메뉴 건너뛰기




Volumn 60, Issue 1, 2005, Pages 63-71

Culture independent PCR: An alternative enzyme discovery strategy

Author keywords

Bio fuel; ciPCR; Composite sample; Glycosy hydrolase

Indexed keywords

AIR POLLUTION; AMINO ACID SEQUENCE; ARTICLE; BIOMASS; CONTROLLED STUDY; DNA DETERMINATION; FUNGUS; GENE AMPLIFICATION; GENE SEQUENCE; MEDICAL RESEARCH; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL;

EID: 9644291452     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mimet.2004.08.013     Document Type: Article
Times cited : (20)

References (35)
  • 3
    • 0035284081 scopus 로고    scopus 로고
    • PCR primers and functional probes for amplification and detection of bacterial genes for extracellular peptidases in single strains and in soil
    • H.J. Bach, A. Hartmann, M. Schloter, and J.C. Munch PCR primers and functional probes for amplification and detection of bacterial genes for extracellular peptidases in single strains and in soil J. Microbiol. Methods 44 2001 173 182
    • (2001) J. Microbiol. Methods , vol.44 , pp. 173-182
    • Bach, H.J.1    Hartmann, A.2    Schloter, M.3    Munch, J.C.4
  • 4
    • 0037841805 scopus 로고    scopus 로고
    • The deep roots of eukaryotes
    • S.L. Baldauf The deep roots of eukaryotes Science 300 2003 1703 1706
    • (2003) Science , vol.300 , pp. 1703-1706
    • Baldauf, S.L.1
  • 5
    • 0027883238 scopus 로고
    • Dating the evolutionary radiations of the true fungi
    • M.L. Berbee, and J.W. Taylor Dating the evolutionary radiations of the true fungi Can. J. Bot. 71 1993 1114 1127
    • (1993) Can. J. Bot. , vol.71 , pp. 1114-1127
    • Berbee, M.L.1    Taylor, J.W.2
  • 6
    • 0035809069 scopus 로고    scopus 로고
    • Optimized mixtures of recombinant Humicola insolens cellulases for the biodegradation of crystalline cellulose
    • C. Boisset, C. Petrequin, H. Chanzy, B. Henrissat, and M. Schulein Optimized mixtures of recombinant Humicola insolens cellulases for the biodegradation of crystalline cellulose Biotechnol. Bioeng. 72 2001 339 345
    • (2001) Biotechnol. Bioeng. , vol.72 , pp. 339-345
    • Boisset, C.1    Petrequin, C.2    Chanzy, H.3    Henrissat, B.4    Schulein, M.5
  • 7
    • 0346139366 scopus 로고
    • Ovalbumin gene-evidence for a leader sequence in messenger-RNA and DNA sequences at exon-intron boundaries
    • R. Breathnac, C. Benoist, K. O'Hare, F. Gannon, and P. Chambon Ovalbumin gene-evidence for a leader sequence in messenger-RNA and DNA sequences at exon-intron boundaries Proc. Natl. Acad. Sci. U. S. A. 75 1978 4853 4857
    • (1978) Proc. Natl. Acad. Sci. U. S. A. , vol.75 , pp. 4853-4857
    • Breathnac, R.1    Benoist, C.2    O'Hare, K.3    Gannon, F.4    Chambon, P.5
  • 8
    • 0001773150 scopus 로고    scopus 로고
    • The end of cheap oil
    • C.J. Campbell The end of cheap oil Sci. Am. 278 1998 77 83
    • (1998) Sci. Am. , vol.278 , pp. 77-83
    • Campbell, C.J.1
  • 9
    • 0037062470 scopus 로고    scopus 로고
    • Novel kingdom-level eukaryotic diversity in anoxic environments
    • S.C. Dawson, and N.R. Pace Novel kingdom-level eukaryotic diversity in anoxic environments Proc. Natl. Acad. Sci. U. S. A. 99 2002 8324 8329
    • (2002) Proc. Natl. Acad. Sci. U. S. A. , vol.99 , pp. 8324-8329
    • Dawson, S.C.1    Pace, N.R.2
  • 10
    • 0035527414 scopus 로고    scopus 로고
    • Environmental diversity of bacteria and archaea
    • E.E. DeLong, and N.R. Pace Environmental diversity of bacteria and archaea Syst. Biol. 50 2001 470 478
    • (2001) Syst. Biol. , vol.50 , pp. 470-478
    • Delong, E.E.1    Pace, N.R.2
  • 11
    • 0024152983 scopus 로고
    • Phylogenies from molecular sequences-inference and reliability
    • J. Felsenstein Phylogenies from molecular sequences-inference and reliability Annu. Rev. Genet. 22 1988 521 565
