-
1
-
-
0029663960
-
Community analysis of the bacterial assemblages in the winter cover and pelagic layers of a high-mountain lake by in situ hybridization
-
Alfreider, A., J. Pernthaler, R. Amann, B. Sattler, F. O. Glöckner, A. Wille, and R. Psenner. 1996. Community analysis of the bacterial assemblages in the winter cover and pelagic layers of a high-mountain lake by in situ hybridization. Appl. Environ. Microbiol. 62:2138-2144.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 2138-2144
-
-
Alfreider, A.1
Pernthaler, J.2
Amann, R.3
Sattler, B.4
Glöckner, F.O.5
Wille, A.6
Psenner, R.7
-
2
-
-
0025099312
-
Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology
-
Amann, R. I., L. Krumholz, and D. A. Stahl. 1990. Fluorescent-oligonucleotide probing of whole cells for determinative, phylogenetic, and environmental studies in microbiology. J. Bacteriol. 172:762-770.
-
(1990)
J. Bacteriol.
, vol.172
, pp. 762-770
-
-
Amann, R.I.1
Krumholz, L.2
Stahl, D.A.3
-
3
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
Amann, R. I., W. Ludwig, and K.-H. Schleifer. 1995. Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol. Rev. 59:143-169.
-
(1995)
Microbiol. Rev.
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.-H.3
-
4
-
-
0027050681
-
Development of a rapid method for detecting bacterial cells in situ using 16S rRNA-targeted probes
-
Braun-Howland, E. B., S. A. Danielsen, and S. A. Nierzwicki-Bauer. 1992. Development of a rapid method for detecting bacterial cells in situ using 16S rRNA-targeted probes. BioTechniques 13:928-932.
-
(1992)
BioTechniques
, vol.13
, pp. 928-932
-
-
Braun-Howland, E.B.1
Danielsen, S.A.2
Nierzwicki-Bauer, S.A.3
-
5
-
-
0030462076
-
Relation between presence/ absence of a visible nucleoid and metabolic activity in bacterioplankton cells
-
Choi, J. W., E. B. Sherr, and B. F. Sherr. 1996. Relation between presence/ absence of a visible nucleoid and metabolic activity in bacterioplankton cells. Limnol. Oceanogr. 41:1161-1168.
-
(1996)
Limnol. Oceanogr.
, vol.41
, pp. 1161-1168
-
-
Choi, J.W.1
Sherr, E.B.2
Sherr, B.F.3
-
6
-
-
0024507744
-
Phylogenetic stains: Ribosomal RNA-based probes for the identification of single cells
-
DeLong, E. F., G. S. Wickham, and N. R. Pace. 1989. Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells. Science 243:1360-1363.
-
(1989)
Science
, vol.243
, pp. 1360-1363
-
-
DeLong, E.F.1
Wickham, G.S.2
Pace, N.R.3
-
7
-
-
0002274724
-
Microautoradiography-based enumeration of bacteria with estimates of thymidine-specific growth and production rates
-
Douglas, D. J., J. A. Novitsky, and R. O. Fournier. 1987. Microautoradiography-based enumeration of bacteria with estimates of thymidine-specific growth and production rates. Mar. Ecol. Prog. Ser. 36:91-99.
-
(1987)
Mar. Ecol. Prog. Ser.
, vol.36
, pp. 91-99
-
-
Douglas, D.J.1
Novitsky, J.A.2
Fournier, R.O.3
-
8
-
-
34250228655
-
Thymidine incorporation as a measure of heterotrophic bacterioplankton production in marine surface waters: Evaluation and field results
-
Fuhrman, J. A., and F. Azam. 1982. Thymidine incorporation as a measure of heterotrophic bacterioplankton production in marine surface waters: evaluation and field results. Mar. Biol. 66:109-120.
-
(1982)
Mar. Biol.
, vol.66
, pp. 109-120
-
-
Fuhrman, J.A.1
Azam, F.2
-
9
-
-
0001992490
-
Biological considerations in the measurement of dissolved free amino acids in seawater and implications for chemical and microbiological studies
-
Fuhrman, J. A., and T. M. Bell. 1985. Biological considerations in the measurement of dissolved free amino acids in seawater and implications for chemical and microbiological studies. Mar. Ecol. Prog. Ser. 25:13-21.
-
(1985)
Mar. Ecol. Prog. Ser.
, vol.25
, pp. 13-21
-
-
Fuhrman, J.A.1
Bell, T.M.2
-
10
-
-
0000467183
-
Characterization of marine prokaryotic communities via DNA and RNA
-
Fuhrman, J. A., S. H. Lee, Y. Masuchi, A. A. Davis, and R. M. Wilcox. 1994. Characterization of marine prokaryotic communities via DNA and RNA. Microb. Ecol. 28:133-145.
