-
1
-
-
0028789793
-
Serial analysis of gene expression
-
Velculescu VE, Ahang L, Vogelstein B, Kinzler KW: Serial analysis of gene expression. Science 1995, 270:484-487.
-
(1995)
Science
, vol.270
, pp. 484-487
-
-
Velculescu, V.E.1
Ahang, L.2
Vogelstein, B.3
Kinzler, K.W.4
-
2
-
-
0029748326
-
Parallel human genome analysis: Microarray-based expression monitoring of 1000 genes
-
Schena MD, Shalon D, Heller R, Chai A, Brown PO, Davis RW: Parallel human genome analysis: Microarray-based expression monitoring of 1000 genes. Proc Natl Acad Sci USA 1996, 93:10614-10619.
-
(1996)
Proc. Natl. Acad. Sci. USA
, vol.93
, pp. 10614-10619
-
-
Schena, M.D.1
Shalon, D.2
Heller, R.3
Chai, A.4
Brown, P.O.5
Davis, R.W.6
-
3
-
-
0030669030
-
Exploring the metabolic and genetic control of gene expression on a genomic scale
-
DeRisi JL, Iyer VR, Brown PO: Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 1997, 278:680-686.
-
(1997)
Science
, vol.278
, pp. 680-686
-
-
DeRisi, J.L.1
Iyer, V.R.2
Brown, P.O.3
-
5
-
-
0036009442
-
A compilation of soybean ESTs: Generation and analysis
-
Shoemaker R, Keim P, Vodkin L, Retzel E, Clifton SW, Waterston , Smoller D, Coryell V, Khanna A, Erpelding J, Gai X, Brendel V, Raph-Schmidt C, Shoop EG, Vielweber CJ, Schmatz M, Pape D, Bowers Y, Theising B, Martin J, Dante M, Wylie T, Granger C: A compilation of soybean ESTs: generation and analysis. Genome 2002, 45 329-338.
-
(2002)
Genome
, vol.45
, pp. 329-338
-
-
Shoemaker, R.1
Keim, P.2
Vodkin, L.3
Retzel, E.4
Clifton, S.W.5
Waterston, A.6
Smoller, D.7
Coryell, V.8
Khanna, A.9
Erpelding, J.10
Gai, X.11
Brendel, V.12
Raph-Schmidt, C.13
Shoop, E.G.14
Vielweber, C.J.15
Schmatz, M.16
Pape, D.17
Bowers, Y.18
Theising, B.19
Martin, J.20
Dante, M.21
Wylie, T.22
Granger, C.23
more..
-
6
-
-
0032769184
-
Genes, genomes, genomics. What can plant biologists expect from the 1998 National Science Foundation Plant Genome Research Program
-
Walbot V: Genes, genomes, genomics. What can plant biologists expect from the 1998 National Science Foundation Plant Genome Research Program. Plant Physiol 1999, 119:1151-1155.
-
(1999)
Plant Physiol.
, vol.119
, pp. 1151-1155
-
-
Walbot, V.1
-
7
-
-
0003614220
-
Documentation for Phrap
-
Genome Center, University of Washington
-
Green P: Documentation for Phrap. [http://bozeman.mbt.washington.edu]. Genome Center, University of Washington
-
-
-
Green, P.1
-
8
-
-
9144226843
-
TIGR Gene Indices The Institute for Genome Research
-
TIGR Gene Indices The Institute for Genome Research: [http://www.tigr.org/tdb/tgi]
-
-
-
-
9
-
-
0034649566
-
Arabidopsis Genome Initiative
-
Arabidopsis Genome Initiative. Nature 2000, 408:796-815.
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
-
10
-
-
0345051044
-
Normalization and subtraction: Two approaches to facilitate gene discovery
-
Bonaldo MF, Lennon G, Soares MB: Normalization and subtraction: Two approaches to facilitate gene discovery. Genome Res 1996, 6:791-806.
-
(1996)
Genome Res.
, vol.6
, pp. 791-806
-
-
Bonaldo, M.F.1
Lennon, G.2
Soares, M.B.3
-
11
-
-
0032849859
-
CAP3: A DNA sequence assembly program
-
Huang X, Madan A: CAP3: A DNA sequence assembly program Genome Res 1999, 9:868-877.
-
(1999)
Genome Res.
, vol.9
, pp. 868-877
-
-
Huang, X.1
Madan, A.2
-
12
-
-
0030801002
-
BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ: BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 1997, 25 3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
13
-
-
0037274628
-
Cloning of the pleiotropic T locus in soybean and two recessive alleles that differentially affect structure and expression of the encoded flavonoid 3′ hydroxylase
-
Zabala GZ, Vodkin LO: Cloning of the pleiotropic T locus in soybean and two recessive alleles that differentially affect structure and expression of the encoded flavonoid 3′ hydroxylase. Genetics 2003, 163:295-309.
