메뉴 건너뛰기




Volumn 26, Issue 11, 2004, Pages 1217-1224

Is there a functional link between gene interdigitation and multi-species conservation of synteny blocks?

Author keywords

[No Author keywords available]

Indexed keywords

CHROMOSOME STRUCTURE; CHROMOSOME TRANSLOCATION; ENHANCER REGION; GENE MUTATION; GENETIC CONSERVATION; HUMAN; HYPOTHESIS; NONHUMAN; PHYLOGENY; REVIEW; SYNTENY; TRANSCRIPTION REGULATION;

EID: 8844285951     PISSN: 02659247     EISSN: None     Source Type: Journal    
DOI: 10.1002/bies.20117     Document Type: Review
Times cited : (25)

References (40)
  • 1
    • 0027986806 scopus 로고
    • Evolution of number and morphology of mammalian chromosomes
    • Qumsiyeh MB. 1994. Evolution of number and morphology of mammalian chromosomes. J Hered 85:455-465.
    • (1994) J Hered , vol.85 , pp. 455-465
    • Qumsiyeh, M.B.1
  • 2
    • 0032478340 scopus 로고    scopus 로고
    • Comparative genetics in the grasses
    • Gale MD, Devos KM. 1998. Comparative genetics in the grasses. Proc Natl Acad Sci USA 95:1971-1974.
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 1971-1974
    • Gale, M.D.1    Devos, K.M.2
  • 3
    • 1842768393 scopus 로고    scopus 로고
    • Reconstructing the genomic architecture of ancestral mammals: Lessons from human, mouse, and rat genomes
    • Bourque G, Pevzner PA, Tesler G. 2004. Reconstructing the genomic architecture of ancestral mammals: lessons from human, mouse, and rat genomes. Genome Res 14:507-516.
    • (2004) Genome Res , vol.14 , pp. 507-516
    • Bourque, G.1    Pevzner, P.A.2    Tesler, G.3
  • 4
    • 0037264074 scopus 로고    scopus 로고
    • Genome rearrangements in mammalian evolution: Lessons from human and mouse genomes
    • Pevzner P, Tesler G. 2003. Genome rearrangements in mammalian evolution: lessons from human and mouse genomes. Genome Res 13:37-45.
    • (2003) Genome Res , vol.13 , pp. 37-45
    • Pevzner, P.1    Tesler, G.2
  • 5
    • 0035705158 scopus 로고    scopus 로고
    • Chromosome painting in farm, pet and wild animal species
    • Chowdhary BP, Raudsepp T. 2001. Chromosome painting in farm, pet and wild animal species. Methods Cell Sci 23:37-55.
    • (2001) Methods Cell Sci , vol.23 , pp. 37-55
    • Chowdhary, B.P.1    Raudsepp, T.2
  • 6
    • 0037351279 scopus 로고    scopus 로고
    • Genomic DNA insertions and deletions occur frequently between humans and nonhuman primates
    • Frazer KA, Chen X, Hinds DA, Pant PV, Patil N, et al. 2003. Genomic DNA insertions and deletions occur frequently between humans and nonhuman primates. Genome Res 13:341-346.
    • (2003) Genome Res , vol.13 , pp. 341-346
    • Frazer, K.A.1    Chen, X.2    Hinds, D.A.3    Pant, P.V.4    Patil, N.5
  • 8
    • 18344415274 scopus 로고    scopus 로고
    • Conservation of long-range synteny and microsynteny between the genomes of two distantly related nematodes
    • RESEARCH0057
    • Guiliano DB, Hall N, Jones SJ, Clark LN, Corton CH, et al. 2002. Conservation of long-range synteny and microsynteny between the genomes of two distantly related nematodes. Genome Biol 3:RESEARCH0057.
    • (2002) Genome Biol , vol.3
    • Guiliano, D.B.1    Hall, N.2    Jones, S.J.3    Clark, L.N.4    Corton, C.H.5
  • 9
    • 0035368857 scopus 로고    scopus 로고
