Evolution of densoviruses

Parvoviruses

Volumn , Issue , 2005, Pages 55-68

  Tijssen, P ^a   Bando, H ^b   Li, Y ^c   Jousset, F X ^c   Zadori Z ^d   Fediere G ^c   El Far, M ^d   Szelei, J ^d   Bergoin, M ^c  

^a INRS INSTITUT ARMAND FRAPPIER   (Canada)

^b HOKKAIDO UNIVERSITY   (Japan)

^c UNIV MONTPELLIER   (France)

^d UNIVERSITY OF QUEBEC   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 85145123048     PISSN: None     EISSN: None     Source Type: Book    
DOI: None     Document Type: Chapter

References (79)

1. Abd-Alla, A., Jousset, F.-X., Li, Y. et al. 2004. NS-3 protein of the Junonia coenia densovirus is essential for viral DNA replication in an Ld 652 cell line and Spodoptera littoralis larvae. Journal of Virology 78: 790-7.
2. Afanasiev, B. N., Galyov, E. E., Buchatsky, L. P. and Kozlov, Y. V. 1991. Nucleotide sequence and genomic organization of Aedes densonucleosis virus. Virology 185: 323-36.
3. Akam, M. 2000. Arthropods: developmental diversity within a (super) phylum. Proceedings National Academy of Sciences USA 97: 4438-41.
4. Astell, C. R., Mol, C. D. and Anderson, W. F. 1987. Structural and functional homology of parvovirus and papovavirus polypeptides. Journal General of Virology 68: 885-93.
5. Averof, M. and Akam, M. 1995. Hox genes and the diversification of insect and crustacean body plans. Nature 376: 420-3.
6. Bando, H., Nakagaki, M. and Kawase, S. 1983. Polyamines in densonucleosis virus from the silkworm, Bombyx mori. Journal Invertebrate Pathology42: 264-6.
7. Bando, H., Kondo, N. and Kawase, S. 1984. Molecular homology among the structural proteins of densonucleosis virus from silkworm, Bombyx mori. Archives of Virology 80: 209-18.
8. Bando, H., Choi, H., Ito, Y. and Kawase, S. 1990. Terminal structure of a Densovirus implies a hairpin transfer replication which is similar to the model for AAV. Virology 179: 57-63.
9. Bergoin, M. and Tijssen, P. 2000. Molecular biology of Densovirinae. In S. Faisst and J. Rommelaere (eds), Parvoviruses. From Molecular Biology to Pathology and Therapeutic Uses. Basel: Karger, pp. 12-32.
10. Berns, K. I., Bergoin, M., Bloom, M. et al. 2000. Family Parvoviridae. In: M. H. V. Van Regenmortel, C. M. Fauquet, D. H. L. Bishop et al. (eds), Virus Taxonomy: The Classification and Nomenclature of Viruses. Seventh report of the International Committee on Taxonomy of Viruses. San Diego: Academic Press, pp. 311-23.
11. Boore, J. L. 1999. Animal mitochondrial genomes. Nucleic Acids Research 27: 1767-80.
12. Boore, J. L., Collins, T. M., Stanton, D. et al. 1995. Deducing the pattern of arthropod phylogeny from mitochondrial DNA rearrangements. Nature 376: 163-5.
13. Boublik, Y., Jousset, F. X. and Bergoin, M. 1994. Complete nucleotide sequence and genomic organization of the Aedes albopictus parvovirus (AaPV) pathogenic for Aedes aegypti larvae. Virology 200: 752-63.
14. Calkhoven, C. F., Müller, C. and Leutz A. 2000. Translational control of C/EBPa and C/EBP|8 isoform expression. Genes Development 14: 1920-32.
15. Campos-Olivas, R., Louis, J. M., Clérot, D. et al. 2002. The structure of a replication initiator unites diverse aspects of nucleic metabolism. Proceedings National Academy of Sciences USA 99: 10310-15.
16. Charpentier, R. 1979. A nonoccluded virus in nymphs of the dragonfly Leucorrhina dubia (Odonata). Journal of Invertebrate Pathology 34: 95-8.
17. Chen, S., Cheng, L., Zhang, Q., Lin, W. et al. 2004. Genetic, biochemical, and structural characterization of a new densovirus isolated from a chronically infected Aedes albopictus C6/36 cell line. Virology 318: 123-33.
18. Cole, C. N. and Conzen, S. D. 2001. Polyomaviridae: the viruses and their replication. In: D. M. Knipe and P.M. Howley (eds), Fundamental Virology. Philadelphia: Lippincott Williams and Wilkins Publishers, pp. 985-1018.
