10
    • 0025342874 scopus 로고
    • DNA supercoiling and environmental regulation of virulence gene expression in Shigella flexneri
    • Dorman, C.J., Bhriain, N.N. and Higgins, C.F. (1990) DNA supercoiling and environmental regulation of virulence gene expression in Shigella flexneri. Nature, 344, 789-792.
    • (1990) Nature , vol.344 , pp. 789-792
    • Dorman, C.J.1    Bhriain, N.N.2    Higgins, C.F.3
  • 12
    • 0024004997 scopus 로고
    • Proteins from the prokaryotic nucleoid: Primary and quaternary structure of the 15-kD Escherichia coli DNA binding protein H-NS
    • Falconi, M., Gualtieri, M.T., La Teana, A., Losso, M.A. and Pon, C.L. (1988) Proteins from the prokaryotic nucleoid: primary and quaternary structure of the 15-kD Escherichia coli DNA binding protein H-NS. Mol. Microbiol., 2, 323-329.
    • (1988) Mol. Microbiol. , vol.2 , pp. 323-329
    • Falconi, M.1    Gualtieri, M.T.2    La Teana, A.3    Losso, M.A.4    Pon, C.L.5
  • 13
    • 0025859785 scopus 로고
    • Mutations altering chromosomal protein H-NS induce mini-Mu transposition
    • Falconi, M., McGovern, V , Gualerzi, C., Hillyard, D. and Higgins, N.P. (1991) Mutations altering chromosomal protein H-NS induce mini-Mu transposition. New Biologist, 3, 615-625.
    • (1991) New Biologist , vol.3 , pp. 615-625
    • Falconi, M.1    McGovern, V.2    Gualerzi, C.3    Hillyard, D.4    Higgins, N.P.5
  • 14
    • 0027429067 scopus 로고
    • Expression of the gene encoding the major bacterial nucleoid protein H-NS is subject to transcriptional auto-repression
    • Falconi, M., Higgins, N.P., Spurio, R., Pon, C.L. and Gualerzi, C.O (1993) Expression of the gene encoding the major bacterial nucleoid protein H-NS is subject to transcriptional auto-repression. Mol. Microbiol., 10, 273-282.
    • (1993) Mol. Microbiol. , vol.10 , pp. 273-282
    • Falconi, M.1    Higgins, N.P.2    Spurio, R.3    Pon, C.L.4    Gualerzi, C.O.5
  • 15
    • 0026774398 scopus 로고
    • Antirepression function in Escherichia coli for the cAMP-cAMP receptor protein transcriptional activator
    • Forsman, K., Sonden, B., Goransson, M. and Uhlin, B.E. (1992) Antirepression function in Escherichia coli for the cAMP-cAMP receptor protein transcriptional activator. Proc. Natl Acad. Sci USA, 89, 9880-9884.
    • (1992) Proc. Natl Acad. Sci USA , vol.89 , pp. 9880-9884
    • Forsman, K.1    Sonden, B.2    Goransson, M.3    Uhlin, B.E.4
  • 16
    • 0025238781 scopus 로고
    • Deletion-tolerance and trans-splicing of the bacteriophage T4 td intron Analysis of the P6-L6a region
    • Galloway Salvo, J.L., Coetzee, T. and Belfort, M. (1990) Deletion-tolerance and trans-splicing of the bacteriophage T4 td intron Analysis of the P6-L6a region. J. Mol. Biol., 211, 537-549.
    • (1990) J. Mol. Biol. , vol.211 , pp. 537-549
    • Galloway Salvo, J.L.1    Coetzee, T.2    Belfort, M.3
  • 18
    • 0029163563 scopus 로고
    • RNA chaperones and the RNA folding problem
    • Herschlag, D. (1995) RNA chaperones and the RNA folding problem. J. Biol. Chem., 270, 20871-20874.
    • (1995) J. Biol. Chem. , vol.270 , pp. 20871-20874
    • Herschlag, D.1
  • 19
    • 10244250088 scopus 로고
    • Protein H-NS (H1a), chromatin structure, and gene expression
    • Eckstein, F. and Lilley, D.M.J. (eds), Springer-Verlag
    • Higgins, C.F. (1992) Protein H-NS (H1a), chromatin structure, and gene expression. In Eckstein, F. and Lilley, D.M.J. (eds), Nucleic Acids and Molecular Biology. Springer-Verlag, pp. 67-81.
    • (1992) Nucleic Acids and Molecular Biology , pp. 67-81
    • Higgins, C.F.1
  • 20
    • 0023833060 scopus 로고
    • A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli
    • Higgins, C.F., Dorman, C.J , Stirling, D.A., Waddell, L., Booth, I.R., May, G and Bremer, E. (1988) A physiological role for DNA supercoiling in the osmotic regulation of gene expression in S. typhimurium and E. coli. Cell, 52, 569-584.