    • Inversions and the dynamics of eukaryotic gene order
    • Huynen MA, Snel B, Bork P. 2001. Inversions and the dynamics of eukaryotic gene order. Trends Genet 17:304-306.
    • (2001) Trends Genet , vol.17 , pp. 304-306
    • Huynen, M.A.1    Snel, B.2    Bork, P.3
  • 11
    • 0037819447 scopus 로고    scopus 로고
    • Transcription regulation and animal diversity
    • Levine M, Tjian R. 2003. Transcription regulation and animal diversity. Nature 424:147-151.
    • (2003) Nature , vol.424 , pp. 147-151
    • Levine, M.1    Tjian, R.2
  • 13
    • 0035477093 scopus 로고    scopus 로고
    • Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs
    • Butler JE, Kadonaga JT. 2001. Enhancer-promoter specificity mediated by DPE or TATA core promoter motifs. Genes Dev 15:2515-2519.
    • (2001) Genes Dev , vol.15 , pp. 2515-2519
    • Butler, J.E.1    Kadonaga, J.T.2
  • 14
    • 0034049069 scopus 로고    scopus 로고
    • Glucose modulation of insulin mRNA levels is dependent on transcription factor PDX-1 and occurs independently of changes in intracellular Ca2+
    • Macfarlane WM, Shepherd RM, Cosgrove KE, James RF, Dunne MJ, et al. 2000. Glucose modulation of insulin mRNA levels is dependent on transcription factor PDX-1 and occurs independently of changes in intracellular Ca2+. Diabetes 49:418-423.
    • (2000) Diabetes , vol.49 , pp. 418-423
    • Macfarlane, W.M.1    Shepherd, R.M.2    Cosgrove, K.E.3    James, R.F.4    Dunne, M.J.5
  • 15
  • 17
    • 0042810698 scopus 로고    scopus 로고
    • A long-range Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly
    • Lettice LA, Heaney SJ, Purdie LA, Li L, de Beer, et al. 2003. A long-range Shh enhancer regulates expression in the developing limb and fin and is associated with preaxial polydactyly. Hum Mol Genet 12:1725-1735.
    • (2003) Hum Mol Genet , vol.12 , pp. 1725-1735
    • Lettice, L.A.1    Heaney, S.J.2    Purdie, L.A.3    Li, L.4    De Beer5
  • 18
    • 0036105591 scopus 로고    scopus 로고
    • rVista for comparative sequence-based discovery of functional transcription factor binding sites
    • doi
    • Loots GG, Ovcharenko I, Pachter L, Dubchak I, Rubin EM. 2002. rVista for comparative sequence-based discovery of functional transcription factor binding sites. Genome Res 12:832-839. [doi].
    • (2002) Genome Res , vol.12 , pp. 832-839
    • Loots, G.G.1    Ovcharenko, I.2    Pachter, L.3    Dubchak, I.4    Rubin, E.M.5
  • 19
    • 1642412760 scopus 로고    scopus 로고
    • Post-genomic approaches to exploring neuropeptide gene mis-expression in disease
    • MacKenzie A, Quinn JP. 2004. Post-genomic approaches to exploring neuropeptide gene mis-expression in disease. Neuropeptides 38:1-15.
    • (2004) Neuropeptides , vol.38 , pp. 1-15
    • MacKenzie, A.1    Quinn, J.P.2
  • 21
    • 0033815579 scopus 로고    scopus 로고
    • Co-repressors 2000
    • Burke LJ, Baniahmad A. 2000. Co-repressors 2000. Faseb J 14:1876-1888.
    • (2000) Faseb J , vol.14 , pp. 1876-1888
    • Burke, L.J.1    Baniahmad, A.2
  • 22
    • 0035849451 scopus 로고    scopus 로고
    • The 5′ boundary of the human apolipoprotein B chromatin domain in intestinal cells
    • Antes TJ, Namciu SJ, Fournier RE, Levy-Wilson B. 2001. The 5′ boundary of the human apolipoprotein B chromatin domain in intestinal cells. Biochemistry 40:6731-6742.
