-
2
-
-
0033518234
-
From molecular to modular cell biology
-
Hartwell, L.H., Hopfield, J.J., Leibler, S. and Murray, A.W. (1999). From molecular to modular cell biology. Nature. 402, C47-52.
-
(1999)
Nature
, vol.402
, pp. C47-52
-
-
Hartwell, L.H.1
Hopfield, J.J.2
Leibler, S.3
Murray, A.W.4
-
3
-
-
0035826155
-
Exploring complex networks
-
Strogatz, S.H. (2001). Exploring complex networks. Nature. 410, 268-276.
-
(2001)
Nature.
, vol.410
, pp. 268-276
-
-
Strogatz, S.H.1
-
8
-
-
0034667684
-
Plasticity, evolvability, and modularity in RNA
-
Ancel, L.W. and Fontana, W. (2000). Plasticity, evolvability, and modularity in RNA. J Exp Zool. 288, 242-283.
-
(2000)
J Exp Zool.
, vol.288
, pp. 242-283
-
-
Ancel, L.W.1
Fontana, W.2
-
9
-
-
0023766090
-
The functional logic of cortical connections
-
Zeki, S. and Shipp, S. (1988). The functional logic of cortical connections. Nature. 335, 311-317.
-
(1988)
Nature.
, vol.335
, pp. 311-317
-
-
Zeki, S.1
Shipp, S.2
-
10
-
-
0037086147
-
Common Pattern Formation, Modularity and Phase Transitions in a Gene Network Model of Morphogenesis
-
Solé, R.V., Salazar-Ciudad, I. and García-Fernandez, J. (2002). Common Pattern Formation, Modularity and Phase Transitions in a Gene Network Model of Morphogenesis. Physica A. 305, 640-647.
-
(2002)
Physica A.
, vol.305
, pp. 640-647
-
-
Solé, R.V.1
Salazar-Ciudad, I.2
García-Fernandez, J.3
-
11
-
-
0033573244
-
Modularity in animal development and evolution:Elements of a conceptual framework for EvoDevo
-
Dassow, G. and Munro, E. (1999). Modularity in animal development and evolution:elements of a conceptual framework for EvoDevo. J Exp Zool. (Mol. Dev. Evol.). 285, 307-32.
-
(1999)
J Exp Zool. (Mol. Dev. Evol.).
, vol.285
, pp. 307-332
-
-
Dassow, G.1
Munro, E.2
-
12
-
-
0037199968
-
Hierarchical organization of modularity in metabolic networks
-
Ravasz, E., Somera, A.L., Mongru, D.A., Oltvai, Z.N. and Barabasi, A.L. (2002). Hierarchical organization of modularity in metabolic networks. Science. 297, 1551-1555.
-
(2002)
Science.
, vol.297
, pp. 1551-1555
-
-
Ravasz, E.1
Somera, A.L.2
Mongru, D.A.3
Oltvai, Z.N.4
Barabasi, A.L.5
-
14
-
-
27244446886
-
Network motif in computational graph: A case study in software architecture
-
Valverde, S. and Solé, R.V. (2005). Network motif in computational graph: A case study in software architecture. Phys Rev E. 72, 026107.
-
(2005)
Phys Rev E.
, vol.72
, pp. 026107
-
-
Valverde, S.1
Solé, R.V.2
-
15
-
-
0035475793
-
Topology of technology graphs:Small world patterns in electronic circuits
-
Cancho, R.F., Janssen, C., and Solé, R.V. (2001). Topology of technology graphs:Small world patterns in electronic circuits. Phys Rev E. 64, 046119.
-
(2001)
Phys Rev E.
, vol.64
, pp. 046119
-
-
Cancho, R.F.1
Janssen, C.2
Solé, R.V.3
-
16
-
-
0029661332
-
Complex Adaptations and the Evolution of Evolvability
-
Wagner, G.P. and Altenberg, L. (1996). Complex Adaptations and the Evolution of Evolvability. Evolution. 50, 967-976.
-
(1996)
Evolution.
, vol.50
, pp. 967-976
-
-
Wagner, G.P.1
Altenberg, L.2
-
17
-
-
0035930008
-
The topology of the possible: Formal spaces underlying patterns of evolutionary change
-
Stadler, B.M., Stadler, P.F., Wagner, G.P. and Fontana, W. (2001). The topology of the possible: formal spaces underlying patterns of evolutionary change. J Theor Biol. 213, 241-274.
