Genotype and Subtype Analyses of Hepatitis B Virus (HBV) and Possible Co-Infection of HBV and Hepatitis C Virus (HCV) or Hepatitis D Virus (HDV) in Blood Donors, Patients with Chronic Liver Disease and Patients on Hemodialysis in Surabaya, Indonesia

Microbiology and Immunology

Volumn 47, Issue 12, 2003, Pages 969-975

  Lusida, Maria I ^a   Surayah, ^b   Sakugawa, Hiroshi ^c   Nagano Fujii, Motoko ^d   Soetjipto, ^a   Mulyanto, ^b   Handajani, Retno ^a   Boediwarsono, ^a   Setiawan, Poernomo B ^a   Nidom, Chairul A ^a   Ohgimoto, Shinji ^d   Hotta, Hak ^d  

^a AIRLANGGA UNIVERSITY   (Indonesia)

^b West Nusa Tenggara Hepatitis Laboratory   (Indonesia)

^c UNIVERSITY OF THE RYUKYUS SCHOOL OF MEDICINE   (Japan)

^d KOBE UNIVERSITY GRADUATE SCHOOL OF MEDICINE   (Japan)

Author keywords

Genotype; Hepatitis B virus; Indonesia; Subtype

Indexed keywords

HEPATITIS B ANTIGEN;

ANALYTIC METHOD; ARTICLE; BLOOD DONOR; CHRONIC LIVER DISEASE; ETHNIC GROUP; GENE LOCATION; GENOTYPE; GEOGRAPHIC DISTRIBUTION; HEMODIALYSIS; HEPATITIS B VIRUS; HEPATITIS C VIRUS; HEPATITIS DELTA VIRUS; HUMAN; HUMAN CELL; HUMAN IMMUNODEFICIENCY VIRUS PREVALENCE; INDONESIA; LIVER CIRRHOSIS; NUCLEOTIDE SEQUENCE; OUTCOMES RESEARCH; VIRUS CARRIER; VIRUS INFECTION;

HEPATITIS B VIRUS; HEPATITIS C VIRUS; HEPATITIS DELTA VIRUS; HUMAN IMMUNODEFICIENCY VIRUS; RNA VIRUSES;

EID: 9144222186     PISSN: 03855600     EISSN: None     Source Type: Journal    
DOI: 10.1111/j.1348-0421.2003.tb03457.x     Document Type: Article

References (42)