    • (2001) Biochemistry , vol.40 , pp. 6731-6742
    • Antes, T.J.1    Namciu, S.J.2    Fournier, R.E.3    Levy-Wilson, B.4
  • 23
    • 0031899366 scopus 로고    scopus 로고
    • Human matrix attachment regions insulate transgene expression from chromosomal position effects in Drosophila melanogaster
    • Namciu SJ, Blochlinger KB, Fournier RE. 1998. Human matrix attachment regions insulate transgene expression from chromosomal position effects in Drosophila melanogaster. Mol Cell Biol 18:2382-2391.
    • (1998) Mol Cell Biol , vol.18 , pp. 2382-2391
    • Namciu, S.J.1    Blochlinger, K.B.2    Fournier, R.E.3
  • 24
    • 0035895502 scopus 로고    scopus 로고
    • The human transcriptome map: Clustering of highly expressed genes in chromosomal domains
    • Caron H, van Schaik B, van der Mee M, Baas F, Riggins G, et al. 2001. The human transcriptome map: clustering of highly expressed genes in chromosomal domains. Science 291:1289-1292.
    • (2001) Science , vol.291 , pp. 1289-1292
    • Caron, H.1    Van Schaik, B.2    Van Der Mee, M.3    Baas, F.4    Riggins, G.5
  • 25
    • 0034616398 scopus 로고    scopus 로고
    • Identification of a coordinate regulator of interleukins 4, 13, and 5 by cross-species sequence comparisons
    • Loots GG, Locksley RM, Blankespoor CM, Wang ZE, Miller W, et al. 2000. Identification of a coordinate regulator of interleukins 4, 13, and 5 by cross-species sequence comparisons. Science 288:136-140.
    • (2000) Science , vol.288 , pp. 136-140
    • Loots, G.G.1    Locksley, R.M.2    Blankespoor, C.M.3    Wang, Z.E.4    Miller, W.5
  • 26
    • 0031752664 scopus 로고    scopus 로고
    • Vertebrate hox gene regulation: Clustering and/or colinearity?
    • Duboule D. 1998. Vertebrate hox gene regulation: clustering and/or colinearity? Curr Opin Genet Dev 8:514-518.
    • (1998) Curr Opin Genet Dev , vol.8 , pp. 514-518
    • Duboule, D.1
  • 27
    • 0038817801 scopus 로고    scopus 로고
    • Evolutionary conservation of regulatory elements in vertebrate hox gene clusters
    • Santini S, Boore JL, Meyer A. 2002. Evolutionary conservation of regulatory elements in vertebrate hox gene clusters. Genome Res 13:1111-1122.
    • (2002) Genome Res , vol.13 , pp. 1111-1122
    • Santini, S.1    Boore, J.L.2    Meyer, A.3
  • 28
  • 29
    • 0030878664 scopus 로고    scopus 로고
    • Fossils, genes and the evolution of animal limbs
    • Shubin N, Tabin C, Carroll S. 1997. Fossils, genes and the evolution of animal limbs. Nature 388:639-648.
    • (1997) Nature , vol.388 , pp. 639-648
    • Shubin, N.1    Tabin, C.2    Carroll, S.3
  • 31
    • 0038271921 scopus 로고    scopus 로고
    • Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution
    • Pevzner P, Tesler G. 2003. Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution. Proc Natl Acad Sci USA 100:7672-7677.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 7672-7677
    • Pevzner, P.1    Tesler, G.2
  • 32
    • 0032562789 scopus 로고    scopus 로고
    • Identification of regulatory regions which confer muscle-specific gene expression
    • Wasserman WW, Fickett JW. 1998. Identification of regulatory regions which confer muscle-specific gene expression. J Mol Biol 278:167-181.
