-
1
-
-
0023433593
-
An emerging standard for health communications: The HL7 standard
-
10288565
-
Simborg DW. An emerging standard for health communications: The HL7 standard. Healthc Comput Commun. 1987; 4(10):58-60.
-
(1987)
Healthc Comput Commun
, vol.4
, Issue.10
, pp. 58-60
-
-
Simborg, D.W.1
-
2
-
-
0036394512
-
Standardization of health informatics-results and challenges
-
12425236
-
Klein GO. Standardization of health informatics-results and challenges. Methods Inf Med. 2002; 41(4):261-70.
-
(2002)
Methods Inf Med
, vol.41
, Issue.4
, pp. 261-270
-
-
Klein, G.O.1
-
4
-
-
83055161736
-
Simplifying HL7 Version 3 messages
-
21893839
-
Worden R, Scott P. Simplifying HL7 Version 3 messages. Stud Health Technol Inform. 2011; 169:709-13.
-
(2011)
Stud Health Technol Inform
, vol.169
, pp. 709-713
-
-
Worden, R.1
Scott, P.2
-
5
-
-
79960180109
-
Automatic annotation of medical records
-
16160359 Cited by 0003
-
Antolík J. Automatic annotation of medical records. Stud Health Technol Inform. 2005; 116:817-22. Cited by 0003.
-
(2005)
Stud Health Technol Inform
, vol.116
, pp. 817-822
-
-
Antolík, J.1
-
6
-
-
84890520754
-
Towards comprehensive syntactic and semantic annotations of the clinical narrative
-
23355458 3756257
-
Albright D, Lanfranchi A, Fredriksen A, Styler WF, Warner C, Hwang JD, Choi JD, Dligach D, Nielsen RD, Martin J, Ward W, Palmer M, Savova GK. Towards comprehensive syntactic and semantic annotations of the clinical narrative. J Am Med Inform Assoc. 2013; 20(5):922-30.
-
(2013)
J Am Med Inform Assoc
, vol.20
, Issue.5
, pp. 922-930
-
-
Albright, D.1
Lanfranchi, A.2
Fredriksen, A.3
Styler, W.F.4
Warner, C.5
Hwang, J.D.6
Choi, J.D.7
Dligach, D.8
Nielsen, R.D.9
Martin, J.10
Ward, W.11
Palmer, M.12
Savova, G.K.13
-
7
-
-
67449094152
-
Applying natural language processing toolkits to electronic health records - An experience report
-
19380974
-
Barrett N, Weber-Jahnke JH. Applying natural language processing toolkits to electronic health records - an experience report. Stud Health Technol Inform. 2009; 143:441-6.
-
(2009)
Stud Health Technol Inform
, vol.143
, pp. 441-446
-
-
Barrett, N.1
Weber-Jahnke, J.H.2
-
8
-
-
0036706501
-
Two biomedical sublanguages: A description based on the theories of Zellig Harris
-
12755517
-
Friedman C, Kra P, Rzhetsky A. Two biomedical sublanguages: A description based on the theories of Zellig Harris. J Biomed Inform. 2002; 35(4):222-35.
-
(2002)
J Biomed Inform
, vol.35
, Issue.4
, pp. 222-235
-
-
Friedman, C.1
Kra, P.2
Rzhetsky, A.3
-
9
-
-
84960334067
-
Cohort profile of the South London and Maudsley NHS Foundation Trust Biomedical Research Centre (SLaM BRC) Case Register: Current status and recent enhancement of an Electronic Mental Health Record-derived data resource
-
Perera G, Broadbent M, Callard F, Chang C-K, Downs J, Dutta R, Fernandes A, Hayes RD, Henderson M, Jackson R, Jewell A, Kadra G, Little R, Pritchard M, Shetty H, Tulloch A, Stewart R. Cohort profile of the South London and Maudsley NHS Foundation Trust Biomedical Research Centre (SLaM BRC) Case Register: Current status and recent enhancement of an Electronic Mental Health Record-derived data resource. BMJ Open. 2016; 6(3):008721.
