Equimolar generation of the four possible arrangements of adjacent L components in herpes simplex virus type 1 replicative intermediates

Journal of Virology

Volumn 71, Issue 10, 1997, Pages 7736-7743

  Bataille, Dominique ^a   Epstein, Alberto L ^a  

^a CENTRE DE GÉNÉTIQUE MOLÉCULAIRE ET CELLULAIRE   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; DNA DETERMINATION; GENE SEQUENCE; HERPES SIMPLEX VIRUS 1; NONHUMAN; PLASMID; PRIORITY JOURNAL; VIRUS GENOME; VIRUS MUTANT; VIRUS REPLICATION;

EID: 0030820357     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/jvi.71.10.7736-7743.1997     Document Type: Article

References (53)

1. Bataille, D., and A. Epstein. 1994. Herpes simplex virus replicative concatemers contain L components in inverted orientation. Virology 203:384-388.
2. Belanger, K., C. Mirzayan, H. Kreuzer, B. Alberts, and K. Kreuzer. 1996. Two-dimensional gel analysis of rolling circle replication in the presence and absence of bacteriophage T4 primase. Nucleic Acids Res. 24:2166-2175.
3. Ben Porat, T., and S. Tokzewski. 1977. Replication of herpesvirus DNA. II. Sedimentation characteristics of newly-synthesized DNA. Virology 79:292-301.
4. Berthomme, H., S. Monahan, D. Parris, B. Jacquemont, and A. Epstein. 1995. Cloning, sequencing, and functional characterization of the two subunits of the pseudorabies virus DNA polymerase holoenzyme: evidence for specificity of interaction. J. Virol. 69:2811-2818.
5. Bierne, H., and B. Michel. 1994. When replication forks stop. Mol. Microbiol. 13:17-23.
6. Bloss, T., and B. Sugden. 1994. Optimal lengths for DNAs encapsidated by Epstein-Barr virus. J. Virol. 68:8217-8222.
7. Carpenter, L., and P. Englund. 1995. Kinetoplast maxicircle DNA replication in Crithidia fasciculata and Trypanosoma brucei. Mol. Cell. Biol. 15: 6794-6803.
8. Deiss, L., and N. Frankel. 1986. Herpes simplex virus amplicon: cleavage of concatemeric DNA is linked to packaging and involves amplification of the terminally reiterated a sequence. J. Virol. 57:933-941.
9. Delius, H., and J. Clements. 1976. A partial denaturation map of herpes simplex virus type 1 DNA: evidence for inversions of the unique DNA regions. J. Gen. Virol. 33:125-133.
10. Deshmane, S. L., B. Raengsakulrach, J. F. Berson, and N. W. Fraser. 1995. The replication intermediates of herpes simplex virus type 1 DNA are relatively short. J. Neuro Virol. 1:165-176.
11. Drocourt, D., T. Calmels, J. P. Reynes, J. P. Baron, and G. Tiraby. 1990. Cassettes of the Streptoalloteichus hindustanus ble gene for transformation of lower and higher eukaryotes to phleomycin resistance. Nucleic Acids Res. 18:4009-4012.
12. Dutch, R., V. Bianchi, and I. Lehman. 1995. Herpes simplex virus type 1 DNA replication is specifically required for high-frequency homologous recombination between repeated sequences. J. Virol. 69:3084-3089.
13. Dutch, R., R. Bruckner, E. Mocarski, and I. Lehman. 1992. Herpes simplex virus type 1 recombination: role of DNA replication and viral a sequences. J. Virol. 66:277-285.
14. C-DR1 region is required for high-level a-sequence-mediated recombination. J. Virol. 68:3733-3741.
15. Ecker, J., and R. Hyman. 1981. Analysis of interruptions in the phosphodiester backbone of herpes simplex virus DNA. Virology 110:213-216.
16. Frenkel, N. 1981. Defective interfering herpesviruses, p. 91-120. In A. J. Namias, W. R. Dowdle, and R. S. Aschinazi (ed.). The human herpesviruses - an interdisciplinary perspective. Elsevier, New York, N.Y.
