메뉴 건너뛰기




Volumn 21, Issue 2, 2019, Pages 303-310

Clinical genome sequencing in an unbiased pediatric cohort

Author keywords

Clinical validation; Diagnostics; Genome sequencing; Insurance reimbursement; Next generation sequencing

Indexed keywords

ARTICLE; CHILD; DIAGNOSIS; ELECTRONIC MEDICAL RECORD; FEMALE; GENE DELETION; GOVERNMENT; HOSPITAL PATIENT; HUMAN; INFORMATION RETRIEVAL; MAJOR CLINICAL STUDY; MALE; MEDICAL RECORD REVIEW; NEXT GENERATION SEQUENCING; OUTPATIENT; REIMBURSEMENT; RETROSPECTIVE STUDY; VALIDATION PROCESS; WHOLE EXOME SEQUENCING; COHORT ANALYSIS; DIAGNOSTIC TEST; DNA SEQUENCE; ECONOMICS; ELECTRONIC HEALTH RECORD; GENETIC DISORDER; GENETIC SCREENING; HUMAN GENOME; PHENOTYPE; VALIDATION STUDY;

EID: 85049905337     PISSN: 10983600     EISSN: 15300366     Source Type: Journal    
DOI: 10.1038/s41436-018-0075-8     Document Type: Review
Times cited : (36)