-
(2016)
BMJ Open
, vol.6
, Issue.3
, pp. 008721
-
-
Perera, G.1
Broadbent, M.2
Callard, F.3
Chang, C.-K.4
Downs, J.5
Dutta, R.6
Fernandes, A.7
Hayes, R.D.8
Henderson, M.9
Jackson, R.10
Jewell, A.11
Kadra, G.12
Little, R.13
Pritchard, M.14
Shetty, H.15
Tulloch, A.16
Stewart, R.17
-
10
-
-
84905268983
-
A case study of the Secure Anonymous Information Linkage (SAIL) Gateway: A privacy-protecting remote access system for health-related research and evaluation
-
24440148 4139270
-
Jones KH, Ford DV, Jones C, Dsilva R, Thompson S, Brooks CJ, Heaven ML, Thayer DS, McNerney CL, Lyons RA. A case study of the Secure Anonymous Information Linkage (SAIL) Gateway: A privacy-protecting remote access system for health-related research and evaluation. J Biomed Inform. 2014; 50:196-204.
-
(2014)
J Biomed Inform
, vol.50
, pp. 196-204
-
-
Jones, K.H.1
Ford, D.V.2
Jones, C.3
Dsilva, R.4
Thompson, S.5
Brooks, C.J.6
Heaven, M.L.7
Thayer, D.S.8
McNerney, C.L.9
Lyons, R.A.10
-
11
-
-
84991236665
-
-
https://www.genomicsengland.co.uk/about-gecip/publications/
-
The 100,000 Genomes Project Protocol v3, Genomics England. 2017. https://doi.org/10.6084/m9.figshare.4530893.v2. (from https://www.genomicsengland.co.uk/about-gecip/publications/).
-
(2017)
The 100,000 Genomes Project Protocol v3, Genomics England
-
-
-
12
-
-
84977529499
-
Care episode retrieval: Distributional semantic models for information retrieval in the clinical domain
-
Moen H, Ginter F, Marsi E, Peltonen L-M, Salakoski T, Salanterä S. Care episode retrieval: Distributional semantic models for information retrieval in the clinical domain. BMC Med Inform Dec Making. 2015; 15(S2).
-
(2015)
BMC Med Inform Dec Making.
, vol.15
, Issue.2
-
-
Moen, H.1
Ginter, F.2
Marsi, E.3
Peltonen, L.-M.4
Salakoski, T.5
Salanterä, S.6
-
13
-
-
85016216381
-
NLP-PIER: A Scalable Natural Language Processing, Indexing, and Searching Architecture for Clinical Notes
-
27570663 5001745
-
McEwan R, Melton GB, Knoll BC, Wang Y, Hultman G, Dale JL, Meyer T, Pakhomov SV. NLP-PIER: A Scalable Natural Language Processing, Indexing, and Searching Architecture for Clinical Notes. AMIA Jt Summits Transl Sci Proc. 2016; 2016:150-9.
-
(2016)
AMIA Jt Summits Transl Sci Proc
, vol.2016
, pp. 150-159
-
-
McEwan, R.1
Melton, G.B.2
Knoll, B.C.3
Wang, Y.4
Hultman, G.5
Dale, J.L.6
Meyer, T.7
Pakhomov, S.V.8
-
14
-
-
69949184895
-
The South London and Maudsley NHS Foundation Trust Biomedical Research Centre (SLAM BRC) case register: Development and descriptive data
-
19674459 2736946
-
Stewart R, Soremekun M, Perera G, Broadbent M, Callard F, Denis M, Hotopf M, Thornicroft G, Lovestone S. The South London and Maudsley NHS Foundation Trust Biomedical Research Centre (SLAM BRC) case register: Development and descriptive data. BMC Psychiatry. 2009; 9(1):51.
-
(2009)
BMC Psychiatry
, vol.9
, Issue.1
, pp. 51
-
-
Stewart, R.1
Soremekun, M.2
Perera, G.3
Broadbent, M.4
Callard, F.5
Denis, M.6
Hotopf, M.7
Thornicroft, G.8
Lovestone, S.9
-
17
-
-
84880028418
-
Development and evaluation of a de-identification procedure for a case register sourced from mental health electronic records
-
Fernandes AC, Cloete D, Broadbent MT, Hayes RD, Chang C-K, Jackson RG, Roberts A, Tsang J, Soncul M, Liebscher J, Stewart R, Callard F. Development and evaluation of a de-identification procedure for a case register sourced from mental health electronic records. BMC Med Inf Decis Making. 2013; 13(1):71.