    • (1988) Annu. Rev. Genet. , vol.22 , pp. 521-565
    • Felsenstein, J.1
  • 12
    • 0037927709 scopus 로고    scopus 로고
    • Techniques conversations with the silent majority
    • J. Handelsman, and K. Smalla Techniques conversations with the silent majority Curr. Opin. Microbiol. 6 2003 271 273
    • (2003) Curr. Opin. Microbiol. , vol.6 , pp. 271-273
    • Handelsman, J.1    Smalla, K.2
  • 13
    • 35448976959 scopus 로고    scopus 로고
    • Cloning the metagenome: Culture-independent access to the diversity and functions of the uncultivated microbial world
    • J. Handelsman, M. Liles, D. Mann, C. Riesenfeld, and R.M. Goodman Cloning the metagenome: culture-independent access to the diversity and functions of the uncultivated microbial world Methods Microbiol. 33 2002 241 255
    • (2002) Methods Microbiol. , vol.33 , pp. 241-255
    • Handelsman, J.1    Liles, M.2    Mann, D.3    Riesenfeld, C.4    Goodman, R.M.5
  • 14
    • 0029791403 scopus 로고    scopus 로고
    • Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information
    • S.M. Hebsgaard, P.G. Korning, N. Tolstrup, J. Engelbrecht, P. Rouze, and S. Brunak Splice site prediction in Arabidopsis thaliana pre-mRNA by combining local and global sequence information Nucleic Acids Res. 24 1996 3439 3452
    • (1996) Nucleic Acids Res. , vol.24 , pp. 3439-3452
    • Hebsgaard, S.M.1    Korning, P.G.2    Tolstrup, N.3    Engelbrecht, J.4    Rouze, P.5    Brunak, S.6
  • 15
    • 0026055308 scopus 로고
    • A classification of glycosyl hydrolases based on amino-acid-sequence similarities
    • B. Henrissat A classification of glycosyl hydrolases based on amino-acid-sequence similarities Biochem. J. 280 1991 309 316
    • (1991) Biochem. J. , vol.280 , pp. 309-316
    • Henrissat, B.1
  • 16
    • 0029929874 scopus 로고    scopus 로고
    • Updating the sequence-based classification of glycosyl hydrolases
    • B. Henrissat, and A. Bairoch Updating the sequence-based classification of glycosyl hydrolases Biochem. J. 316 1996 695 696
    • (1996) Biochem. J. , vol.316 , pp. 695-696
    • Henrissat, B.1    Bairoch, A.2
  • 17
    • 0000986969 scopus 로고
    • Ribosomal RNA and fungal systematics
    • D.S. Hibbet Ribosomal RNA and fungal systematics Trans. Mycol. Soc. Japan 33 1992 533 556
    • (1992) Trans. Mycol. Soc. Japan , vol.33 , pp. 533-556
    • Hibbet, D.S.1
  • 18
    • 0029970177 scopus 로고    scopus 로고
    • Identifying microbial diversity in the natural environment: A molecular phylogenetic approach
    • P. Hugenholtz, and N.R. Pace Identifying microbial diversity in the natural environment: a molecular phylogenetic approach Trends Biotechnol. 14 1996 190 197
    • (1996) Trends Biotechnol. , vol.14 , pp. 190-197
    • Hugenholtz, P.1    Pace, N.R.2
  • 19
    • 0036139211 scopus 로고    scopus 로고
    • MEGA2: Molecular evolutionary genetics analysis
    • S. Kumar, K. Tamura, I. Jakobsen, and M. Nei MEGA2: molecular evolutionary genetics analysis Bioinformatics 17 2001 1244 1245
    • (2001) Bioinformatics , vol.17 , pp. 1244-1245
    • Kumar, S.1    Tamura, K.2    Jakobsen, I.3    Nei, M.4
  • 20
    • 0000003052 scopus 로고
    • Relationships of the genus Neolecta (Neolectales ordo no., Ascomycotina) inferred from 18S rDNA sequences
    • S. Landvik, O.E. Eriksson, A. Gargas, and P. Gustafsson Relationships of the genus Neolecta (Neolectales ordo no., Ascomycotina) inferred from 18S rDNA sequences Syst. Ascomycetum 11 1993 107 118
    • (1993) Syst. Ascomycetum , vol.11 , pp. 107-118
    • Landvik, S.1    Eriksson, O.E.2    Gargas, A.3    Gustafsson, P.4
  • 22
    • 0343924314 scopus 로고    scopus 로고
    • Biological conversion of lignocellulosic biomass to ethanol
