The role of peptide modules in protein evolution

Biophysical Chemistry

Volumn 66, Issue 2-3, 1997, Pages 203-210

  Fuchs, Merle A ^a   Buta, Christiane ^a  

^a MAX PLANCK INSTITUTE FOR BIOPHYSICAL CHEMISTRY   (Germany)

Author keywords

Applied molecular evolution; Protein design; Protein evolution

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; DRUG DESIGN; EVOLUTION; PRIORITY JOURNAL; PROTEIN SYNTHESIS; REACTION ANALYSIS; TECHNIQUE; THEORY;

EID: 0030823254     PISSN: 03014622     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0301-4622(97)00067-7     Document Type: Article

References (58)

1. C.D. Darwin, On the origin of species by means of natural selection, or the preservation of favoured races in the struggle for life. (J. Murray, London, 1859).
2. M. Eigen, Stufen zum Leben (R. Piper-Verlag, München, 1987).
3. R.W. Hamming, Bell Syst. Techn. J., 24 (1950) 147-160.
4. I. Rechenberg, Evolutionsstrategie (Problemata Frommann-Holzboog, Stuttgart - Bad Cannstatt, 1973).
5. M. Eigen, J.S. McCaskill and P. Schuster, Adv. Chem. Phys., 75 (1987) 149-263.
6. S. Brakmann, U. Kettling and F. Oehlenschläger, Biologie in unserer Zeit, 25 (1995) 355-366
7. A.M. Lesk and C. Chothia, J. Mol. Biol., 160 (1982) 325.
8. M.J. Geisow, TIBTECH, 11 (1993) 111-114.
9. P. Schuster, Orig. Life Evol. Biosys., 23 (1993) 373-391.
10. P. Schuster, W. Fontana, P.F. Stadler and I.L. Hofacker, Proc. R. Soc. Lond. B., 255 (1994) 279-284.
11. A.D. Ellington and J.W. Szostak, Nature, 346 (1990) 818-822.
12. S.M. Edgington, Bio/Technology, 11 (1993) 285-289.
13. G. Shaw, BioEssays, 18 (1996) 35-46.
14. R.F. Doolittle and P. Bork, Sci. American, 269 (1993) 44-40.
15. M.G. Rossmann, D. Moras and K.W. Olsen, Nature, 250 (1974) 194-199.
16. M.G. Rossmann, A. Liljas, C.I. Brandén and L.J. Banaszak, Enzymes, 11A (1975) 61-102.
17. C.I. Brandén, H. Eklund, C. Cambillau and A.J. Pryor, Experientia Supplementum, 36 (1980) 40-84.
18. I. Ohlsson, B. Nordström and C.I. Brandén, J. Mol. Biol., 89 (1974) 339-354.
19. C.I. Brandén and J. Tooze, Introduction to protein structure (Garland Publishing Inc., New York, 1991).
20. S. Clermont, C. Corbier, Y. Mely, D. Gerard, A. Wonacott and G. Branlant, Biochemistry, 32 (1993) 10178-10184.
21. C.I. Brandén, H. Eklund, C. Cambillau and A.J. Pryor, EMBO Journal, 3 (1984) 1307-1310.
22. M. Go and M. Mizutani, in: The origin and evolution of the cell, eds. H. Hartmann and K. Matsuno (World Scientific, Singapore, 1992) 359-374
23. T. Pawson, Nature, 373 (1995) 573-580.
24. I.D. Campbell and A.K. Dowing, TIBTECH, 12 (1994) 168-172.
25. W. Gilbert, Nature, 271 (1978) 501-501.
26. C.C.F. Blake, Nature, 273 (1978) 267-268.
27. C. Blake, Nature, 306 (1983) 535-537.
28. W. Gilbert and M. Glynais, Gene, 135 (1993) 137-144.
29. R.F. Doolittle, Annu. Rev. Biochem., 64 (1995) 287-314.
30. T. Cavalier-Smith, Nature, 315 (1985) 283-284.
31. J.D. Palmer and J.M. Logson Jr., Curr. Opin. Gen. Devel., 1 (1991) 470-477.
32. J.M. Logsdon and J.D. Palmer, Nature, 369 (1994) 526.
33. G.N. Kumar, Curr. Sci., 66 (1994) 336-339.
34. L. Patthy, Curr. Opin. Struct. Biol., 1 (1991) 351-361.
35. D.G. Hardie and J.R. Coggins, Multidomain proteins - structure and evolution. (Elsevier, Amsterdam, 1986) p. 2.
36. A.R. Panchenko, Z. Luthey-Schulten and P.G. Wolynes, Proc. Natl. Acad. Sci. USA, 93 (1996) 2008-2013.
37. M. Go, Proc. Natl. Acad. Sci. USA, 80 (1983) 1964-1968.
38. M. Baron, D.G. Norman and I.D. Campbell, TIBS, 16 (1991) 13-17.
39. J.J. Devlin, L.C. Panganiban and P.E. Devlin, Science, 249 (1990) 404-406.
40. J.K. Scott, TIBS, 17 (1992) 241-245.
41. D. Irvine, C. Tuerk and L. Gold, J. Mol. Biol., 222 (1991) 739-761.
42. R.A. Houghten, J.R. Appel, S.E. Blondell, J.H. Cuervo, C.T. Dooley and C. Pinilla, BioTechniques, 13 (1992) 412-421.
43. L.H. Caporale, Proc. Natl. Acad. Sci USA, 92 (1995) 75-82.
44. M.H.J. Ohlmeyer, R.N. Swanson, L.W. Dillard, J.C. Reader, G. Asouline, R. Kobayashi, M. Wigler and W.C. Still, Proc. Natl. Acad. Sci. USA, 90 (1993) 10922-10926.
45. R.C. Cadwell and G. Joyce, PCR Meth. Appl., 1 (1992) 1-6.
46. R.C. Cadwell and G. Joyce, PCR Meth. Appl., 3 (1994) 136-140.
47. S. Delagrave, E.R. Goldmann and D.C. Youvan, Prot. Eng., 6 (1993) 327-331.
48. B. Borrego, A. Wienecke and A. Schwienhorst, Nucl. Acids Res. USA, 23 (1995) 1834-1835.
49. S. Delagrave and D.C. Youvan, Bio/Technology, 11 (1993) 1548-1552.
50. W.P. Stemmer, Nature, 370 (1994) 389-391.
51. A. Sättler, S. Kanka, K.H. Maurer and D. Riesner, Electrophoresis, 17 (1996) 784-92.
52. W.P. Stemmer, Bio/Technology, 13 (1995) 549-553.
53. C.F. Barbas, W. Amberg, A. Simoncsits, T.M. Jones and R.A. Lerner, Gene, 137 (1993) 57-62.
54. R.A. Lerner, S.J. Benkovic and P.G. Schultz, Science, 252 (1991) 659-667.
55. W.P. Stemmer, Proc. Natl. Acad. Sci. USA, 91 (1994) 10747-10751.
56. A. Crameri, E.A. Whitehorn, E. Tate and W.P.C. Stemmer, Nature Biotech., 14 (1996) 315-319.
57. W. Mandecki, Prot. Eng., 3 (1990) 221-226.
58. S. Brenner and R.A. Lerner, Proc. Natl. Acad. Sci. USA, 89 (1992) 5381-5383.