    • (1988) Cell , vol.52 , pp. 569-584
    • Higgins, C.F.1    Dorman, C.J.2    Stirling, D.A.3    Waddell, L.4    Booth, I.R.5    May, G.6    Bremer, E.7
  • 21
    • 0025630517 scopus 로고
    • Protein HI: A role for chromatin structure in the regulation of bacterial gene expression and virulence?
    • Higgins, C.F., Hinton, J.C., Hulton, C S , Owen-Hughes, T., Pavitt, G D and Seirafi, A. (1990) Protein HI: a role for chromatin structure in the regulation of bacterial gene expression and virulence? Mol. Microbiol., 4, 2007-2012.
    • (1990) Mol. Microbiol. , vol.4 , pp. 2007-2012
    • Higgins, C.F.1    Hinton, J.C.2    Hulton, C.S.3    Owen-Hughes, T.4    Pavitt, G.D.5    Seirafi, A.6
  • 22
    • 0026661849 scopus 로고
    • Expression and mutational analysis of the nucleoid-associated protein H-NS of Salmonella typhimurium
    • Hinton, J.C., Santos, D.S., Seirafi, A., Hulton, C.S., Pavitt, G.D. and Higgins, C.F. (1992) Expression and mutational analysis of the nucleoid-associated protein H-NS of Salmonella typhimurium. Mol. Microbiol., 6, 2327-2337.
    • (1992) Mol. Microbiol. , vol.6 , pp. 2327-2337
    • Hinton, J.C.1    Santos, D.S.2    Seirafi, A.3    Hulton, C.S.4    Pavitt, G.D.5    Higgins, C.F.6
  • 24
  • 25
    • 0026776718 scopus 로고
    • The positive regulator CfaD overcomes the repression mediated by histone-like protein H-NS (H1) in the CFA/I fimbrial operon of Escherichia coli
    • Jordi, B.J., Dagberg, B., de Haan, L.A., Hamers, A.M., van der Zeijst, B.A., Gaastra, W. and Uhlin, B.E. (1992) The positive regulator CfaD overcomes the repression mediated by histone-like protein H-NS (H1) in the CFA/I fimbrial operon of Escherichia coli. EMBO J., 11, 2627-2632.
    • (1992) EMBO J. , vol.11 , pp. 2627-2632
    • Jordi, B.J.1    Dagberg, B.2    De Haan, L.A.3    Hamers, A.M.4    Van Der Zeijst, B.A.5    Gaastra, W.6    Uhlin, B.E.7
  • 26
    • 0027480528 scopus 로고
    • Propagation of phage Mu in IHF-deficient Escherichia coli in the absence of the H-NS histone-like protein
    • Kano, Y., Yasuzawa, K., Tanaka, H. and Imamoto, F. (1993) Propagation of phage Mu in IHF-deficient Escherichia coli in the absence of the H-NS histone-like protein. Gene, 126, 93-97.
    • (1993) Gene , vol.126 , pp. 93-97
    • Kano, Y.1    Yasuzawa, K.2    Tanaka, H.3    Imamoto, F.4
  • 27
    • 0027450801 scopus 로고
    • Gene 5 5 protein of bacteriophage T7 inhibits the nucleoid protein H-NS of Escherichia coli
    • Liu, Q and Richardson, C.C. (1993) Gene 5 5 protein of bacteriophage T7 inhibits the nucleoid protein H-NS of Escherichia coli. Proc. Natl Acad. Sci. USA, 90, 1761-1765.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 1761-1765
    • Liu, Q.1    Richardson, C.C.2
  • 28
    • 0028285269 scopus 로고
    • Interactions of the nucleoid-associated DNA-binding protein H-NS with the regulatory region of the osmotically controlled proU operon of Escherichia coli
    • Lucht, J M., Dersch, P., Kempf, B. and Bremer, E (1994) Interactions of the nucleoid-associated DNA-binding protein H-NS with the regulatory region of the osmotically controlled proU operon of Escherichia coli J. Biol. Chem., 269, 6578-6586.
    • (1994) J. Biol. Chem. , vol.269 , pp. 6578-6586
    • Lucht, J.M.1    Dersch, P.2    Kempf, B.3    Bremer, E.4
  • 29
    • 0025123398 scopus 로고
    • The osmZ (bglY) gene encodes the DNA-binding protein H-NS (H1a), a component of the Escherichia coli K12 nucleoid
    • May, G., Dersch, P., Haardt, M., Middendorf, A. and Bremer, E. (1990) The osmZ (bglY) gene encodes the DNA-binding protein H-NS (H1a), a component of the Escherichia coli K12 nucleoid. Mol. Gen. Genet , 224, 81-90.