19. Cook, C. E., Smith, M. L., Telford, M. J. et al. 2001. Hox genes and the phylogeny of the arthropods. CurrentBiology 11: 759-63.
20. Croizier, L., Jousset, F.-X., Veyrunes, J.-C. et al. 2000. Protein requirements for assembly of virus-like particles of Junonia coenia densovirus in insect cells. Journal of General Virology 81: 1605-13.
21. Dever, T. E. 2002. Gene-specific regulation by general translation factors. Cell 108: 545-56.
22. Ding, C., Urabe, M., Bergoin, M. and Kotin, R. M. 2002. Biochemical characterization of Junonia coenia densovirus nonstructural protein NS-1. Journal ofVirology 76: 338-45.
23. Dumas, B., Jourdan, M., Pascaud, A. M. and Bergoin, M. 1992. Complete nucleotide sequence of the cloned infectious genome of Junonia coenia densovirus reveals an organization unique among parvoviruses. Virology 191: 202-22.
24. Federici, B. A. 1976. Pathology and histochemistry of a densonucleosis virus in larvae of the blackfly Simulium vittatum. Proceedings 1st International Colloquium Invertebrate Pathology, Kingston (Canada), pp. 341-2.
25. Fédière, G. 2000. Epidemiology and pathology of Densovirinae. In: S. Faisst and J. Rommelaere (eds.), Parvoviruses. From Molecular Biology to Pathology and Therapeutic Uses. Basel: Karger, pp. 1-11.
26. Fédière, G., Li, Y., Zádori, Z. et al. 2002. Genome organization of Casphalia extraneadensovirus, a new Iteravirus. Virology 292: 299-308.
27. Fédière, G., El-Far M., Li, Y. et al. 2004. Expression strategy of densonucleosis virus from Mythimna loreyi. Virology 320: 181-9.
28. Friedrich, M. and Tautz, D. 1995. Ribosomal DNA phylogeny of the major extant arthropod classes and the evolution of myriapods. Nature 376: 165-7.
29. Garcia-Machado, E., Pempera, M., Dennebouy, N. et al. 1999. Mitochondrial genes collectively suggest the paraphyly of Crustacea with respect to Insecta. Journal of Molecular Evolution 49: 142-9.
30. Graveley, B. R. 2002. Sex, agility and the regulation of alternative splicing. Cell 109: 409-12.
31. Grignon, N. 1982. Recherches sur une infection virale chronique dans une lignée cellulaire de lépidoptères. Ph.D. thesis. Université de Montpellier II, 102 pp.
32. Guo, H., Zhang, J. and Hu, Y. 2000. Complete sequence and organization of Periplaneta fuliginosa densovirus genome. Acta Virologica 44: 315-22.
33. Hayakawa, T., Asano, S., Sahara, K. et al. 1997. Detection of replicative intermediate with closed terminus of Bombyx densonucleosis virus. Archives ofVirology 142: 393-9.
34. Hayakawa, T., Kojima, K., Nonaka, K. et al. 2000. Analysis of proteins encoded in the bipartite genome of a new type of parvo-like virus from silkworm-structural protein with DNA polymerase motif. Virus Research 66: 101-8.
35. Hellen, C. U. T. and Sarnow, P. 2001. Internal ribosome entry sites in eukaryotic mRNA molecules. Genes Development 15: 1593-612.
36. Jousset, F. X., Baquerizo, E. M. and Bergoin M. 2000. A new densovirus isolated from the mosquito Culexpipiens (Diptera: Culicidae). Virus Research 67: 11-16.
37. Jousset, F. X., Jourdan, M., Compagnon, B. et al. 1990. Restriction maps and sequence homologies of two densovirus genomes. Journal of General Virology 71: 2463-6.
38. Jousset, F. X., Barreau, C., Boublik, Y. et al. 1993. A parvo-like virus persistently infecting a C6/36 clone of Aedes albopictus mosquito cell line and pathogenic for Aedes aegypti larvae. Virus Research 29: 99-14.
39. Kaneda, S., Yura, T. and Yanagi, H. 2000. Production of three distinct mRNAs of 150 kDa oxygen-regulated protein (ORP150) by alternative promoters: preferential induction of one species under stress conditions. Journal ofBiochemistry 128: 529-38.