-
(2013)
BMC Med Inf Decis Making
, vol.13
, Issue.1
, pp. 71
-
-
Fernandes, A.C.1
Cloete, D.2
Broadbent, M.T.3
Hayes, R.D.4
Chang, C.-K.5
Jackson, R.G.6
Roberts, A.7
Tsang, J.8
Soncul, M.9
Liebscher, J.10
Stewart, R.11
Callard, F.12
-
18
-
-
80053274431
-
Automated concept-level information extraction to reduce the need for custom software and rules development
-
21697292 3168318
-
D'Avolio LW, Nguyen TM, Goryachev S, Fiore LD. Automated concept-level information extraction to reduce the need for custom software and rules development. J Am Med Inform Assoc. 2011; 18(5):607-13.
-
(2011)
J Am Med Inform Assoc
, vol.18
, Issue.5
, pp. 607-613
-
-
D'Avolio, L.W.1
Nguyen, T.M.2
Goryachev, S.3
Fiore, L.D.4
-
19
-
-
80053019737
-
-
Manning Publications Co. Greenwich, CT, USA
-
Mattmann C, Zitting J. Tika in Action. Greenwich, CT, USA: Manning Publications Co.; 2011.
-
(2011)
Tika in Action
-
-
Mattmann, C.1
Zitting, J.2
-
21
-
-
84911878838
-
Negation's Not Solved: Generalizability Versus Optimizability in Clinical Natural Language Processing
-
Wu S, Miller T, Masanz J, Coarr M, Halgrim S, Carrell D, Clark C. Negation's Not Solved: Generalizability Versus Optimizability in Clinical Natural Language Processing. PLoS ONE. 2014; 9(11):112774.
-
(2014)
PLoS ONE
, vol.9
, Issue.11
, pp. 112774
-
-
Wu, S.1
Miller, T.2
Masanz, J.3
Coarr, M.4
Halgrim, S.5
Carrell, D.6
Clark, C.7
-
22
-
-
85021421466
-
Evaluating natural language processors in the clinical domain
-
Friedman C, Hripcsak G. Evaluating natural language processors in the clinical domain. Development. 1998; 22:24.
-
(1998)
Development
, vol.22
, pp. 24
-
-
Friedman, C.1
Hripcsak, G.2
-
23
-
-
0345863927
-
The unified medical language system (UMLS): Integrating biomedical terminology
-
Bodenreider O. The unified medical language system (UMLS): Integrating biomedical terminology. Nucleic Acids Res. 2004; 32(suppl 1):267-70.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 267-270
-
-
Bodenreider, O.1
-
24
-
-
50649114172
-
Automated de-identification of free-text medical records
-
Neamatullah I, Douglass MM, Lehman L-wH, Reisner A, Villarroel M, Long WJ, Szolovits P, Moody GB, Mark RG, Clifford GD. Automated de-identification of free-text medical records. BMC Med Inform Decis Mak. 2008;8(1).
-
(2008)
BMC Med Inform Decis Mak.
, vol.8
, Issue.1
-
-
Neamatullah, I.1
Douglass, M.M.2
L-Wh, L.3
Reisner, A.4
Villarroel, M.5
Long, W.J.6
Szolovits, P.7
Moody, G.B.8
Mark, R.G.9
Clifford, G.D.10
-
25
-
-
84971287198
-
MIMIC-III, a freely accessible critical care database
-
27219127 4878278
-
Johnson AEW, Pollard TJ, Shen L, Lehman L-wH, Feng M, Ghassemi M, Moody B, Szolovits P, Anthony Celi L, Mark RG. MIMIC-III, a freely accessible critical care database. Sci Data. 2016; 3:160035.
-
(2016)
Sci Data
, vol.3
, pp. 160035
-
-
Johnson, A.E.W.1
Pollard, T.J.2
Shen, L.3
Lehman, L.-W.4
Feng, M.5
Ghassemi, M.6
Moody, B.7
Szolovits, P.8
Anthony Celi, L.9
Mark, R.G.10
-
26
-
-
85049259865
-
-
University of Sheffield
-
University of Sheffield. KConnect UMLS Annotation Task. 2016. http://www.dcs.shef.ac.uk/~genevieve/kconnect/annotation-manual.pdf.