References (23)
  • 1
    • 84915803267 scopus 로고    scopus 로고
    • Effectiveness of exome and genome sequencing guided by acuity of illness for diagnosis of neurodevelopmental disorders
    • Soden SE, Saunders CJ, Willig LK, et al. Effectiveness of exome and genome sequencing guided by acuity of illness for diagnosis of neurodevelopmental disorders. Sci Transl Med. 2014;6:265ra168.
    • (2014) Sci Transl Med , vol.6 , pp. 265ra168
    • Soden, S.E.1    Saunders, C.J.2    Willig, L.K.3
  • 2
    • 84867214350 scopus 로고    scopus 로고
    • Rapid whole-genome sequencing for genetic disease diagnosis in neonatal intensive care units
    • Saunders CJ, Miller NA, Soden SE, et al. Rapid whole-genome sequencing for genetic disease diagnosis in neonatal intensive care units. Sci Transl Med. 2012;4:154ra135.
    • (2012) Sci Transl Med , vol.4 , pp. 154ra135
    • Saunders, C.J.1    Miller, N.A.2    Soden, S.E.3
  • 4
    • 85040529028 scopus 로고    scopus 로고
    • Phenotypic analysis of clinical narratives using Human Phenotype Ontology
    • PID: 29295162
    • Shen F, Wang L, Liu H. Phenotypic analysis of clinical narratives using Human Phenotype Ontology. Stud Health Technol Inform. 2017;245:581–5.
    • (2017) Stud Health Technol Inform , vol.245 , pp. 581-585
    • Shen, F.1    Wang, L.2    Liu, H.3
  • 5
    • 84929026065 scopus 로고    scopus 로고
    • Whole-genome sequencing for identification of Mendelian disorders in critically ill infants: a retrospective analysis of diagnostic and clinical findings
    • COI: 1:CAS:528:DC%2BC2MXnt1ersb0%3D
    • Willig LK, Petrikin JE, Smith LD, et al. Whole-genome sequencing for identification of Mendelian disorders in critically ill infants: a retrospective analysis of diagnostic and clinical findings. Lancet Respir Med. 2015;3:377–87.
    • (2015) Lancet Respir Med , vol.3 , pp. 377-387
    • Willig, L.K.1    Petrikin, J.E.2    Smith, L.D.3
  • 6
    • 85042214139 scopus 로고    scopus 로고
    • The NSIGHT1-randomized controlled trial: rapid whole-genome sequencing for accelerated etiologic diagnosis in critically ill infants
    • Petrikin JE, Cakici JA, Clark MM, et al. The NSIGHT1-randomized controlled trial: rapid whole-genome sequencing for accelerated etiologic diagnosis in critically ill infants. NPJ Genom Med. 2018;3:6.
    • (2018) NPJ Genom Med , vol.3 , pp. 6
    • Petrikin, J.E.1    Cakici, J.A.2    Clark, M.M.3
  • 7
    • 84928209346 scopus 로고    scopus 로고
    • Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology
    • Richards S, Aziz N, Bale S, et al. Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology. Genet Med. 2015;17:405–24.
    • (2015) Genet Med , vol.17 , pp. 405-424
    • Richards, S.1    Aziz, N.2    Bale, S.3
  • 8
    • 84880535720 scopus 로고    scopus 로고
    • ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing
    • COI: 1:CAS:528:DC%2BC3sXhtVKku73K
    • Green RC, Berg JS, Grody WW, et al. ACMG recommendations for reporting of incidental findings in clinical exome and genome sequencing. Genet Med. 2013;15:565–74.
    • (2013) Genet Med , vol.15 , pp. 565-574
    • Green, R.C.1    Berg, J.S.2    Grody, W.W.3
  • 9
    • 85011835129 scopus 로고    scopus 로고
    • Recommendations for reporting of secondary findings in clinical exome and genome sequencing, 2016 update (ACMG SFv2.0): a policy statement of the American College of Medical Genetics and Genomics
    • Kalia SS, Adelman K, Bale SJ, et al. Recommendations for reporting of secondary findings in clinical exome and genome sequencing, 2016 update (ACMG SFv2.0): a policy statement of the American College of Medical Genetics and Genomics. Genet Med. 2017;19:249–55.
    • (2017) Genet Med , vol.19 , pp. 249-255
    • Kalia, S.S.1    Adelman, K.2    Bale, S.J.3
  • 10
    • 85039553339 scopus 로고    scopus 로고
    • Arthrogryposis and pterygia as lethal end manifestations of genetically defined congenital myopathies
    • COI: 1:CAS:528:DC%2BC1cXhtlKntbc%3D
    • Ahmed AA, Skaria P, Safina NP, et al. Arthrogryposis and pterygia as lethal end manifestations of genetically defined congenital myopathies. Am J Med Genet A. 2018;176:359–67.
    • (2018) Am J Med Genet A , vol.176 , pp. 359-367
    • Ahmed, A.A.1    Skaria, P.2    Safina, N.P.3
  • 11
    • 84991254153 scopus 로고    scopus 로고
    • Recurrent de novo BICD2 mutation associated with arthrogryposis multiplex congenita and bilateral perisylvian polymicrogyria
    • Ravenscroft G, Di Donato N, Hahn G, et al. Recurrent de novo BICD2 mutation associated with arthrogryposis multiplex congenita and bilateral perisylvian polymicrogyria. Neuromuscul Disord. 2016;26:744–8.
    • (2016) Neuromuscul Disord , vol.26 , pp. 744-748
    • Ravenscroft, G.1    Di Donato, N.2    Hahn, G.3
  • 12
    • 85027028242 scopus 로고    scopus 로고
    • Phenotypic extremes of BICD2-opathies: from lethal, congenital muscular atrophy with arthrogryposis to asymptomatic with subclinical features
    • COI: 1:CAS:528:DC%2BC2sXhtVChs7jN