-
(1994)
Microb. Ecol.
, vol.28
, pp. 133-145
-
-
Fuhrman, J.A.1
Lee, S.H.2
Masuchi, Y.3
Davis, A.A.4
Wilcox, R.M.5
-
11
-
-
0023958997
-
Phylogenetic group-specific oligodeoxynucleotide probes for identification of single microbial cells
-
Giovannoni, S. J., E. F. DeLong, G. J. Olsen, and N. R. Pace. 1988. Phylogenetic group-specific oligodeoxynucleotide probes for identification of single microbial cells. J. Bacteriol. 170:720-726.
-
(1988)
J. Bacteriol.
, vol.170
, pp. 720-726
-
-
Giovannoni, S.J.1
DeLong, E.F.2
Olsen, G.J.3
Pace, N.R.4
-
12
-
-
0026762659
-
Dual staining of natural bacterioplankton with 4′,6-diamidino-2-phenylindole and fluorescent oligonucleotide probes targeting kingdom-level 16S rRNA sequences
-
Hicks, R. E., R. I. Amann, and D. A. Stahl. 1992. Dual staining of natural bacterioplankton with 4′,6-diamidino-2-phenylindole and fluorescent oligonucleotide probes targeting kingdom-level 16S rRNA sequences. Appl. Environ. Microbiol. 58:2158-2163.
-
(1992)
Appl. Environ. Microbiol.
, vol.58
, pp. 2158-2163
-
-
Hicks, R.E.1
Amann, R.I.2
Stahl, D.A.3
-
13
-
-
0017654644
-
Use of Nuclepore filters for counting bacteria by epifluorescence microscopy
-
Hobbie, J. E., R. J. Daley, and S. Jasper. 1977. Use of Nuclepore filters for counting bacteria by epifluorescence microscopy. Appl. Environ. Microbiol. 33:1225-1228.
-
(1977)
Appl. Environ. Microbiol.
, vol.33
, pp. 1225-1228
-
-
Hobbie, J.E.1
Daley, R.J.2
Jasper, S.3
-
14
-
-
0001311443
-
Determination and properties of actively metabolizing heterotrophic bacteria in the sea, investigated by means of micro-autoradiography
-
Hoppe, H.-G. 1976. Determination and properties of actively metabolizing heterotrophic bacteria in the sea, investigated by means of micro-autoradiography. Mar. Biol. 36:291-302.
-
(1976)
Mar. Biol.
, vol.36
, pp. 291-302
-
-
Hoppe, H.-G.1
-
15
-
-
0000648132
-
Bacterial activity related to sedimenting particulate matter
-
Iturriaga, R. 1979. Bacterial activity related to sedimenting particulate matter. Mar. Biol. 55:157-169.
-
(1979)
Mar. Biol.
, vol.55
, pp. 157-169
-
-
Iturriaga, R.1
-
16
-
-
0030039040
-
Bacterioplankton RNA, DNA, protein content and relationships to rates of thymidine and leucine incorporation
-
Jeffrey, W. H., R. Von Haven, M. Hoch, and R. B. Coffin. 1996. Bacterioplankton RNA, DNA, protein content and relationships to rates of thymidine and leucine incorporation. Aquat. Microb. Ecol. 10:87-95.
-
(1996)
Aquat. Microb. Ecol.
, vol.10
, pp. 87-95
-
-
Jeffrey, W.H.1
Von Haven, R.2
Hoch, M.3
Coffin, R.B.4
-
17
-
-
0027282946
-
Measurement of rRNA variations in natural communities of microorganisms on the southeastern U.S. continental shelf
-
Kramer, J., and F. L. Singleton. 1993. Measurement of rRNA variations in natural communities of microorganisms on the southeastern U.S. continental shelf. Appl. Environ. Microbiol. 59:2430-2436.
-
(1993)
Appl. Environ. Microbiol.
, vol.59
, pp. 2430-2436
-
-
Kramer, J.1
Singleton, F.L.2
-
18
-
-
0008048504
-
Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses
-
Lane, D. J., B. Pace, G. J. Olsen, D. A. Stahl, M. L. Sogin, and N. R. Pace. 1985. Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proc. Natl. Acad. Sci. USA 82:6955-6959.
-
(1985)
Proc. Natl. Acad. Sci. USA
, vol.82
, pp. 6955-6959
-
-
Lane, D.J.1
Pace, B.2
Olsen, G.J.3
Stahl, D.A.4
Sogin, M.L.5
Pace, N.R.6
-
19
-
-
0028082720
-
Single-cell RNA content of natural marine planktonic bacteria measured by hybridization with multiple 16S rRNA-targeted fluorescent probes
-
Lee, S., and P. F. Kemp. 1994. Single-cell RNA content of natural marine planktonic bacteria measured by hybridization with multiple 16S rRNA-targeted fluorescent probes. Limnol. Oceanogr. 39:869-879.
