Expression of alternatively spliced sodium channel α-subunit genes. Unique splicing patterns are observed in dorsal root ganglia

Journal of Biological Chemistry

Volumn 279, Issue 44, 2004, Pages 46234-46241

  Raymond, Christopher K ^a   Castle, John ^a   Garrett Engele, Philip ^a   Armour, Christopher D ^a   Kan, Zhengyan ^a   Tsinoremas, Nicholas ^a   Johnson, Jason M ^a  

^a ROSETTA INPHARMATICS   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCHEMISTRY; DNA; GENES; LIVING SYSTEMS STUDIES; MOLECULAR DYNAMICS; SODIUM; TISSUE;

DNA MICROARRAYS; DORSAL ROOT GANGLIA; GENOMIC SEQUENCES; MOLECULAR MEDICINES;

DRUG PRODUCTS;

SODIUM CHANNEL;

ALPHA CHAIN; ALTERNATIVE RNA SPLICING; ANIMAL MODEL; ANIMAL TISSUE; ARTICLE; CONTROLLED STUDY; DNA MICROARRAY; FEMALE; GENE EXPRESSION; HUMAN; MALE; MONKEY; MULTIGENE FAMILY; NEUROPATHIC PAIN; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RAT; SEQUENCE ANALYSIS; SPINAL GANGLION;

ALTERNATIVE SPLICING; AMINO ACID SEQUENCE; ANIMALS; BASE SEQUENCE; GANGLIA, SPINAL; HUMANS; MACACA FASCICULARIS; MOLECULAR SEQUENCE DATA; NERVE TISSUE PROTEINS; NEUROPEPTIDES; RATS; SODIUM CHANNELS;

ANIMALIA; MACACA FASCICULARIS; PRIMATES;

EID: 8544273283     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M406387200     Document Type: Article

References (35)