40. Kawase, S. 1985. Pathology associated with densoviruses. In: K. Maramorosch and K.E. Sherman (eds), Viral Insecticides for Biological Control. New York: Academic Press, pp. 197-231.
41. Kelly, D. C. and Elliott, R. M. 1977. Polyamines contained by two densonucleosis viruses. Journal of General Virology 21: 408-10.
42. Kelly, D. C., Ayres, M. D., Spencer, L. K. and Rivers C.F. 1980. Densonucleosis virus 3: a recent insect parvovirus isolated from Agraulis vanillae (Lepidoptera: Nymphalidae). Microbiologica 3: 224-35.
43. Kittayapong, P., Baisley, K. J. and O'Neill, S. L. 1999. A mosquito densovirus infecting Aedes aegypti and Aedes albopictus from Thailand. American Journal Tropical Medicine Hygiene 61: 612-17.
44. Kozak, M. 2002. Pushing the limits of the scanning mechanism for initiation of translation. Review. Gene 299: 1-34.
45. Lallena, M. J., Chalmers, K. J., Llamazares, S. et al. 2002. Splicing regulation at the second catalytic step by Sex-lethal involves 3' splice site recognition by SPF45. Cell 109: 285-96.
46. Lebedeva, O. P., Kuznetsova, M. A., Zelenko, A. P. et al. 1973. Investigation of a virus disease of the densonucleosis type in a laboratory culture of Aedes aegypti. Acta Virologica 3: 253-6.
47. Li, Y., Zádori, Z., Bando, H. et al. 2001. Genome organization of the densovirus from Bombyx mori (BmDNV-1) and enzyme activity of its capsid. Journal of General Virology 82: 2821-5.
48. Lightner, D. V., Redman, R. M. and Bell, T. A. 1983. Infectious hypodermal and hematopoietic necrosis virus, a newly recognized virus disease of penaeid shrimp. Journal ofInvertebrate Pathology 42: 62-70.
49. Meynardier, G., Vago, C., Plantevin, G. and Atger, P. 1964. Virose d'un type inhabituel chez le lépidoptère Galleria mellonella L. Revue deZoologie Agricole etAppliquée 63: 207 -9.
50. Meynardier, G., Amargier, A. and Genty, P. 1977. Une virose de type densonucléose chez le lépidoptère Sibine fusca. Oléagineux 32: 357-61.
51. Muralidhar, S., Becerra, S. P. and Rose, J. A. 1994. Site-directed mutagenesis of adeno-associated virus type 2 structural protein initiation codons: effects on regulation of synthesis and biological activity. Journal ofVirology 68: 170-6.
52. Nakagaki, M. and Kawase, S. 1980. Structural proteins of densonucleosis virus isolated from the silkworm, Bombyx mori, infected with the flacherie virus. Journal ofInvertebrate Pathology 36: 166-71.
53. Nardi, F., Spinsanti, G., Boore, J. L. et al. 2003. Hexapod origins: monophyletic or paraphyletic. Science 299: 1887-9 (see also comments in Science 299: 1854 and 301: 1482).
54. O'Neill, S. L., Kattayapong, P., Braig, H. R. etal. 1995. Insect densoviruses may be widespread in mosquito cell lines. Journal of General Virology 76: 2067-74.
55. Roekring, S., Nielsen, L., Owens, L. et al. 2002. Comparison of penaeid shrimp and insect parvoviruses suggests that viral transfers may occur between two distantly related arthropod groups. Virus Research 87: 79-87.
56. Rossmann, M. G. and Tao, Y. 1999. Structural insight into insect viruses. Nature Structural Biology 6: 717-19.
57. Rwegoshora R., Baisley, K. and Kattayapong, P. 2000. Seasonal and spatial variation in natural densovirus infection in Anopheles minimus. S.L. in Thailand. SoutheastAsian Journal Tropical Medicine Public Health 21: 3-9.
58. Sedman, S. A., Gelembiuk, G. W. and Mertz, J. E. 1990. Translation initiation at a downstream AUG occurs with increased efficiency when the upstream AUG is located very close to the 5' cap. Journal of Virology 64: 453-7.
59. Shike, H., Dhar, A. K., Burns, J. C. et al. 2000. Infectious hypodermal and hematopoietic necrosis virus of shrimp is related to mosquito Brevidensoviruses. Virology 277: 167-77.