-
(1994)
Limnol. Oceanogr.
, vol.39
, pp. 869-879
-
-
Lee, S.1
Kemp, P.F.2
-
20
-
-
0027134061
-
Use of multiple 16S rRNA-targeted fluorescent probes to increase signal strength and measure cellular RNA from natural planktonic bacteria
-
Lee, S., C. Malone, and P. F. Kemp. 1993. Use of multiple 16S rRNA-targeted fluorescent probes to increase signal strength and measure cellular RNA from natural planktonic bacteria. Mar. Ecol. Prog. Ser. 101:193-201.
-
(1993)
Mar. Ecol. Prog. Ser.
, vol.101
, pp. 193-201
-
-
Lee, S.1
Malone, C.2
Kemp, P.F.3
-
21
-
-
0001172489
-
Species composition shift of confined bacterioplankton studied at the level of community DNA
-
Lee, S. H., and J. A. Fuhrman. 1991. Species composition shift of confined bacterioplankton studied at the level of community DNA. Mar. Ecol. Prog. Ser. 79:195-201.
-
(1991)
Mar. Ecol. Prog. Ser.
, vol.79
, pp. 195-201
-
-
Lee, S.H.1
Fuhrman, J.A.2
-
22
-
-
0030029518
-
Bacterial activity during early winter mixing (Gulf of St. Lawrence, Canada)
-
Lovejoy, C., L. Legendre, B. Klein, J.-E. Tremblay, and R. G. Ingram. 1996. Bacterial activity during early winter mixing (Gulf of St. Lawrence, Canada). Aquat. Microb. Ecol. 10:1-13.
-
(1996)
Aquat. Microb. Ecol.
, vol.10
, pp. 1-13
-
-
Lovejoy, C.1
Legendre, L.2
Klein, B.3
Tremblay, J.-E.4
Ingram, R.G.5
-
23
-
-
0028170111
-
The Ribosomal Database Project
-
Maidak, B. L., N. Larsen, M. J. McCaughey, R. Overbeek, G. J. Olsen, K. Fogel, J. Blandy, and C. R. Woese. 1994. The Ribosomal Database Project. Nucleic Acids Res. 22:3485-3487.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 3485-3487
-
-
Maidak, B.L.1
Larsen, N.2
McCaughey, M.J.3
Overbeek, R.4
Olsen, G.J.5
Fogel, K.6
Blandy, J.7
Woese, C.R.8
-
24
-
-
84986736629
-
Diel and depth variations in dissolved free amino acids and ammonium in the Baltic Sea determined by shipboard HPLC analysis
-
Mopper, K., and P. Lindroth. 1982. Diel and depth variations in dissolved free amino acids and ammonium in the Baltic Sea determined by shipboard HPLC analysis. Limnol. Oceanogr. 27:336-347.
-
(1982)
Limnol. Oceanogr.
, vol.27
, pp. 336-347
-
-
Mopper, K.1
Lindroth, P.2
-
25
-
-
0029176568
-
A simple method for the quantification of a class of labile marine pico- And nano-sized detritus: DAPI Yellow Particles (DYP)
-
Mostajir, B., J. Dolan, and F. Rassoulzadegan. 1995. A simple method for the quantification of a class of labile marine pico-and nano-sized detritus: DAPI Yellow Particles (DYP). Aquat. Microb. Ecol. 9:259-266.
-
(1995)
Aquat. Microb. Ecol.
, vol.9
, pp. 259-266
-
-
Mostajir, B.1
Dolan, J.2
Rassoulzadegan, F.3
-
26
-
-
0016279594
-
The ocean's food web, a changing paradigm
-
Pomeroy, L. R. 1974. The ocean's food web, a changing paradigm. Bio-Science 24:499-504.
-
(1974)
Bio-Science
, vol.24
, pp. 499-504
-
-
Pomeroy, L.R.1
-
27
-
-
84986870589
-
The use of DAPI for identifying and counting aquatic microflora
-
Porter, K., and Y. S. Feig. 1980. The use of DAPI for identifying and counting aquatic microflora. Limnol. Oceanogr. 25:943-948.
-
(1980)
Limnol. Oceanogr.
, vol.25
, pp. 943-948
-
-
Porter, K.1
Feig, Y.S.2
-
28
-
-
0026642952
-
Use of a fluorescent redox probe for direct visualization of actively respiring bacteria
-
Rodriguez, G. G., D. Phipps, K. Ishiguro, and H. F. Ridgway. 1992. Use of a fluorescent redox probe for direct visualization of actively respiring bacteria. Appl. Environ. Microbiol. 58:1801-1808.
