An empirical correlation between amide deuterium isotope effects on 13C(α) chemical shifts and protein backbone conformation

Journal of the American Chemical Society

Volumn 119, Issue 34, 1997, Pages 8070-8075

  Ottiger, Marcel ^a   Bax, Ad ^a  

^a NATIONAL INSTITUTE OF DIABETES AND DIGESTIVE AND KIDNEY DISEASES   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; HYDROGEN BOND; MEASUREMENT; PROTEIN CONFORMATION; PROTEIN STRUCTURE; PROTON NUCLEAR MAGNETIC RESONANCE;

EID: 0030758958     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja9707466     Document Type: Article

References (50)

1. Feeney, J.; Partington, P.; Roberts, G. C. K. J. Magn. Reson. 1974, 13, 268-274. Hawkes, G. E.; Randall, E. W.; Hull, W. E.; Gattegno, D.; Conti, F. Biochemistry 1978, 17, 3986-3992.
2. Feeney, J.; Partington, P.; Roberts, G. C. K. J. Magn. Reson. 1974, 13, 268-274. Hawkes, G. E.; Randall, E. W.; Hull, W. E.; Gattegno, D.; Conti, F. Biochemistry 1978, 17, 3986-3992.
3. Wehrli, F. W.; Wirthlin, T. Interpretation of Carbon-13 NMR Spectra; Heyden: London, 1976.
4. Majerski, Z.; Zuanic, M.; Metelko, B. J. Am. Chem. Soc. 1985, 107, 1721-1726.
5. Reuben, J. J. Am. Chem. Soc. 1985, 107, 1747-1755 and references therein.
6. Yashiro, M.; Shigenobu, Y.; Yoshikawa, S. J. Am. Chem. Soc. 1986, 108, 1096-1097.
7. Henry, G. D.; Weiner, J. H.; Sykes, B. D. Biochemistry 1987, 26, 3626-3634.
8. Hansen, P. E. Prog. NMR Spectrosc. 1988, 20, 207-255.
9. Tüchsen, E.; Hansen, P. E. Biochemistry 1988, 27, 8568-8576.
10. Aydin, R.; Frankmölle, W.; Schmalz, D.; Günther, H. Magn. Reson. Chem. 1988, 26, 408-411.
11. Berger, S. In NMR, Basic Principles and Progress; Günther, H., Ed.; Springer: Berlin, 1990; Vol. 22, pp 2-28.
12. Tüchsen, E.; Hansen, P. E. Int. J. Biol. Macromol. 1991, 13, 2-8.
13. Hansen, P. E.; Kolonicny, A.; Lycka, A. Magn. Reson. Chem. 1992, 30, 786-795.
14. LeMaster, D. M.; LaIuppa, J. C.; Kushlan, D. M., J. Biomol. NMR 1994, 4, 863-870.
15. Otter, A.; Liu, X.; Kotovych, G. J. Magn. Reson. 1990, 86, 657-662.
16. Kainosho, M.; Nagao, H.; Tsuji, T. Biochemistry 1987, 26, 1068-1075.
17. Henry, G. D.; Weiner, J. H.; Sykes, B. D. Biochemistry 1987, 26, 3626-3634.
18. Grzesiek, S.; Anglister, J.; Ren, H.; Bax, A. J. Am. Chem. Soc. 1993, 115, 4369-4370.
19. Shan, X.; Gardner, K. H.; Muhandiram, D. R.; Rao, N. S.; Arrowsmith, C. H.; Kay, L. E. J. Am. Chem. Soc. 1996, 118, 6570-6579.
20. Smith, B. O.; Ito, Y.; Raine, A.; Techmann, S.; Ben-Tovim, L.; Nietlispach, D.; Broadhurst, R. W.; Terada, T.; Kelly, M.; Oschkinat, H.; Shibata, T.; Yokoyama, S.; Laue, E. D. J. Biomol. NMR 1996, 8, 360-368.