-
(2016)
KConnect UMLS Annotation Task
-
-
-
27
-
-
84891749517
-
The Human Phenotype Ontology project: Linking molecular biology and disease through phenotype data
-
Köhler S, Doelken SC, Mungall CJ, Bauer S, Firth HV, Bailleul-Forestier I, Black GCM, Brown DL, Brudno M, Campbell J, FitzPatrick DR, Eppig JT, Jackson AP, Freson K, Girdea M, Helbig I, Hurst JA, Jähn J, Jackson LG, Kelly AM, Ledbetter DH, Mansour S, Martin CL, Moss C, Mumford A, Ouwehand WH, Park S-M, Riggs ER, Scott RH, Sisodiya S, Vooren SV, Wapner RJ, Wilkie AOM, Wright CF, Vulto-van Silfhout AT, de Leeuw N, de Vries BBA, Washingthon NL, Smith CL, Westerfield M, Schofield P, Ruef BJ, Gkoutos GV, Haendel M, Smedley D, Lewis SE, Robinson PN. The Human Phenotype Ontology project: Linking molecular biology and disease through phenotype data. Nucleic Acids Res. 2014; 42(D1):966-74.
-
(2014)
Nucleic Acids Res
, vol.42
, Issue.D1
, pp. 966-974
-
-
Köhler, S.1
Doelken, S.C.2
Mungall, C.J.3
Bauer, S.4
Firth, H.V.5
Bailleul-Forestier, I.6
Black, G.C.M.7
Brown, D.L.8
Brudno, M.9
Campbell, J.10
Fitzpatrick, D.R.11
Eppig, J.T.12
Jackson, A.P.13
Freson, K.14
Girdea, M.15
Helbig, I.16
Hurst, J.A.17
Jähn, J.18
Jackson, L.G.19
Kelly, A.M.20
Ledbetter, D.H.21
Mansour, S.22
Martin, C.L.23
Moss, C.24
Mumford, A.25
Ouwehand, W.H.26
Park, S.-M.27
Riggs, E.R.28
Scott, R.H.29
Sisodiya, S.30
Vooren, S.V.31
Wapner, R.J.32
Wilkie, A.O.M.33
Wright, C.F.34
Vulto-Van Silfhout, A.T.35
De Leeuw, N.36
De Vries, B.B.A.37
Washingthon, N.L.38
Smith, C.L.39
Westerfield, M.40
Schofield, P.41
Ruef, B.J.42
Gkoutos, G.V.43
Haendel, M.44
Smedley, D.45
Lewis, S.E.46
Robinson, P.N.47
more..
-
28
-
-
0035741485
-
A Simple Algorithm for Identifying Negated Findings and Diseases in Discharge Summaries
-
12123149
-
Chapman WW, Bridewell W, Hanbury P, Cooper GF, Buchanan BG. A Simple Algorithm for Identifying Negated Findings and Diseases in Discharge Summaries. J Biomed Inform. 2001; 34(5):301-10.
-
(2001)
J Biomed Inform
, vol.34
, Issue.5
, pp. 301-310
-
-
Chapman, W.W.1
Bridewell, W.2
Hanbury, P.3
Cooper, G.F.4
Buchanan, B.G.5
-
29
-
-
84985041021
-
Automatic concept recognition using the Human Phenotype Ontology reference and test suite corpora
-
Groza T, Kohler S, Doelken S, Collier N, Oellrich A, Smedley D, Couto FM, Baynam G, Zankl A, Robinson PN. Automatic concept recognition using the Human Phenotype Ontology reference and test suite corpora. Database. 2015; 2015(0):005.
-
(2015)
Database
, vol.2015
, pp. 005
-
-
Groza, T.1
Kohler, S.2
Doelken, S.3
Collier, N.4
Oellrich, A.5
Smedley, D.6
Couto, F.M.7
Baynam, G.8
Zankl, A.9
Robinson, P.N.10
-
30
-
-
84951026409
-
Annotating longitudinal clinical narratives for de-identification: The 2014 i2b2/UTHealth corpus
-
Stubbs A, Uzuner Ö. Annotating longitudinal clinical narratives for de-identification: The 2014 i2b2/UTHealth corpus. J Biomed Inform. 2015; 58:20-29.
-
(2015)
J Biomed Inform
, vol.58
, pp. 20-29
-
-
Stubbs, A.1
Uzuner, Ö.2
-
33
-
-
84871886591
-
Biomedical data privacy: Problems, perspectives, and recent advances
-
23221359 3555341
-
Malin BA, Emam KE, O'Keefe CM. Biomedical data privacy: Problems, perspectives, and recent advances. J Am Med Inform Assoc. 2013; 20(1):2-6.