-
(2003)
Genetics
, vol.163
, pp. 295-309
-
-
Zabala, G.Z.1
Vodkin, L.O.2
-
14
-
-
0024720617
-
Developmentally regulated expression of soybean Proline-Rich cell wall protein genes
-
Hong JC, Nagao RT, Key JL: Developmentally regulated expression of soybean Proline-Rich cell wall protein genes. Plant Cell 1989, 1:937-943.
-
(1989)
Plant Cell
, vol.1
, pp. 937-943
-
-
Hong, J.C.1
Nagao, R.T.2
Key, J.L.3
-
15
-
-
0242515797
-
Tissue-specific gene expression in soybean (Glycine max) detected by cDNA microarray analysis
-
Maguire TL, Grimmond S, Forrest A, Iturbe-Ormaetze I, Meksem K, Gresshoff P: Tissue-specific gene expression in soybean (Glycine max) detected by cDNA microarray analysis. J Plant Physiol 2002, 159:1361-1374.
-
(2002)
J. Plant Physiol.
, vol.159
, pp. 1361-1374
-
-
Maguire, T.L.1
Grimmond, S.2
Forrest, A.3
Iturbe-Ormaetze, I.4
Meksem, K.5
Gresshoff, P.6
-
16
-
-
0037507700
-
Clustering of microarray data reveals transcript patterns associated with somatic embryogenesis in soybean
-
Thibaud-Nissen F, Shealy RT, Khanna A, Vodkin LO: Clustering of microarray data reveals transcript patterns associated with somatic embryogenesis in soybean. Plant Physiol 2003, 132 118-136.
-
(2003)
Plant Physiol.
, vol.132
, pp. 118-136
-
-
Thibaud-Nissen, F.1
Shealy, R.T.2
Khanna, A.3
Vodkin, L.O.4
-
17
-
-
2442669379
-
National Science Foundation-Sponsored Workshop Report: Draft Plan for Soybean Genomics
-
Stacey G, Vodkin L, Parrott WA, Shoemaker RC: National Science Foundation-Sponsored Workshop Report: Draft Plan for Soybean Genomics. Plant Physiol 2004, 135:59-70.
-
(2004)
Plant Physiol.
, vol.135
, pp. 59-70
-
-
Stacey, G.1
Vodkin, L.2
Parrott, W.A.3
Shoemaker, R.C.4
-
18
-
-
0031978181
-
Base-calling of automated sequencer traces using phred. II. Error probabilities
-
Ewing B, Green P: Base-calling of automated sequencer traces using phred. II. Error probabilities. Genome Res 1998, 8:186-194.
-
(1998)
Genome Res.
, vol.8
, pp. 186-194
-
-
Ewing, B.1
Green, P.2
-
19
-
-
0031955518
-
Base-calling of automated sequencer traces using phred. I. Accuracy assessment
-
Ewing B, Hillier G, Wendl MC, Green P: Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res 1998, 8:175-185.
-
(1998)
Genome Res.
, vol.8
, pp. 175-185
-
-
Ewing, B.1
Hillier, G.2
Wendl, M.C.3
Green, P.4
-
20
-
-
9144236289
-
Soybean Genomics Initiative
-
Soybean Genomics Initiative: [http://soybean.ccgb.umn.edu]
-
-
-
-
21
-
-
9144256092
-
-
Keck Center for Comparative and Functional Genomics, University of Illinois
-
Keck Center for Comparative and Functional Genomics, University of Illinois: [http://www.biotech.uiuc.edu/keck.shtml]
-
-
-
-
22
-
-
9144251641
-
-
NCBI dbEST
-
NCBI dbEST: [http://www.ncbi.nih.gov/dbEST/index.html]
-
-
-
-
23
-
-
0037255072
-
The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003
-
Boeckmann B, Bairoch A, Apweiler R, Blatter MC, Estreicher A, Gasteiger E, Martin MJ, Michoud K, O'Donovan C, Phan I, Pilbout S, Schneider M: The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003. Nucleic Acids Res 2003, 31:365-70.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 365-370
-
-
Boeckmann, B.1
Bairoch, A.2
Apweiler, R.3
Blatter, M.C.4
Estreicher, A.5
Gasteiger, E.6
Martin, M.J.7
Michoud, K.8
O'Donovan, C.9
Phan, I.10
Pilbout, S.11
Schneider, M.12
-
24
-
-
0037246063
-
The Protein Information Resource
-
Wu CH, Yeh LS, Huang H, Arminski L, Castro-Alvear J, Chen Y, Hu Z, Kourtesis P, Ledley RS, Suzek BE, Vinayaka CR, Zhang J, Barker WC: The Protein Information Resource. Nucleic Acids Res 2003, 31:345-7.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 345-347
-
-
Wu, C.H.1
Yeh, L.S.2
Huang, H.3
Arminski, L.4
Castro-Alvear, J.5
Chen, Y.6
Hu, Z.7
Kourtesis, P.8
Ledley, R.S.9
Suzek, B.E.10
Vinayaka, C.R.11
Zhang, J.12
Barker, W.C.13
-
25
-
-
0037252705
-
Database resources of the National Center for Biotechnology
-
Wheeler DL, Church DM, Federhen S, Lash AE, Madden TL, Pontius JU, Schuler GD, Schriml LM, Sequeira E, Tatusova TA, Wagner L: Database resources of the National Center for Biotechnology. Nucleic Acids Res 2003, 31:28-33.