    • (1990) Mol. Gen. Genet , vol.224 , pp. 81-90
    • May, G.1    Dersch, P.2    Haardt, M.3    Middendorf, A.4    Bremer, E.5
  • 31
    • 0016711037 scopus 로고
    • High resolution two-dimensional electrophoresis of proteins
    • O'Farrell, P.H. (1975) High resolution two-dimensional electrophoresis of proteins. J. Biol. Chem., 250, 4007-4021.
    • (1975) J. Biol. Chem. , vol.250 , pp. 4007-4021
    • O'Farrell, P.H.1
  • 32
    • 0027475041 scopus 로고
    • The RpoS sigma factor relieves H-NS-mediated transcriptional repression of csgA, the subunit gene of fibronectin-binding curli in Escherichia coli
    • Olsen, A., Arnqvist, A., Hammar, M., Sukupolvi, S. and Normark, S. (1993) The RpoS sigma factor relieves H-NS-mediated transcriptional repression of csgA, the subunit gene of fibronectin-binding curli in Escherichia coli. Mol. Microbiol., 7, 523-536.
    • (1993) Mol. Microbiol. , vol.7 , pp. 523-536
    • Olsen, A.1    Arnqvist, A.2    Hammar, M.3    Sukupolvi, S.4    Normark, S.5
  • 33
    • 0026754366 scopus 로고
    • The chromatin-associated protein H-NS interacts with curved DNA to influence DNA topology and gene expression
    • Owen-Hughes, T.A., Pavitt, G.D., Santos, D.S., Sidebotham, J.M., Hulton, C S., Hinton, J.C. and Higgins, C.F. (1992) The chromatin-associated protein H-NS interacts with curved DNA to influence DNA topology and gene expression. Cell, 71, 255-265.
    • (1992) Cell , vol.71 , pp. 255-265
    • Owen-Hughes, T.A.1    Pavitt, G.D.2    Santos, D.S.3    Sidebotham, J.M.4    Hulton, C.S.5    Hinton, J.C.6    Higgins, C.F.7
  • 34
    • 0023937157 scopus 로고
    • Identification, cloning, nucleotide sequence and chromosomal map location of hns, the structural gene for Escherichia coli DNA-binding protein H-NS
    • Pon, C L., Calogero, R A. and Gualerzi, C.O. (1988) Identification, cloning, nucleotide sequence and chromosomal map location of hns, the structural gene for Escherichia coli DNA-binding protein H-NS. Mol. Gen. Genet., 212, 199-202.
    • (1988) Mol. Gen. Genet. , vol.212 , pp. 199-202
    • Pon, C.L.1    Calogero, R.A.2    Gualerzi, C.O.3
  • 36
    • 0027999823 scopus 로고
    • Plasmids bearing hfq and the hns-like gene stpA complement hns mutants in modulating arginine decarboxylase gene expression in Escherichia coli
    • Shi, X. and Bennett, G.N. (1994) Plasmids bearing hfq and the hns-like gene stpA complement hns mutants in modulating arginine decarboxylase gene expression in Escherichia coli J. Bacteriol., 176, 6769-6775.
    • (1994) J. Bacteriol. , vol.176 , pp. 6769-6775
    • Shi, X.1    Bennett, G.N.2
  • 37
    • 0028957883 scopus 로고
    • A small RNA acts as an antisilencer of the H-NS-silenced rcsA gene of Escherichia coli
    • Sledjeski, D. and Gottesman, S. (1995) A small RNA acts as an antisilencer of the H-NS-silenced rcsA gene of Escherichia coli. Proc. Natl Acad Sci. USA, 92, 2003-2007.
    • (1995) Proc. Natl Acad Sci. USA , vol.92 , pp. 2003-2007
    • Sledjeski, D.1    Gottesman, S.2
  • 38
    • 0021760528 scopus 로고
    • H1a, an E. coli DNA-binding protein which accumulates in stationary phase, strongly compacts DNA in vitro
    • Spassky, A., Rimsky, S., Garreau, H. and Buc, H. (1984) H1a, an E. coli DNA-binding protein which accumulates in stationary phase, strongly compacts DNA in vitro. Nucleic Acids Res., 12, 5321-5340.