17. Garber, D., S. Beverley, and D. Coen. 1993. Demonstration of circularization of herpes simplex virus DNA following infection using pulsed-field gel electrophoresis. Virology 197:459-462.
18. Hayward, G., R. Jacob, S. Wadsworth, and B. Roizman. 1975. Anatomy of herpes simplex virus DNA: evidence for four populations of molecules that differ in the relative orientations of their long and short segments. Proc. Natl. Acad. Sci. USA 72:4243-4247.
19. Heine, M., R. Honess, E. Cassai, and B. Roizman. 1974. Proteins specified by herpes simplex virus. XII. The virion polypeptides of type 1 strains. J. Virol. 14:640-651.
20. Jacob, R., L. Morse, and B. Roizman. 1979. Anatomy of herpes simplex virus DNA. XIII. Accumulation of head-to-tail concatemers in nuclei of infected cells and their role in the generation of the four isomeric arrangements J viral DNA. J. Virol. 29:448-457.
21. Jenkins, F., and B. Roizman. 1986. Herpes simplex virus 1 recombinants with noninverting genomes frozen in different isomeric arrangements are capably of independent replication. J. Virol. 59:494-499.
22. Lamberti, C., and S. Weller. 1996. The herpes simplex virus type 1 UL6 protein is essential for cleavage packaging but not for genomic inversioin. Virology 226:403-407.
23. Lowenstein, P., S. Fournel, D. Bain, P. Clissold, M. Castro, and A. Epstein, 1994. Herpes simplex virus 1 (HSV1) helper co-infection affects the distribution of an amplicon encoded protein in glia. NeuroReport 5:1625-1630.
24. Martin, D., and P. Weber, 1996. The a sequence is dispensable for isomerization of the herpes simplex virus type 1 genome. J. Virol. 70:8801-8812.
25. Martinez, R., R. T. Sarisky, P. C. Weber, and S. K. Weller. 1996. Herpes simplex virus type 1 alkaline nuclease is required for efficient processing of viral DNA replication intermediates. J. Virol. 70:2075-2085.
26. McCarthy, A., L. McMahan, and P. Schaffer. 1989. Herpes simplex virus type 1 ICP27 deletion mutants exhibit altered patterns of transcription and are DNA deficient. J. Virol. 63:18-27.
27. Mezzina, M., C. Menck, P. Courtin, and A. Sarazin. 1988. Replication of simian virus 40 DNA after UV irradiation: evidence of growing fork blockage and single-stranded gaps in daughter strands. J. Virol. 62:4249-4258.
28. Poffenberger, K., and B. Roizman. 1985. A noninverting genome of a viable herpes simplex virus 1: presence of head-to-tail linkages in packaged genomes and requirements for circularization after infection. J. Virol. 53:587-595.
29. Poffenberger, K., E. Tabares, and B. Roizman. 1983. Characterization of a viable, noninverting herpes simplex virus 1 genome derived by insertion and deletion of sequences at the junction of components L and S. Proc. Natl. Acad. Sci. USA 80:2690-2694.
30. Rice, S., and D. Knipe. 1990. Genetic evidence for two distinct transactivation functions of the herpes simplex virus alpha protein ICP27. J. Virol. 64:1704-1715.
31. Rice, S., L. Su, and D. Knipe. 1989, Herpes simplex virus alpha protein ICP27 possesses separable positive and negative regulatory activities. J. Virol. 63:3399-3407.
32. Sacks, W., C. Greene, D. Ashman, and P. Schaffer. 1985. Herpes simplex virus type 1 ICP27 is an essential regulatory protein. J. Virol. 55:796-805.
33. Sarisky, R., and P. Weber. 1994. Requirement for double-strand breaks but not for specific DNA sequences in herpes simplex virus type 1 genome, isomerization events. J. Virol. 68:34-47.
34. Severini, A., A. Morgan, D. Tovell, and L. Tyrell. 1994. Study of the structure of replicative intermediates of HSV-1 DNA by pulsed-field gel electrophoresis. Virology 200:428-435.