    • J. Lee Biological conversion of lignocellulosic biomass to ethanol J. Biotechnol. 56 1997 1 24
    • (1997) J. Biotechnol. , vol.56 , pp. 1-24
    • Lee, J.1
  • 23
    • 9644272986 scopus 로고    scopus 로고
    • Bacteria and archea: Molecular techniques reveal astonishing diversity
    • J.O. Mcinerney, and M. Mullarkey Bacteria and archea: molecular techniques reveal astonishing diversity Biodiversity 3 2001 3 10
    • (2001) Biodiversity , vol.3 , pp. 3-10
    • McInerney, J.O.1    Mullarkey, M.2
  • 24
    • 0000968737 scopus 로고
    • Pretreatment of lignocellulosic
    • M.E. Himmel J.O. Baker R.P. Overend Am. Chem. Soc Washington, DC
    • J.D. Mcmillan Pretreatment of lignocellulosic M.E. Himmel J.O. Baker R.P. Overend Enzymatic Conversion of Biomass for Fuels Production 1994 Am. Chem. Soc Washington, DC 292 324
    • (1994) Enzymatic Conversion of Biomass for Fuels Production , pp. 292-324
    • McMillan, J.D.1
  • 25
    • 0030982247 scopus 로고    scopus 로고
    • A molecular view of microbial diversity and the biosphere
    • N.R. Pace A molecular view of microbial diversity and the biosphere Science 276 1997 734 740
    • (1997) Science , vol.276 , pp. 734-740
    • Pace, N.R.1
  • 29
    • 0027441283 scopus 로고
    • Bacterial diversity in a soil sample from a subtropical Australian environment as determined by 16S rDNA analysis
    • E. Stackebrandt, W. Liesack, and B.M. Goebel Bacterial diversity in a soil sample from a subtropical Australian environment as determined by 16S rDNA analysis FASEB J. 7 1993 232 236
    • (1993) FASEB J. , vol.7 , pp. 232-236
    • Stackebrandt, E.1    Liesack, W.2    Goebel, B.M.3
  • 30
    • 0036159062 scopus 로고    scopus 로고
    • Hydrolysis of lignocellulosic materials for ethanol production: A review
    • Y. Sun, and J.Y. Cheng Hydrolysis of lignocellulosic materials for ethanol production: a review Bioresour. Technol. 83 2002 1 11
    • (2002) Bioresour. Technol. , vol.83 , pp. 1-11
    • Sun, Y.1    Cheng, J.Y.2
  • 31
    • 0031883653 scopus 로고    scopus 로고
    • Cloning, nucleotide sequence, and transcriptional analysis of Aspergillus aculeatus No. F-50 cellobiohydrolase I (cbhI) gene
    • G. Takada, T. Kawaguchi, J. Sumitani, and M. Arai Cloning, nucleotide sequence, and transcriptional analysis of Aspergillus aculeatus No. F-50 cellobiohydrolase I (cbhI) gene J. Ferment. Bioeng. 85 1998 1 9
    • (1998) J. Ferment. Bioeng. , vol.85 , pp. 1-9
    • Takada, G.1    Kawaguchi, T.2    Sumitani, J.3    Arai, M.4
  • 32
    • 0027968068 scopus 로고
    • Clustal-W-improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
    • J.D. Thompson, D.G. Higgins, and T.J. Gibson Clustal-W-improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice Nucleic Acids Res. 22 1994 4673 4680
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 34
    • 0031892518 scopus 로고    scopus 로고
    • Phylogenetic profiles: A graphical method for detecting genetic recombinations in homologous sequences
    • G.F. Weiller Phylogenetic profiles: a graphical method for detecting genetic recombinations in homologous sequences Mol. Biol. Evol. 15 1998 326 335
    • (1998) Mol. Biol. Evol. , vol.15 , pp. 326-335
    • Weiller, G.F.1
  • 35
    • 0034922896 scopus 로고    scopus 로고
    • Fuel ethanol production from lignocellulose: A challenge for metabolic engineering and process integration
    • J. Zaldivar, J. Nielsen, and L. Olsson Fuel ethanol production from lignocellulose: a challenge for metabolic engineering and process integration Appl. Environ. Microbiol. 56 2001 17 34
    • (2001) Appl. Environ. Microbiol. , vol.56 , pp. 17-34
    • Zaldivar, J.1    Nielsen, J.2    Olsson, L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.