-
(1992)
Appl. Environ. Microbiol.
, vol.58
, pp. 1801-1808
-
-
Rodriguez, G.G.1
Phipps, D.2
Ishiguro, K.3
Ridgway, H.F.4
-
29
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Ed.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
31
-
-
0028855407
-
Overestimation of heterotrophic bacteria in the Sargasso Sea: Direct evidence by flow and imaging cytometry
-
Sieracki, M. E., E. M. Haugen, and T. L. Cucci. 1995. Overestimation of heterotrophic bacteria in the Sargasso Sea: direct evidence by flow and imaging cytometry. Deep Sea Res. 42:1399-1409.
-
(1995)
Deep Sea Res.
, vol.42
, pp. 1399-1409
-
-
Sieracki, M.E.1
Haugen, E.M.2
Cucci, T.L.3
-
32
-
-
0027059943
-
Distributions and fluorochrome-staining properties of submicrometer particles and bacteria in the North-Atlantic
-
Sieracki, M. E., and C. L. Viles. 1992. Distributions and fluorochrome-staining properties of submicrometer particles and bacteria in the North-Atlantic. Deep Sea Res. 39:1919-1929.
-
(1992)
Deep Sea Res.
, vol.39
, pp. 1919-1929
-
-
Sieracki, M.E.1
Viles, C.L.2
-
33
-
-
0027332984
-
DAPI direct counting underestimates bacterial abundances and average cell-size compared to AO direct counting
-
Suzuki, M. T., E. B. Sherr, and B. F. Sherr. 1993. DAPI direct counting underestimates bacterial abundances and average cell-size compared to AO direct counting. Limnol. Oceanogr. 38:1566-1570.
-
(1993)
Limnol. Oceanogr.
, vol.38
, pp. 1566-1570
-
-
Suzuki, M.T.1
Sherr, E.B.2
Sherr, B.F.3
-
34
-
-
0019943265
-
Improved method for determination of respiring individual microorganisms in natural waters
-
Tabor, P. S., and R. A. Neihof. 1982. Improved method for determination of respiring individual microorganisms in natural waters. Appl. Environ. Microbiol. 43:1249-1255.
-
(1982)
Appl. Environ. Microbiol.
, vol.43
, pp. 1249-1255
-
-
Tabor, P.S.1
Neihof, R.A.2
-
35
-
-
0026564045
-
Effects of storage on direct estimates of bacterial numbers of preserved seawater samples
-
Turley, C. M., and D. J. Hughes. 1992. Effects of storage on direct estimates of bacterial numbers of preserved seawater samples. Deep Sea Res. 39:375-394.
-
(1992)
Deep Sea Res.
, vol.39
, pp. 375-394
-
-
Turley, C.M.1
Hughes, D.J.2
-
36
-
-
0029974413
-
Identification in situ and dynamics of bacteria on limnetic organic aggregates (lake snow)
-
Weiss, P., B. Schweitzer, R. Amann, and M. Simon. 1996. Identification in situ and dynamics of bacteria on limnetic organic aggregates (lake snow). Appl. Environ. Microbiol. 62:1998-2005.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 1998-2005
-
-
Weiss, P.1
Schweitzer, B.2
Amann, R.3
Simon, M.4
-
37
-
-
0029958586
-
Toxic effects on bacterial metabolism of the redox dye 5-cyano-2,3-ditolyl tetrazolium chloride
-
Ullrich, S., B. Karrasch, H.-G. Hoppe, K. Jeskulke, and M. Mehrens. 1996. Toxic effects on bacterial metabolism of the redox dye 5-cyano-2,3-ditolyl tetrazolium chloride. Appl. Environ. Microbiol. 62:4587-4593.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 4587-4593
-
-
Ullrich, S.1
Karrasch, B.2
Hoppe, H.-G.3
Jeskulke, K.4
Mehrens, M.5
-
38
-
-
0343823499
-
-
Personal communication
-
Zweifel, U.-L. 1995. Personal communication.
-
(1995)
-
-
Zweifel, U.-L.1
-
39
-
-
0028990019
-
Total counts of marine bacteria include a large fraction of non-nucleoid-containing bacteria (ghosts)
-
Zweifel, U.-L., and Å. Hagström. 1995. Total counts of marine bacteria include a large fraction of non-nucleoid-containing bacteria (ghosts). Appl. Environ. Microbiol. 61:2180-2185.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 2180-2185
-
-
Zweifel, U.-L.1
Hagström, Å.2
|