1. Arauz-Ruiz, P., Norder, H., Robertson, B.H., and Magnius, L.O. 2002. Genotype H: a new Amerindian genotype of hepatitis B virus revealed in Central America, J. Gen. Virol. 83: 2059-2073.
2. Arauz-Ruiz, P., Norder, H., Visona, K.A., and Magnius, L.O. 1997. Molecular epidemiology of hepatitis B virus in Central America reflected in the genetic variability of the small S gene. J. Infect. Dis. 176: 851-858.
3. Bancroft, W.H., Mondon, F.K., and Russell, P.K. 1972. Detection of additional antigenic determinants of hepatitis B antigen. J. Immunol. 109: 842-848.
4. Blitz, L., Pujol, F.H., Swenson, PD., Porto, L., Atencio, R., Araujo, M., Costa, L., Monsalve, D.C., Torres, J.R., Fields, H.A., Lambert, S., van Geyt, C., Norder, H., Magnius, L.O., Echevarria, J.M., and Stuyver, L. 1998. Antigenic diversity of hepatitis B virus strains of genotype F in Amerindians and other population groups from Venezuela. J. Clin. Microbiol. 36: 648-651.
5. Chen, S.-Y., Kao, C.-F., Chen, C.-M., Shih, C.-M., Hsu, M.-J., Chao, C.-H., Wang, S.-H., You, L.-R., and Lee, Y.-H.W. 2003. Mechanisms for inhibition of hepatitis B virus gene expression and replication by hepatitis C virus core protein. J. Biol. Chem. 278: 591-607.
6. Darmadi, S., Soetjipto, Handajani, R., Lusida, M.I., Soemarto, Sakugawa, H., Ishido, S., and Hotta, H. 1996. Hepatitis C virus infection-associated markers in sera from blood donors in Surabaya, Indonesia. Microbiol. Immunol. 40: 401-405.
7. Duraisamy, G., Zuridah, H., Ariffin, Y., and Kek, C.S. 1994. Hepatitis delta virus in intravenous drug users in Kuala Lumpur. Med. J. Malaysia 49: 212-216.
8. Hadiwandowo, S., Tsuda, F., Okamoto, H., Tokita, H., Wang, Y., Tanaka, T., Miyakawa, Y., and Mayumi, M. 1994. Hepatitis B virus subtypes and hepatitis C virus genotypes in patients with chronic liver disease or on maintenance hemodialysis in Indonesia. J. Med. Virol. 43: 182-186.
9. Hotta, H., Doi, H., Hayashi, T., Purwanta, M., Soemarto, W., Mizokami, M., Ohba, K., and Homma, M. 1994. Analysis of the core and E1 envelope region sequences of a novel variant of hepatitis C virus obtained in Indonesia. Arch. Virol. 136: 53-62.
10. Hotta, H., Handajani, R., Lusida, M.I., Soemarto, W., Doi, H., Miyajima, H., and Homma, M. 1994. Subtype analysis of hepatitis C virus in Indonesia on the basis of NS5b region sequences. J. Clin. Microbiol. 32: 3049-3051.
11. Kao, J.H. 2002. Hepatitis B viral genotypes: clinical relevance and molecular characteristics. J. Gastroenterol. Hepatol. 17: 643-650.
12. Kao, J.H., Chen, P.J., Lai, M.Y., and Chen, D.S. 2002. Clinical and virological aspects of blood donors infected with hepatitis B virus genotypes B and C. J. Clin. Microbiol. 40: 22-25.
13. Le Bouvier, G.L. 1971. The heterogeneity of Australia antigen. J. Infect. Dis. 123: 671-675.
14. Lindh, M., Andersson, A.-S., and Gusdal, A. 1997. Genotypes, nt 1858 variants, and geographic origin of hepatitis B virus: large-scale analysis using a new genotyping method. J. Infect. Dis. 175: 1285-1293.
15. Liu, C.J., Kao, J.H., Chen, P.J., Lai, M.Y., and Chen, D.S. 2002. Molecular epidemiology of hepatitis B viral serotypes and genotypes in Taiwan. J. Biomed. Sci. 9: 166-170.
16. Lok, A.S.F., and Chan, H.L.Y. 2000. Viral hepatitis B and D, p. 12.1-12.21. In O'Grady, J.G., Lake, J.R., and Howdle, P.D. (eds), Comprehensive clinical hepatology, Mosby, London, Edinburgh, New York, Toronto.
17. Lopez, J.B., Thambyrajah, V., Balasegaram, M., and Satgunasingam, N. 1994. Hepatitis markers in Malaysians with hepatocellular carcinoma. Br. J. Biomed. Sci. 51: 177-180.
18. Magnius, L.O., and Norder, H. 1995. Subtypes, genotypes and molecular epidemiology of the hepatitis B virus as reflected by sequence variability of the S-gene. Intervirology 38: 24-34.
19. Mbayed, V.A., Lopez, J.L., Telenta, P.F.S., Palacios, G., Badia, I., Ferro, A., Galoppo, C., and Campos, R. 1998. Distribution of hepatitis B virus genotypes in two different pediatric populations from Argentina. J. Clin. Microbiol. 36: 3362-3365.
20. Moriya, T., Kuramoto, I.K., Yoshizawa, H., and Holland, P.V. 2002. Distribution of hepatitis B virus genotypes among American blood donors determined with a preS2 epitope enzyme-linked immunosorbent assay kit. J. Clin. Microbiol. 40: 877-880.
21. Mulyanto, Tsuda, F., Karossi, A.T., Soewignjo, S., Roestamsjah, Sumarsidi, D., Trisnamurti, R.H., Sumardi, Surayah, Udin, L.Z., Melani-Wikanta, Kanai, K., and Mishiro, S. 1997. Distribution of the hepatitis B surface antigen subtypes in Indonesia: implications for ethnic heterogeneity and infection control measures. Arch. Virol. 142: 2121-2129.
22. Nakai, K., Win, K.M., Oo, S.S., Arakawa, Y., and Abe, K. 2001. Molecular characteristic-based epidemiology of hepatitis B, C, and E viruses and GB virus C/hepatitis G virus in Myanmar. J. Clin. Microbiol. 39: 1536-1539.