-
(2001)
J Theor Biol.
, vol.213
, pp. 241-274
-
-
Stadler, B.M.1
Stadler, P.F.2
Wagner, G.P.3
Fontana, W.4
-
18
-
-
0017771466
-
Evolution as tinkering
-
Jacob, F. (1976). Evolution as tinkering. Science. 196, 1161-1166.
-
(1976)
Science.
, vol.196
, pp. 1161-1166
-
-
Jacob, F.1
-
19
-
-
0032006747
-
The evolution of ‘bricolage’
-
Duboule, D. and Wilkins, A.S. (1998). The evolution of ‘bricolage’. TIG, 14: 54-59.
-
(1998)
TIG
, vol.14
, pp. 54-59
-
-
Duboule, D.1
Wilkins, A.S.2
-
20
-
-
85040474279
-
Selection, Tinkering and Emergence in Complex Networks
-
Solé, R.V., Ferrer, R., Montoya, J.M. and Valverde, S. (2002). Selection, Tinkering and Emergence in Complex Networks. Complexity. 8, 20-33.
-
(2002)
Complexity.
, vol.8
, pp. 20-33
-
-
Solé, R.V.1
Ferrer, R.2
Montoya, J.M.3
Valverde, S.4
-
21
-
-
0034608807
-
Taming combinatorial explosion
-
Schuster, P. (2000). Taming combinatorial explosion. Proc Natl Acad Sci U.S.A. 97, 7678-7680.
-
(2000)
Proc Natl Acad Sci U.S.A.
, vol.97
, pp. 7678-7680
-
-
Schuster, P.1
-
22
-
-
0038483826
-
Emergence of scaling in random networks
-
Barabasi, A.L. and Albert, R. (1999). Emergence of scaling in random networks. Science. 286, 509-512.
-
(1999)
Science.
, vol.286
, pp. 509-512
-
-
Barabasi, A.L.1
Albert, R.2
-
23
-
-
0026085274
-
Protein modules
-
Baron, M., Norman, D.G. and Campbell, I.D. (1991). Protein modules. Trends Biochem Sci. 16, 13-17.
-
(1991)
Trends Biochem Sci.
, vol.16
, pp. 13-17
-
-
Baron, M.1
Norman, D.G.2
Campbell, I.D.3
-
24
-
-
0028218683
-
Modular arrangement of proteins as inferred from analysis of homology
-
Sonnhammer, E.L. and Kahn, D. (1994). Modular arrangement of proteins as inferred from analysis of homology. Protein Sci. 3, 482-492.
-
(1994)
Protein Sci.
, vol.3
, pp. 482-492
-
-
Sonnhammer, E.L.1
Kahn, D.2
-
26
-
-
34250841962
-
Graphs as models of large-scale biochemical organization
-
In: D. Bonchev and D.H. Rouvray (eds.), New York: Springer
-
Fernández, P. and Solé, R.V. (2005). Graphs as models of large-scale biochemical organization. In: D. Bonchev and D.H. Rouvray (eds.), Complexity in Chemistry, Biology, and Ecology. New York: Springer.
-
(2005)
Complexity in Chemistry, Biology, and Ecology
-
-
Fernández, P.1
Solé, R.V.2
-
27
-
-
85115976889
-
-
FEBS journal, submitted
-
Rodriguez-Caso, C., Medina, M.A. and Solé, R.V. Topology, Tinkering and evolution of the human transcription factor network. FEBS journal, submitted.
-
Tinkering and evolution of the human transcription factor network
-
-
Rodriguez-Caso, C.1
Medina, M.A.2
Topology, S.R.V.3
-
28
-
-
0742305866
-
Network biology: Understanding the cell’s functional organization
-
Barabasi, A.L. and Oltvai, Z.N. (2004). Network biology: understanding the cell’s functional organization. Nat Rev Genet. 5, 101-113.
-
(2004)
Nat Rev Genet.
, vol.5
, pp. 101-113
-
-
Barabasi, A.L.1
Oltvai, Z.N.2
-
29
-
-
0035974798
-
Achilles’ heel of cancer?
-
Vogelstein, B. and Kinzler, K.W. (2001). Achilles’ heel of cancer? Nature. 412, 865-866.