1. Thanaraj, T. A., Clark, F., and Muilu, J. (2003) Nucleic Acids Res. 31, 2544-2552
2. Modrek, B., and Lee, C. J. (2003) Nat. Genet. 34, 177-180
3. Kan, Z., Castle, J., Johnson, J. M., and Tsinoremas, N. F. (2004) Pac. Symp. Biocomput., 42-53
4. Kan, Z., States, D., and Gish, W. (2002) Genome Res. 12, 1837-1845
5. Johnson, J. M., Castle, J., Garrett-Engele, P., Kan, Z., Loerch, P. M., Armour, C. D., Santos, R., Schadt, E. E., Stoughton, R., and Shoemaker, D. D. (2003) Science 302, 2141-2144
6. Castle, J., Garrett-Engele, P., Armour, C. D., Duenwald, S. J., Loerch, P. M., Meyer, M. R., Schadt, E. E., Stoughton, R., Parrish, M. L., Shoemaker, D. D., and Johnson, J. M. (2003) Genome Biol. 4, R66
7. Catterall, W. A. (2000) Neuron 26, 13-25
8. Yu, F. H., and Catterall, W. A. (2003) Genome Biol. 4, 207
9. Goldin, A. L., Barchi, R. L., Caldwell, J. H., Hofmann, F., Howe, J. R., Hunter, J. C., Kallen, R. G., Mandel, G., Meisler, M. H., Netter, Y. B., Noda, M., Tamkun, M. M., Waxman, S. G., Wood, J. N., and Catterall, W. A. (2000) Neuron 28, 365-368
10. Plummer, N. W., and Meisler, M. H. (1999) Genomics 57, 323-331
11. Tan, J., Liu, Z., Nomura, Y., Goldin, A. L., and Dong, K. (2002) J. Neurosci. 22, 5300-5309
12. Dietrich, P. S., McGivern, J. G., Delgado, S. G., Koch, B. D., Eglen, R. M., Hunter, J. C., and Sangameswaran, L. (1998) J. Neurochem. 70, 2262-2272
13. Waxman, S. G., Cummins, T. R., Dib-Hajj, S. D., and Black, J. A. (2000) J. Rehabil. Res. Dev. 37, 517-528
14. Plummer, N. W., McBurney, M. W., and Meisler, M. H. (1997) J. Biol. Chem. 272, 24008-24015
15. Plummer, N. W., Galt, J., Jones, J. M., Burgess, D. L., Sprunger, L. K., Kohrman, D. C., and Meisler, M. H. (1998) Genomics 54, 287-296
16. Bell, T. J., Thaler, C., Castiglioni, A. J., Helton, T. D., and Lipscombe, D. (2004) Neuron 41, 127-138
17. Hughes, T. R., Mao, M., Jones, A. R., Burchard, J., Marton, M. J., Shannon, K. W., Lefkowitz, S. M., Ziman, M., Schelter, J. M., Meyer, M. R., Kobayashi, S., Davis, C., Dai, H., He, Y. D., Stephaniants, S. B., Cavet, G., Walker, W. L., West, A., Coffey, E., Shoemaker, D. D., Stoughton, R., Blanchard, A. P., Friend, S. H., and Linsley, P. S. (2001) Nat. Biotechnol. 19, 342-347
18. He, Y. D., Dai, H., Schadt, E. E., Cavet, G., Edwards, S. W., Stepaniants, S. B., Duenwald, S., Kleinhanz, R., Jones, A. R., Shoemaker, D. D., and Stoughton, R. B. (2003) Bioinformatics 19, 956-965
19. Zimmermann, M. (1983) Pain 16, 109-110
20. Wang, H., Sun, H., Della Penna, K., Benz, R. J., Xu, J., Gerhold, D. L., Holder, D. J., and Koblan, K. S. (2002) Neuroscience 114, 529-546
21. Hsiao, L. L., Dangond, F., Yoshida, T., Hong, R., Jensen, R. V., Misra, J., Dillon, W., Lee, K. F., Clark, K. E., Haverty, P., Weng, Z., Mutter, G. L., Frosch, M. P., Macdonald, M. E., Milford, E. L., Crum, C. P., Bueno, R., Pratt, R. E., Mahadevappa, M., Warrington, J. A., Stephanopoulos, G., and Gullans, S. R. (2001) Physiol. Genomics 7, 97-104
22. Su, A. I., Cooke, M. P., Ching, K. A., Hakak, Y., Walker, J. R., Wiltshire, T., Orth, A. P., Vega, R. G., Sapinoso, L. M., Moqrich, A., Patapoutian, A., Hampton, G. M., Schultz, P. G., and Hogenesch, J. B. (2002) Proc. Natl. Acad. Sci. U. S. A. 99, 4465-4470
23. Miyahara, T., Kikuchi, T., Akimoto, M., Kurokawa, T., Shibuki, H., and Yoshimura, N. (2003) Investig. Ophthalmol. Vis. Sci. 44, 4347-4356
24. Belcher, S. M., Zerillo, C. A., Levenson, R., Ritchie, J. M., and Howe, J. R. (1995) Proc. Natl. Acad. Sci. U. S. A. 92, 11034-11038
25. Dib-Hajj, S. D., Tyrrell, L., and Waxman, S. G. (2002) Mol. Neurobiol. 26, 235-250
26. Zimmer, T., Bollensdorff, C., Haufe, V., Birch-Hirschfeld, E., and Benndorf, K. (2002) Am. J. Physiol. Heart Circ. Physiol. 282, H1007-H1017
27. Kim, S. H., and Chung, J. M. (1992) Pain 50, 355-363
28. Dib-Hajj, S., Black, J. A., Felts, P., and Waxman, S. G. (1996) Proc. Natl. Acad. Sci. U. S. A. 93, 14950-14954
29. Dib-Hajj, S. D., Fjell, J., Cummins, T. R., Zheng, Z., Fried, K., LaMotte, R., Black, J. A., and Waxman, S. G. (1999) Pain 83, 591-600
30. Sleeper, A. A., Cummins, T. R., Dib-Hajj, S. D., Hormuzdiar, W., Tyrrell, L., Waxman, S. G., and Black, J. A. (2000) J. Neurosci. 20, 7279-7289
31. Sarao, R., Gupta, S. K., Auld, V. J., and Dunn, R. J. (1991) Nucleic Acids Res. 19, 5673-5679
32. Gustafson, T. A., Clevinger, E. C., O'Neill, T. J., Yarowsky, P. J., and Krueger, B. K. (1993) J. Biol. Chem. 268, 18648-18653
33. Auld, V. J., Goldin, A. L., Krafte, D. S., Catterall, W. A., Lester, H. A., Davidson, N., and Dunn, R. J. (1990) Proc. Natl. Acad. Sci. U. S. A. 87, 323-327
34. Schaller, K. L., Krzemien, D. M., McKenna, N. M., and Caldwell, J. H. (1992) J. Neurosci. 12, 1370-1381
35. Sangameswaran, L., Fish, L. M., Koch, B. D., Rabert, D. K., Delgado, S. G., Ilnicka, M., Jakeman, L. B., Novakovic, S., Wong, K., Sze, P., Tzoumaka, E., Stewart, G. R., Herman, R. C., Chan, H., Eglen, R. M., and Hunter, J. C. (1997) J. Biol. Chem. 272, 14805-14809