60. Simpson, A. A., Chipman, P. R., Baker, T. S. et al. 1998. The structure of an insect parvovirus (Galleria mellonella densovirus) at 3.7 A resolution. Structure 15: 1355-67.
61. Simpson, A. A., Hébert, B., Sullivan, G. M. et al. 2002. The structure of porcine parvovirus: comparison with related viruses. Journal of Molecular Biology 315: 1189-98.
62. Smith, C. W. and Valcárel, J. 2000. Alternative pre-mRNA splicing: the logic of combinatorial control. Trends in BiochemicalSciences 25: 381-8.
63. Spotts, G. D., Patel, S. V., Xiao, Q. and Hann, S. R. 1997. Identification of downstream-initiated c-myc proteins which are dominant- negative inhibitors of transactivation by full-length c-myc proteins. Molecular Cellular Biology 17: 1459-68.
64. Strausfeld, N. J. 1998. Crustacean-insect relationships: the use of brain characters to derive phylogeny amongst segmented invertebrates. Brain Behavior and Evolution 52: 186-206.
65. Sun, F. L., Ma, G. H. and Chen, M. S. 1981. A new insect virus of Pieris rapae L.I. Isolation and characterization of the virus. Acta Microbiologica Sinica 21: 41-4.
66. Sutter, G. R. 1973. A nonoccluded virus of the army cutworm. Journal ofInvertebrate Pathology 21: 62-70.
67. Tattersall, P., Bergoin, M., Bloom, M. E. et al. 2005. Parvoviridae. In: Fauquet, C. M., Mayo, M. A., Maniloff, J., Desselberger, U. and Ball, L. A. (eds), Virus Taxonomy, VIIIth Report of the ICTV. London: Elsevier/Academic Press, pp. 353-69.
68. Thao, M. L., Wineriter, S., Buckingham, G. and Baumann, P. 2001. Genetic characterization of a putative Densovirus from the mealybug Planococcus citri. Current Microbiology 43: 457-8.
69. Thompson, J. D., Higgins, D. G. and Gibson, T. J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. NucleicAcids Research 22: 4673-80.
70. Tijssen, P. and Bergoin, M. 1995. Densonucleosis viruses constitute an increasingly diversified subfamily among the parvoviruses. Seminars in Virology 6: 347-55.
71. Tijssen, P. and Kurstak, E. 1981. Biochemical, biophysical, and biological properties of densonucleosis virus (parvovirus). III. Common sequences of structural proteins. Journal of Virology 37: 17-23.
72. Tijssen, P., van den Hurk, J. and Kurstak, E. 1976. Biochemical, biophysical, and biological properties of densonucleosis virus.I. Structural proteins. JournalofVirology 17: 686-91.
73. Tijssen, P., Li, Y., El-Far, M. et al. 2003. Organization and expression strategy of the ambisense genome of densonucleosis virus of Galleria mellonella. Journal ofVirology 77: 10357-65.
74. van Munster, M., Dullemans, A. M., Verbeek, M. et al. 2003. A new virus infecting Myzus persicae has a genome organization similar to the species of the genus Densovirus. Journal of General Virology 84: 165-72.
75. Ward, T. W., Kimmick, M. W., Afanasiev, B. N. et al. 2001. Characterization of the structural gene promoter of Aedes aegypti densovirus. Journal ofVirology 75: 1325-31.
76. Willwand, K., Moroianu, A., Horlein, R. et al. 2002. Specific interaction of the nonstructural protein NS1 of minute virus of mice (MVM) with (ACCA)2 motifs in the centre of the right-end MVM DNA palindrome to be required for NS1 binding in order to induce hairpin-primed viral DNA replication. Journal of General Virology 83: 1659-64.
77. Yamagishi, J., Hu Y., Zheng J. et al. 1999. Genome organization and mRNA structure of Periplaneta fuliginosa densovirus imply alternative splicing involvement in viral gene expression. Archives ofVirology 144: 2111-24.
78. Yueh, A. and Schneider, R. J. 2000. Translation by ribosome shunting on adenovirus and hsp70 mRNAs facilitated by complementarity to 18S rRNA. Genes Development 14: 414-21.
79. Zádori, Z., Szelei, J., Lacoste, M.-C. et al. 2001. A viral phospholipase A2 is required for parvovirus infectivity. Developmental Cell 1: 291-302