35. Severini, A., D. Scraba, and D. Tyrrell. 1996. Branched structures in the intracellular DNA of herpes simplex virus type 1. J. Virol. 70:3169-3175.
36. Sheldrick, P., and N. Berthelot. 1975. Inverted repetitions in the chromosome of herpes simplex virus. Cold Spring Harbor Symp. Quant. Biol. 39: 667-678.
37. Skaliter, R., and I. Lehman. 1994. Rolling circle DNA replication in vitro by a complex of herpes simplex virus type 1-encoded enzymes, Proc. Natl. Acad. Sci. USA 91:10665-10669.
38. Skaliter, R., A. Makhov, J. Griffith, and I. Lehman. 1996. Rolling-circk DNA replication by extracts of herpes simplex virus type 1-infected human cells, J. Virol. 70:1132-1136.
39. Smiley, J., J. Duncan, and M. Howes, 1990. Sequence requirements for DNA rearrangements induced by the terminal repeat of herpes simplex virus type 1 KOS DNA. J. Virol. 64:5036-5050.
40. Smith, I., M. Hardwicke, and R. Sandri-Goldin. 1992. Evidence that the herpes simplex virus immediate early protein ICP27 acts post-transcriptionally during infection to regulate gene expression. Virology 186:74-86.
41. Spaete, R., and N. Frenkel. 1982. The herpes simplex virus amplicon: a new eucaryotic defective-virus cloning-amplifying vector. Cell 30:295-304.
42. Stow, N., and E. McMonagle. 1983. Characterization of the TRs/IRs original of DNA replication. Virology 130:427-438.
43. Svoboda, D., and J. Vos. 1995. Differential replication of a single, UV-induced lesion in the leading or lagging strand by the human cell extract: for uncoupling or gap formation. Proc. Natl. Acad. Sci. USA 92:11975-11979.
44. Uprichard, S., and D. Knipe. 1996. Herpes simplex ICP27 mutant viruses exhibit reduced expression of specific DNA replication genes. J. Virol. 70 1969-1980.
45. Vlazny, D., and N. Frenkel. 1981. Replication of herpes simplex virus DNA localization of replication recognition signals within defective virus genome Proc. Natl. Acad. Sci. USA 78:742-746.
46. Wadsworth, S., R. Jacob, and B. Roizman. 1975. Anatomy of herpes simpl virus DNA. II. Size, composition, and arrangement of inverted terminal repetitions. J. Virol. 15:1484-1497.
47. Weber, P., M. Challberg, N. Nelson, M. Levine, and J. Glorioso. 1988. Inversion events in the HSV-1 genome are directly mediated by the viral DNA replication machinery and lack sequence specificity. Cell 54:369-381.
48. Weber, P., M. Levine, and J. Glorioso. 1990. Recombinogenic properties of herpes simplex virus type 1 DNA sequences resident in simian virus 40 minichromosomes. J. Virol. 64:300-306.
49. Weller, S., A. Sparado, J. Schaffer, A. Murray, A. Maxam, and P. Schaffer. 1985. Cloning, sequencing, and functional analysis of oriL, a herpes simplex virus type 1 origin of DNA synthesis. Mol. Cell. Biol. 5:930-942.
50. Wohlrab, F., S. Chatterjee, and R. Wells. 1991. The herpes simplex virus segment inversion site is specifically cleaved by a virus-induced nuclear endonuclease. Proc. Natl. Acad. Sci. USA 88:6432-6436.
51. Wohlrab, F., M. MacLean, and R. Wells. 1987. The segment inversion site of herpes simplex virus type 1 adopts a novel DNA structure. J. Biol. Chem. 262:6407-6416.
52. Wohlrab, F., and R. Wells. 1989. Slight changes in conditions influence the family of non-B-DNA conformations of the herpes simplex virus type 1 DR2 repeats. J. Biol. Chem. 264:8207-8213.
53. Zhang, X., S. Efstathiou, and A. Simmons. 1994. Identification of novel herpes simplex virus replicative intermediates by field inversion gel electrophoresis: implications for viral DNA amplification strategies. Virology 202: 530-539.