E-MSD: An integrated data resource for bioinformatics

Nucleic Acids Research

Volumn 32, Issue DATABASE ISS., 2004, Pages

  Golovin, A ^a   Oldfield, T J ^a   Tate, J G ^a   Velankar, S ^a   Barton, G J ^a   Boutselakis, H ^a   Dmitropoulos, D ^a   Fillon, J ^a   Hussain, A ^a   Ionides, J M C ^a   John, M ^a   Keller, P A ^a   Krissinel, E ^a   McNeil, P ^a   Naim, A ^a   Newman, R ^a   Pajon, A ^a   Pineda, J ^a   Rachedi, A ^a   Copeland, J ^a   Sitnov, A ^a   Sobhany, S ^a   Suarez Uruena, A ^a   Swaminathan, G J ^a   Tagari, M ^a   Tromm, S ^a   Vranken, W ^a   Henrick, K ^a   more..

^a WELLCOME TRUST SANGER INSTITUTE   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACID; LIGAND;

AMINO ACID SEQUENCE; ARTICLE; BIOINFORMATICS; EBI MACROMOLECULAR STRUCTURE DATABASE; INFORMATION RETRIEVAL; INFORMATION SYSTEM; INTERNET; MACROMOLECULE; NUCLEIC ACID DATABASE; NUCLEIC ACID STRUCTURE; PRIORITY JOURNAL; PROTEIN DATA BANK; PROTEIN SECONDARY STRUCTURE;

ALGORITHMS; ANIMALS; COMPUTATIONAL BIOLOGY; DATABASES, PROTEIN; HUMANS; INTERNET; LIGANDS; PROTEINS; USER-COMPUTER INTERFACE;

EID: 9144231249     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (14)

1. Berman,H.M., Battistuz,T., Bhat,T.N., Bluhm,W.F., Bourne,P.E., Burkhardt,K., Feng,Z., Gilliland,G.L., Iype,L., Jain,S. et al. (2002) The Protein Data Bank. Acta Crystallogr. D, 58, 899-907.
2. Boutselakis,H., Dimitropoulos,D., Fillon,J., Golovin,A., Henrick,K., Hussain,A., Ionides,J., John,M., Keller,P.A., Krissinel,E. et al. (2003) E-MSD: the European Bioinformatics Institute Macromolecular Structure Database. Nucleic Acids Res., 31, 458-462.
3. Lo Conte,L., Brenner,S.E., Hubbard,T.J., Chothia,C. and Murzin,A.G. (2002) SCOP database in 2002: refinements accommodate structural genomics. Nucleic Acids Res., 30, 264-267.
4. Orengo,C.A., Pearl,F.M. and Thornton,J.M. (2003) The CATH domain structure database. Methods Biochem. Anal., 44, 249-271.
5. Bairoch,A. and Boeckmann,B. (1994) The SWISS-PROT protein sequence data bank: current status. Nucleic Acids Res., 22, 3578-3580.
6. Mulder,N.J., Apweiler,R., Attwood,T.K., Bairoch,A., Barrell,D., Bateman,A., Binns,D., Biswas,M., Bradley,P., Bork,P. et al. (2003) The InterPro Database, 2003 brings increased coverage and new features. Nucleic Acids Res., 31, 315-318.
7. Bateman,A., Birney,E., Cerruti,L., Durbin,R., Etwiller,L., Eddy,S.R., Griffiths-Jones,S., Howe,K.L., Marshall,M. and Sonnhammer,E.L. (2002) The Pfam protein families database. Nucleic Acids Res., 30, 276-280.
8. Falquet,L., Pagni,M., Bucher,P., Hulo,N., Sigrist,C.J., Hofmann,K. and Bairoch,A. (2002) The PROSITE database, its status in 2002. Nucleic Acids Res., 30, 235-238.
9. Camon,E., Magrane,M., Barrell,D., Binns,D., Fleischmann,W., Kersey,P., Mulder,N., Oinn,T., Maslen,J., Cox,A. et al. (2003) The Gene Ontology Annotation (GOA) project: implementation of GO in SWISS-PROT, TrEMBL and InterPro. Genome Res., 13, 662-672.
10. Ebbert,J.O., Dupras,D.M. and Erwin,P.J. (2003) Searching the medical literature using PubMed: a tutorial. Mayo Clin. Proc., 78, 87-91.
11. Bairoch,A. (2000) The ENZYME database in 2000. Nucleic Acids Res., 28, 304-305.
12. Hartshorn,M.J. (2002) Astex Viewer: a visualisation aid for structure-based drug design. J. Comput. Aided Mol. Des., 16, 871-881.
13. Fua,Y.H., Ward,M. and Rudensteiner,E. (1999) Navigating hierarchies with structure-based brushes. IEEE Proceedings Information Visualization '99, pp. 58-64.
14. Stone,M., Fishkin,K. and Bier,E. (1994) The movable filter as a user interface tool. ACM Proceedings CHI '94, pp. 306-312.