    • Storbeck M, Horsberg Eriksen B, Unger A, et al. Phenotypic extremes of BICD2-opathies: from lethal, congenital muscular atrophy with arthrogryposis to asymptomatic with subclinical features. Eur J Hum Genet. 2017;25:1040–8.
    • (2017) Eur J Hum Genet , vol.25 , pp. 1040-1048
    • Storbeck, M.1    Horsberg Eriksen, B.2    Unger, A.3
  • 13
    • 84885785987 scopus 로고    scopus 로고
    • Clinical whole-exome sequencing for the diagnosis of mendelian disorders
    • COI: 1:CAS:528:DC%2BC3sXhs1Cgsb3P
    • Yang Y, Muzny DM, Reid JG, et al. Clinical whole-exome sequencing for the diagnosis of mendelian disorders. N Engl J Med. 2013;369:1502–11.
    • (2013) N Engl J Med , vol.369 , pp. 1502-1511
    • Yang, Y.1    Muzny, D.M.2    Reid, J.G.3
  • 14
    • 84918840439 scopus 로고    scopus 로고
    • Clinical exome sequencing for genetic identification of rare Mendelian disorders
    • Lee H, Deignan JL, Dorrani N, et al. Clinical exome sequencing for genetic identification of rare Mendelian disorders. JAMA. 2014;312:1880–7.
    • (2014) JAMA , vol.312 , pp. 1880-1887
    • Lee, H.1    Deignan, J.L.2    Dorrani, N.3
  • 15
    • 84946084988 scopus 로고    scopus 로고
    • Clinical impact and cost-effectiveness of whole exome sequencing as a diagnostic tool: a pediatric center’s experience
    • Valencia CA, Husami A, Holle J, et al. Clinical impact and cost-effectiveness of whole exome sequencing as a diagnostic tool: a pediatric center’s experience. Front Pediatr. 2015;3:67.
    • (2015) Front Pediatr , vol.3 , pp. 67
    • Valencia, C.A.1    Husami, A.2    Holle, J.3
  • 16
    • 85039709174 scopus 로고    scopus 로고
    • Improved diagnostic yield compared with targeted gene sequencing panels suggests a role for whole-genome sequencing as a first-tier genetic test
    • Lionel AC, Costain G, Monfared N, et al. Improved diagnostic yield compared with targeted gene sequencing panels suggests a role for whole-genome sequencing as a first-tier genetic test. Genet Med. 2017;20:435–43.
    • (2017) Genet Med , vol.20 , pp. 435-443
    • Lionel, A.C.1    Costain, G.2    Monfared, N.3
  • 17
    • 84959269956 scopus 로고    scopus 로고
    • Diagnostic exome sequencing for patients with a family history of consanguinity: over 38% of positive results are not autosomal recessive pattern
    • COI: 1:CAS:528:DC%2BC28XjsFGrs7Y%3D
    • Powis Z, Farwell KD, Alamillo CL, et al. Diagnostic exome sequencing for patients with a family history of consanguinity: over 38% of positive results are not autosomal recessive pattern. J Hum Genet. 2016;61:173–5.
    • (2016) J Hum Genet , vol.61 , pp. 173-175
    • Powis, Z.1    Farwell, K.D.2    Alamillo, C.L.3
  • 18
    • 84978477192 scopus 로고    scopus 로고
    • Exome sequencing in mostly consanguineous Arab families with neurologic disease provides a high potential molecular diagnosis rate
    • Charng WL, Karaca E, Coban Akdemir Z, et al. Exome sequencing in mostly consanguineous Arab families with neurologic disease provides a high potential molecular diagnosis rate. BMC Med Genomics. 2016;9:42.
    • (2016) BMC Med Genomics , vol.9
    • Charng, W.L.1    Karaca, E.2    Coban Akdemir, Z.3
  • 19
    • 85038243250 scopus 로고    scopus 로고
    • Use of exome sequencing for infants in intensive care units: ascertainment of severe single-gene disorders and effect on medical management
    • Meng L, Pammi M, Saronwala A, et al. Use of exome sequencing for infants in intensive care units: ascertainment of severe single-gene disorders and effect on medical management. JAMA Pediatr. 2017;171:e173438.
    • (2017) JAMA Pediatr , vol.171
    • Meng, L.1    Pammi, M.2    Saronwala, A.3
  • 20
    • 85027699585 scopus 로고    scopus 로고
    • Reducing diagnostic turnaround times of exome sequencing for families requiring timely diagnoses
    • Bourchany A, Thauvin-Robinet C, Lehalle D, et al. Reducing diagnostic turnaround times of exome sequencing for families requiring timely diagnoses. Eur J Med Genet. 2017;60:595–604.
    • (2017) Eur J Med Genet , vol.60 , pp. 595-604
    • Bourchany, A.1    Thauvin-Robinet, C.2    Lehalle, D.3
  • 21
    • 85042135816 scopus 로고    scopus 로고
    • Periodic reanalysis of whole-genome sequencing data enhances the diagnostic advantage over standard clinical genetic testing
    • COI: 1:CAS:528:DC%2BC1cXjvFKqsbg%3D
    • Costain G, Jobling R, Walker S, et al. Periodic reanalysis of whole-genome sequencing data enhances the diagnostic advantage over standard clinical genetic testing. Eur J Hum Genet. 2018;26:740–4.
    • (2018) Eur J Hum Genet , vol.26 , pp. 740-744
    • Costain, G.1    Jobling, R.2    Walker, S.3
  • 22
    • 85028976129 scopus 로고    scopus 로고
    • Diagnostic impact and cost-effectiveness of whole-exome sequencing for ambulant children with suspected monogenic conditions
    • Tan TY, Dillon OJ, Stark Z, et al. Diagnostic impact and cost-effectiveness of whole-exome sequencing for ambulant children with suspected monogenic conditions. JAMA Pediatr. 2017;171:855–62.
    • (2017) JAMA Pediatr , vol.171 , pp. 855-862
    • Tan, T.Y.1    Dillon, O.J.2    Stark, Z.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.