-
(2003)
Nucleic Acids Res.
, vol.31
, pp. 28-33
-
-
Wheeler, D.L.1
Church, D.M.2
Federhen, S.3
Lash, A.E.4
Madden, T.L.5
Pontius, J.U.6
Schuler, G.D.7
Schriml, L.M.8
Sequeira, E.9
Tatusova, T.A.10
Wagner, L.11
-
26
-
-
0035070577
-
MetaFam: A Unified Classification of Protein Families. II. Schema and Query Capabilities
-
Shoop E, Silverstein KAT, Johnson JE, Retzel EF: MetaFam: a Unified Classification of Protein Families. II. Schema and Query Capabilities. Bioinformatics 2001, 17:262-271.
-
(2001)
Bioinformatics
, vol.17
, pp. 262-271
-
-
Shoop, E.1
Silverstein, K.A.T.2
Johnson, J.E.3
Retzel, E.F.4
-
27
-
-
0035172122
-
The MetaFam Server: A comprehensive protein family resource
-
Silverstein KAT, Shoop E, Johnson JE, Kilian A, Freeman JL, Kunau TM, Awad IA, Mayer M, Retzel EF: The MetaFam Server: a comprehensive protein family resource. Nucleic Acids Research 2001, 29:49-51.
-
(2001)
Nucleic Acids Research
, vol.29
, pp. 49-51
-
-
Silverstein, K.A.T.1
Shoop, E.2
Johnson, J.E.3
Kilian, A.4
Freeman, J.L.5
Kunau, T.M.6
Awad, I.A.7
Mayer, M.8
Retzel, E.F.9
-
28
-
-
0035075436
-
MetaFam: A Unified Classification of Protein Families. I. Overview and Statistics
-
Silverstein KAT, Shoop E, Johnson JE, Retzel EF: MetaFam: a Unified Classification of Protein Families. I. Overview and Statistics Bioinformatics 2001, 17:249-261.
-
(2001)
Bioinformatics
, vol.17
, pp. 249-261
-
-
Silverstein, K.A.T.1
Shoop, E.2
Johnson, J.E.3
Retzel, E.F.4
-
29
-
-
84870532154
-
Gene Expression Omnibus
-
Gene Expression Omnibus: [http://www.ncbi.nlm.nih.gov/geo]
-
-
-
-
30
-
-
9144222634
-
Soybean Functional Genomics
-
Soybean Functional Genomics: [http://soybeangenomics.cropsci.uiuc.edu]
-
-
-
-
31
-
-
0002294574
-
A simple method for extraction of mRNA from maize tissue
-
McCarty DR: A simple method for extraction of mRNA from maize tissue. Maize Genet Coop Newsl 1986, 60:61.
-
(1986)
Maize Genet. Coop. Newsl.
, vol.60
, pp. 61
-
-
McCarty, D.R.1
-
32
-
-
51249168798
-
Extraction of RNA from tissues containing highlevels of procyanidins that bind RNA
-
Wang C-S, Vodkin LO: Extraction of RNA from tissues containing highlevels of procyanidins that bind RNA. Plant Mol Biol Rept 1994, 12:132-145.
-
(1994)
Plant Mol. Biol. Rept.
, vol.12
, pp. 132-145
-
-
Wang, C.-S.1
Vodkin, L.O.2
-
33
-
-
0033818954
-
A concise guide to cDNA microarray analysis
-
Hedge P, Qi R, Abernathy K, Gay C, Dharap S, Gaspard R, Hughes J, Snesrud E, Lee N, Quackenbush J: A concise guide to cDNA microarray analysis. Biotechniques 2000, 29:548-562.
-
(2000)
Biotechniques
, vol.29
, pp. 548-562
-
-
Hedge, P.1
Qi, R.2
Abernathy, K.3
Gay, C.4
Dharap, S.5
Gaspard, R.6
Hughes, J.7
Snesrud, E.8
Lee, N.9
Quackenbush, J.10
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