21. Farmer II, B. T.; Venters, R. A. J. Am. Chem. Soc. 1995, 117, 4187-4188.
22. Venters, R. A.; Farmer II, B. T.; Fierke, C. A.; Spicer, L. D. J. Mol. Biol. 1996, 264, 1101-1116.
23. Garrett, D. S.; Seok, Y.-J.; Lee, B. R., Gronenborn; A. M.; Clore, G. M. Biochemistry 1997, 36, 861-872.
24. Vijay-Kumar, S.; Bugg, C. E.; Cook, W. J. J. Mol. Biol. 1987, 194, 531-544.
25. Delaglio, F.; Grzesiek, S.; Vuister, G. W.; Zhu, G.; Pfeifer, J.; Bax, A. J. Biomol. NMR 1995, 6, 277-293.
26. Garret, D. S.; Powers, R.; Gronenborn, A. M.; Clore, G. M. J. Magn. Reson. 1991, 95, 214-220.
27. Wang, A. C.; Bax, A. J. Am. Chem. Soc. 1996, 118, 2483-2494.
28. Wang, A. C.; Grzesiek, S.; Tschudin, R.; Lodi, P. J.; Bax, A. J. Biomol. NMR 1995, 5, 376-382.
29. Palmer III, A. G.; Cavanagh, J.; Wright, P. E.; Rance, M. J. Magn. Reson. 1991, 93, 151-170.
30. Kay, L. E.; Keifer, P.; Saarinen, T. J. Am. Chem. Soc. 1992, 114, 10663-10665.
31. Zhu, G.; Bax, A. J. Magn. Reson. 1990, 90, 405-410.
32. Griesinger, C.; Sørensen, O. W.; Ernst, R. R. J. Am. Chem. Soc. 1985, 107, 6394-6396.
33. Montelione, G. T.; Winkler, M. E.; Rauenbuehler, P.; Wagner, G. J. Magn. Reson. 1989, 82, 198-204.
34. Biamonti, C.; Rios, C. B.; Lyons, B. A.; Montelione, G. T. Adv. Biophys. Chem. 1994, 4, 51-120.
35. Eberstadt, M.; Gemmecker, G.; Mierke, D. F.; Kessler, H. Angew. Chem., Int. Ed. Engl. 1995, 34, 1671-1695.
36. Delaglio, F.; Torchia, D. A.; Bax, A. J. Biomol. NMR. 1991, 1, 439-446.
37. LiWang, A. C.; Bax, A. J. Am. Chem. Soc. 1996, 118, 12864-12865.
38. Wagner, G.; Pardi, A.; Wüthrich, K. J. Am. Chem. Soc. 1983, 105, 5948-5949.
39. MacArthur, M. W.; Thornton, J. M. J. Mol. Biol. 1996, 264, 1180-1195.
40. Hu, J.-S.; Bax, A. J. Am. Chem. Soc. In press.
41. Wishart, D. S.; Sykes, B. D.; Richards, F. M. J. Mol. Biol. 1991, 222, 311-333.
42. Spera, S.; Bax, A. J. Am. Chem. Soc. 1991, 113, 5490-5492.
43. Wüthrich, K. NMR of Proteins and Nucleic Acids; Wiley: New York, 1986.
44. Pardi, A.; Billeter, M.; Wüthrich, K. J. Mol. Biol. 1984, 180, 741-751.
45. Vuister, G. W.; Delaglio, F.; Bax, A. J. Am. Chem. Soc. 1992, 114, 9674-9675.
46. Brünger, A. T. X-PLOR Version 3.1: A System for X-ray Crystallography and NMR; Yale University Press: New Haven, CT, 1992.
47. Garrett, D. S.; Kuszewski, J.; Hancock, T. J.; Lodi, P. J.; Vuister, G. W.; Gronenborn, A. M.; Clore, G. M. J. Magn. Reson. B. 1994, 104, 99-103.
48. Wang, A. C.; Bax, A. J. Am. Chem. Soc. 1995, 117, 1810-1813.
49. Tjandra, N.; Feller, S. E.; Pastor, R. W.; Bax, A. J. Am. Chem. Soc. 1995, 117, 12562-12566.
50. Koradi, R.; Billeter, M.; Wüthrich, K. J. Mol. Graphics 1996, 14, 52-55.