    • (1984) Nucleic Acids Res. , vol.12 , pp. 5321-5340
    • Spassky, A.1    Rimsky, S.2    Garreau, H.3    Buc, H.4
  • 41
    • 0027408394 scopus 로고
    • The Escherichia coli nucleoid protein H-NS functions directly as a transcriptional repressor
    • Ueguchi, C. and Mizuno, T. (1993) The Escherichia coli nucleoid protein H-NS functions directly as a transcriptional repressor. EMBO J., 12, 1039-1046.
    • (1993) EMBO J. , vol.12 , pp. 1039-1046
    • Ueguchi, C.1    Mizuno, T.2
  • 42
    • 0027500211 scopus 로고
    • Autoregulatory expression of the Escherichia coli hns gene encoding a nucleoid protein: H-NS functions as a repressor of its own transcription
    • Ueguchi, C., Kakeda, M. and Mizuno, T. (1993) Autoregulatory expression of the Escherichia coli hns gene encoding a nucleoid protein: H-NS functions as a repressor of its own transcription. Mol. Gen. Genet., 236, 171-178.
    • (1993) Mol. Gen. Genet. , vol.236 , pp. 171-178
    • Ueguchi, C.1    Kakeda, M.2    Mizuno, T.3
  • 44
    • 0025003429 scopus 로고
    • An Escherichia coli protein that preferentially binds to sharply curved DNA
    • Yamada, H., Muramatsu, S. and Mizuno, T. (1990) An Escherichia coli protein that preferentially binds to sharply curved DNA. J. Biochem. (Tokyo), 108, 420-425.
    • (1990) J. Biochem. (Tokyo) , vol.108 , pp. 420-425
    • Yamada, H.1    Muramatsu, S.2    Mizuno, T.3
  • 45
    • 0026250129 scopus 로고
    • Molecular analysis of the Escherichia coli hns gene encoding a DNA-binding protein, which preferentially recognizes curved DNA sequences
    • Yamada, H., Yoshida, T., Tanaka, K., Sasakawa, C. and Mizuno, T. (1991) Molecular analysis of the Escherichia coli hns gene encoding a DNA-binding protein, which preferentially recognizes curved DNA sequences. Mol. Gen. Genet., 230, 332-336.
    • (1991) Mol. Gen. Genet. , vol.230 , pp. 332-336
    • Yamada, H.1    Yoshida, T.2    Tanaka, K.3    Sasakawa, C.4    Mizuno, T.5
  • 46
    • 0027447019 scopus 로고
    • Function of the Escherichia coli nucleoid protein. H-NS: Molecular analysis of a subset of proteins whose expression is enhanced in a hns deletion mutant
    • Yoshida, T., Ueguchi, C., Yamada, H. and Mizuno, T. (1993) Function of the Escherichia coli nucleoid protein. H-NS: molecular analysis of a subset of proteins whose expression is enhanced in a hns deletion mutant. Mol. Gen. Genet., 237, 113-122.
    • (1993) Mol. Gen. Genet. , vol.237 , pp. 113-122
    • Yoshida, T.1    Ueguchi, C.2    Yamada, H.3    Mizuno, T.4
  • 47
    • 0027073133 scopus 로고
    • Nucleotide sequence of a newly-identified Escherichia coli gene, stpA, encoding an H-NS-like protein
    • Zhang, A. and Belfort, M. (1992) Nucleotide sequence of a newly-identified Escherichia coli gene, stpA, encoding an H-NS-like protein. Nucleic Acids Res., 20, 6735.
    • (1992) Nucleic Acids Res. , vol.20 , pp. 6735
    • Zhang, A.1    Belfort, M.2
  • 48
    • 0029384106 scopus 로고
    • E. coli protein StpA stimulates self-splicing by promoting RNA assembly in vitro
    • Zhang, A., Derbyshire, V., Galloway Salvo, J.L. and Belfort, M. (1995) E. coli protein StpA stimulates self-splicing by promoting RNA assembly in vitro. RNA, 1, 783-793.
    • (1995) RNA , vol.1 , pp. 783-793
    • Zhang, A.1    Derbyshire, V.2    Galloway Salvo, J.L.3    Belfort, M.4
  • 49
    • 0028234761 scopus 로고
    • Modulated expression of promoters containing upstream curved DNA sequences by the Escherichia coli nucleoid protein H-NS
    • Zuber, F., Kotlarz, D., Rimsky, S. and Buc, H. (1994) Modulated expression of promoters containing upstream curved DNA sequences by the Escherichia coli nucleoid protein H-NS. Mol. Microbiol., 12, 231-240.
    • (1994) Mol. Microbiol. , vol.12 , pp. 231-240
    • Zuber, F.1    Kotlarz, D.2    Rimsky, S.3    Buc, H.4


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