-
(2013)
J Am Med Inform Assoc
, vol.20
, Issue.1
, pp. 2-6
-
-
Malin, B.A.1
Emam, K.E.2
O'Keefe, C.M.3
-
34
-
-
84903938026
-
Fifty years' development and future perspectives of psychiatric register research
-
24749690
-
Munk-Jørgensen P, Okkels N, Golberg D, Ruggeri M, Thornicroft G. Fifty years' development and future perspectives of psychiatric register research. Acta Psychiatr Scand. 2014; 130(2):87-98.
-
(2014)
Acta Psychiatr Scand
, vol.130
, Issue.2
, pp. 87-98
-
-
Munk-Jørgensen, P.1
Okkels, N.2
Golberg, D.3
Ruggeri, M.4
Thornicroft, G.5
-
35
-
-
80052312723
-
Secondary use of EHR: Data quality issues and informatics opportunities
-
21347133 3041534
-
Botsis T, Hartvigsen G, Chen F, Weng C. Secondary use of EHR: Data quality issues and informatics opportunities. AMIA Summits Transl Sci Proc. 2010; 2010:1-5.
-
(2010)
AMIA Summits Transl Sci Proc
, vol.2010
, pp. 1-5
-
-
Botsis, T.1
Hartvigsen, G.2
Chen, F.3
Weng, C.4
-
36
-
-
18844430561
-
Consequences of impaired data quality on information retrieval in electronic patient records
-
15893261
-
Mikkelsen G, Aasly J. Consequences of impaired data quality on information retrieval in electronic patient records. Int J Med Inform. 2005; 74(5):387-94.
-
(2005)
Int J Med Inform
, vol.74
, Issue.5
, pp. 387-394
-
-
Mikkelsen, G.1
Aasly, J.2
-
37
-
-
84920506978
-
Developing a new model for patient recruitment in mental health services: A cohort study using Electronic Health Records
-
Callard F, Broadbent M, Denis M, Hotopf M, Soncul M, Wykes T, Lovestone S, Stewart R. Developing a new model for patient recruitment in mental health services: A cohort study using Electronic Health Records. BMJ Open. 2014; 4(12):005654.
-
(2014)
BMJ Open
, vol.4
, Issue.12
, pp. 005654
-
-
Callard, F.1
Broadbent, M.2
Denis, M.3
Hotopf, M.4
Soncul, M.5
Wykes, T.6
Lovestone, S.7
Stewart, R.8
-
38
-
-
84882738067
-
Improving performance of natural language processing part-of-speech tagging on clinical narratives through domain adaptation
-
23486109 3756264
-
Ferraro JP, Daume H, DuVall SL, Chapman WW, Harkema H, Haug PJ. Improving performance of natural language processing part-of-speech tagging on clinical narratives through domain adaptation. J Am Med Inform Assoc. 2013; 20(5):931-9.
-
(2013)
J Am Med Inform Assoc
, vol.20
, Issue.5
, pp. 931-939
-
-
Ferraro, J.P.1
Daume, H.2
Duvall, S.L.3
Chapman, W.W.4
Harkema, H.5
Haug, P.J.6
-
39
-
-
84953345206
-
Domain adaptation for semantic role labeling of clinical text
-
26063745 4986662
-
Zhang Y, Tang B, Jiang M, Wang J, Xu H. Domain adaptation for semantic role labeling of clinical text. J Am Med Inform Assoc. 2015; 22(5):967-79.
-
(2015)
J Am Med Inform Assoc
, vol.22
, Issue.5
, pp. 967-979
-
-
Zhang, Y.1
Tang, B.2
Jiang, M.3
Wang, J.4
Xu, H.5
-
40
-
-
84940054677
-
Automated systems for the de-identification of longitudinal clinical narratives: Overview of 2014 i2b2/UTHealth shared task Track 1
-
Stubbs A, Kotfila C, Uzuner Ö. Automated systems for the de-identification of longitudinal clinical narratives: Overview of 2014 i2b2/UTHealth shared task Track 1. J Biomed Inform. 2015; 58:11-9.
-
(2015)
J Biomed Inform
, vol.58
, pp. 11-19
-
-
Stubbs, A.1
Kotfila, C.2
Uzuner, Ö.3
|