-
(2001)
Nature
, vol.412
, pp. 865-866
-
-
Vogelstein, B.1
Kinzler, K.W.2
-
30
-
-
0037012880
-
Specificity and stability in topology of protein networks
-
Maslov, S. and Sneppen, K. (2002). Specificity and stability in topology of protein networks. Science. 296. 910-913.
-
(2002)
Science
, vol.296
, pp. 910-913
-
-
Maslov, S.1
Sneppen, K.2
-
31
-
-
0035904463
-
Function and regulation of the transcription factors of the Myc/Max/Mad network
-
Luscher, B. (2001). Function and regulation of the transcription factors of the Myc/Max/Mad network. Gene. 277, 1-14.
-
(2001)
Gene.
, vol.277
, pp. 1-14
-
-
Luscher, B.1
-
32
-
-
0031008399
-
A natural classification of the basic helixloop- helix class of transcription factors
-
Atchley, W.R. and Fitch, W.M. (1997). A natural classification of the basic helixloop- helix class of transcription factors. Proc Natl Acad Sci U.S.A. 94, 5172-5176.
-
(1997)
Proc Natl Acad Sci U.S.A.
, vol.94
, pp. 5172-5176
-
-
Atchley, W.R.1
Fitch, W.M.2
-
34
-
-
0027662103
-
Hetero- and homodimeric receptors in thyroid hormone and vitamin A action
-
Zhang, X.K. and Pfahl, M. (1993). Hetero- and homodimeric receptors in thyroid hormone and vitamin A action. Receptor. 3, 183-191.
-
(1993)
Receptor.
, vol.3
, pp. 183-191
-
-
Zhang, X.K.1
Pfahl, M.2
-
35
-
-
0002638056
-
A model of large-scale proteome evolution
-
Sole, R.V., Pastor-Satorras, R., Smith, E. D. and Kepler, T. (2002). A model of large-scale proteome evolution. Adv. Complex Systems. 43-54.
-
(2002)
Adv. Complex Systems
, pp. 43-54
-
-
Sole, R.V.1
Pastor-Satorras, R.2
Smith, E.D.3
Kepler, T.4
-
36
-
-
0037460091
-
Evolving protein interaction networks through gene duplication
-
Pastor-Satorras, R., Smith, E., and Sole, R.V. (2003). Evolving protein interaction networks through gene duplication. J Theor Biol. 222, 199-210.
-
(2003)
J Theor Biol.
, vol.222
, pp. 199-210
-
-
Pastor-Satorras, R.1
Smith, E.2
Sole, R.V.3
-
37
-
-
0032751751
-
Evolution of bHLH transcription factors: Modular evolution by domain shuffling?
-
Morgenstern, B. and Atchley, W.R. (1999). Evolution of bHLH transcription factors: modular evolution by domain shuffling? Mol Biol Evol. 16, 1654-1663.
-
(1999)
Mol Biol Evol.
, vol.16
, pp. 1654-1663
-
-
Morgenstern, B.1
Atchley, W.R.2
-
38
-
-
0031451570
-
Evolution of the nuclear receptor superfamily: Early diversification from an ancestral orphan receptor
-
Laudet, V. (1997). Evolution of the nuclear receptor superfamily: early diversification from an ancestral orphan receptor. J Mol Endocrinol. 19, 207-226.
-
(1997)
J Mol Endocrinol.
, vol.19
, pp. 207-226
-
-
Laudet, V.1
-
39
-
-
36348947993
-
Modularity from fluctuations in random graphs and complex networks
-
Guimera, R., Sales-Pardo, M. and A., N.A. L. (2004). Modularity from fluctuations in random graphs and complex networks. Phys Rev E. 70, 025101.
-
(2004)
Phys Rev E.
, vol.70
, pp. 025101
-
-
Guimera, R.1
Sales-Pardo, M.2
-
40
-
-
0037086147
-
Common Pattern Formation, Modularity and Phase Transitions in a Gene Network Model of Morphogenesis
-
Solé, R.V., Salazar-Ciudad, I., and García-Fernandez, J. (2002). Common Pattern Formation, Modularity and Phase Transitions in a Gene Network Model of Morphogenesis. Physica A. 305, 640-647.
-
(2002)
Physica A.
, vol.305
, pp. 640-647
-
-
Solé, R.V.1
Salazar-Ciudad, I.2
García-Fernandez, J.3
|