    • (1998) J Mol Biol , vol.278 , pp. 167-181
    • Wasserman, W.W.1    Fickett, J.W.2
  • 33
    • 0038631908 scopus 로고    scopus 로고
    • In silico identification of metazoan transcriptional regulatory regions
    • Wasserman WW, Krivan W. 2003. In silico identification of metazoan transcriptional regulatory regions. Naturwissenschaften 90:156-166.
    • (2003) Naturwissenschaften , vol.90 , pp. 156-166
    • Wasserman, W.W.1    Krivan, W.2
  • 35
    • 0031081136 scopus 로고    scopus 로고
    • Stamatoyannopoulos G. Production of transgenic mice with yeast artificial chromosomes
    • Peterson KR, Clegg CH, Li Q. 1997. Stamatoyannopoulos G. Production of transgenic mice with yeast artificial chromosomes. Trends Genet 13:61-66.
    • (1997) Trends Genet , vol.13 , pp. 61-66
    • Peterson, K.R.1    Clegg, C.H.2    Li, Q.3
  • 36
    • 0036160869 scopus 로고    scopus 로고
    • A yeast artificial chromosome containing the human preprotachykinin - A gene expresses substance P in mice and drives appropriate marker gene expression during early brain embryogenesis
    • MacKenzie A, Quinn J. 2002. A yeast artificial chromosome containing the human preprotachykinin-A gene expresses substance P in mice and drives appropriate marker gene expression during early brain embryogenesis. Molecular and Cellular Neuroscience 19:72-87.
    • (2002) Molecular and Cellular Neuroscience , vol.19 , pp. 72-87
    • MacKenzie, A.1    Quinn, J.2
  • 37
    • 0034530364 scopus 로고    scopus 로고
    • The human preprotachykinin-A gene promoter has been highly conserved and can drive human-like marker gene expression in the adult mouse CNS
    • MacKenzie A, Payne C, Boyle S, Clarke AR, Quinn JP. 2000. The human preprotachykinin-A gene promoter has been highly conserved and can drive human-like marker gene expression in the adult mouse CNS. Mol Cell Neurosci 16:620-630.
    • (2000) Mol Cell Neurosci , vol.16 , pp. 620-630
    • MacKenzie, A.1    Payne, C.2    Boyle, S.3    Clarke, A.R.4    Quinn, J.P.5
  • 38
    • 8844276218 scopus 로고    scopus 로고
    • Targeting mutations into YACs by homologous recombination
    • Markie D, editor. Totowa, New Jersey: Humana press
    • Dulf K, Huxley C. 1996. Targeting mutations into YACs by homologous recombination. In: Markie D, editor. YAC protocols. Totowa, New Jersey: Humana press, p 187-198.
    • (1996) YAC Protocols , pp. 187-198
    • Dulf, K.1    Huxley, C.2
  • 39
    • 0037349438 scopus 로고    scopus 로고
    • Targeted deletion of a branchial arch-specific enhancer reveals a role of dHAND in craniofacial development
    • Yanagisawa H, Clouthier DE, Richardson JA, Charite J, Olson EN. 2003. Targeted deletion of a branchial arch-specific enhancer reveals a role of dHAND in craniofacial development. Development 130:1069-1078.
    • (2003) Development , vol.130 , pp. 1069-1078
    • Yanagisawa, H.1    Clouthier, D.E.2    Richardson, J.A.3    Charite, J.4    Olson, E.N.5
  • 40
    • 0037464547 scopus 로고    scopus 로고
    • Genetics and the making of Homo sapiens
    • Carroll SB. 2003. Genetics and the making of Homo sapiens. Nature 422:849-857.
    • (2003) Nature , vol.422 , pp. 849-857
    • Carroll, S.B.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.