23. Norder, H., Courouce, A.M., and Magnius, L.O. 1994. Complete genomes, phylogenetic relatedness, and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes. Virology 198: 489-503.
24. Norder, H., Hammas, B., Lee, S.D., Bile, K., Courouce, A.M., Mushahwar, I.K., and Magnius, L.O. 1993. Genetic relatedness of hepatitis B viral strains of diverse geographical origin and natural variations in the primary structure of the surface antigen. J. Gen. Virol. 74: 1341-1348.
25. Okamoto, H., Tsuda, F., Sakugawa, H., Sastrosoewignjo, R.I., Imai, M., Miyakawa, Y., and Mayumi, M. 1988. Typing hepatitis B virus by homology in nucleotide sequence: comparison of surface antigen subtypes. J. Gen. Virol. 69: 2575-2583.
26. Orito, E., Ichida, T., Sakugawa, H., Sata, M., Horiike, N., Hino, K., Okita, K., Okanoue, T., Iino, S., Tanaka, E., Suzuki, K., Watanabe, H., Hige, S., and Mizokami, M. 2001. Geographic distribution of hepatitis B virus (HBV) genotype in patients with chronic HBV infection in Japan. Hepatology 34: 590-594.
27. Page, R.D. 1996. TreeView: an application to display phylogenetic trees on personal computers. Comput. Appl. Biosci. 12: 357-358.
28. Saat, Z., Sinniah, M., Kin, T.L., Baharuddin, R., and Krishnasamy, M. 1999. A four year review of acute viral hepatitis cases in the east coast of peninsular Malaysia (1994-1997). Southeast Asian J. Trop. Med. Public Health 30: 106-109.
29. Sakugawa, H., Nakasone, H., Shokita, H., Nakayoshi, T., Kinjo, F., Saito, A., Yamashiro, A., and Miyagi, Y. 1995. Seroepidemiological study of hepatitis delta virus infection in Okinawa, Japan. J. Med. Virol. 45: 312-315.
30. Sakugawa, H., Nakasone, H., Kawakami, Y., Adaniya, H., Mizushima, T., Nakayoshi, T., Kinjo, F., Saito, A., Zukeran, H., Miyagi, Y., Yakabi, S., Taira, M., Kinoshita, M., and Yamakawa, Y. 1997. Determination of hepatitis delta virus (HDV)-RNA in asymptomatic cases of HDV infection. Am. J. Gastroenterol. 92: 2232-2236.
31. Sastrosoewignjo, R.I., Sandjaja, B., and Okamoto, H. 1991. Molecular epidemiology of hepatitis B virus in Indonesia, J. Gastroenterol. Hepatol. 6: 491-498.
32. Schütler, C.G., Fiedler, N., Schmidt, K., Repp, R., Gerlich, W.H., and Schaefer, S. 2002. Suppression of hepatitis B virus enhancer 1 and 2 by hepatitis C virus core protein. J. Hepatol. 37: 855-862.
33. Shih, C.-M., Lo, S.J., Miyamura, T., Chen, S.-Y., and Lee, Y.-H.W. 1993. Suppression of hepatitis B virus expression and replication by hepatitis C virus core protein in HuH-7 cells. J. Virol. 67: 5823-5832.
34. Soetjipto, Handajani, R., Lusida, M.I., Darmadi, S., Adi, P., Soemarto, Ishido, S., Katayama, Y., and Hotta, H. 1996. Differential prevalence of hepatitis C virus subtypes in healthy blood donors, patients on maintenance hemodialysis, and patients with hepatocellular carcinoma in Surabaya, Indonesia. J. Clin. Microbiol. 34: 2875-2880.
35. Stuyver, L., De Gendt, S., Van Geyt, C., Zoulim, F., Fried, M., Schinazi, R.F., and Rossau, R. 2000. A new genotype of hepatitis B virus: complete genome and phylogenetic relatedness. J. Gen. Virol. 81: 67-74.
36. Sugauchi, F., Orito, E., Ichida, T., Kato, H., Sakugawa, H., Kakumu, S., Ishida, T., Chutaputti, A., Lai, C.-L., Ueda, R., Miyakawa, Y., and Mizokami, M. 2002. Hepatitis B virus of genotype B with or without recombination with genotype C over the precore region plus the core gene. J. Virol. 76: 5985-5992.
37. Swenson, P.D., Van Geyt, C., Alexander, E.R., Hagan, H., Freitag-Koontz, J.M., Wilson, S., Norder, H., Magnius, L.O., and Stuyver, L. 2001. Hepatitis B virus genotypes and HBsAg subtypes in refugees and injection drug users in the United States determined by LiPA and monoclonal EIA. J. Med. Virol. 64: 305-311.
38. Telenta, R.F.S., Poggio, G.P., Lopez, J.L., Gonzalez, J., Lemberg, A., and Campos, R.H. 1997. Increased prevalence of genotype F hepatitis B virus isolates in Buenos Aires, Argentina. J. Clin. Microbiol. 35: 1873-1875.
39. Tsubota, A., Arase, Y., Ren, F., Tanaka, H., Ikeda, K., and Kumada, H. 2001. Genotype may correlate with liver carcinogenesis and tumor characteristics in cirrhotic patients infected with hepatitis B virus subtype adw. J. Med. Virol. 65: 257-265.
40. Usuda, S., Okamoto, H., Iwanari, H., Baba, K., Tsuda, F., Miyakawa, Y., and Mayumi, M. 1999. Serological detection of hepatitis B virus genotypes by Elisa with monoclonal antibodies to type-specific epitopes in the preS2-region product. J. Virol. Methods 80: 97-112.
41. Vranckx, R., Reniers, J., Alisjahbana, A., Ngantung, W., Sugita, E., and Meheus, A. 1988. Prevalence of anti-delta antibodies in pregnant women in Bandung, Indonesia. Trop. Geogr. Med. 40: 17-19.
42. Yokosuka, O., Omata, M., Hosoda, K., Tada, M., Ehata, T., and Ohto, M. 1991. Detection and direct sequencing of hepatitis B virus genome by DNA amplification method. Gastroenterology 100: 175-181.