Molecular phylogeny of arctoids (Mammalia: Carnivora) with emphasis on phylogenetic and taxonomic positions of the ferret-badgers and skunks

Zoological Science

Volumn 21, Issue 1, 2004, Pages 111-118

  Sato, Jun J ^a,e   Hosoda, Tetsuji ^b   Wolsan, Mieczysław ^c,d   Suzuki, Hitoshi ^a  

^a HOKKAIDO UNIVERSITY   (Japan)

^b Kiokan High School   (Japan)

^c INSTITUTE OF PALEOBIOLOGY   (Poland)

^d MUSEUM AND INSTITUTE OF ZOOLOGY   (Poland)

^e FUKUYAMA UNIVERSITY   (Japan)

Author keywords

Melinae; Melogale; Mephitinae; Nuclear IRBP gene; Nuclear RAG1 gene

Indexed keywords

CARNIVORA; ENHYDRA; GULO; LUTRINAE; MAMMALIA; MARTES; MELES; MELINAE; MELOGALE; MELOGALE MOSCHATA; MELURSUS; MEPHITIDAE; MEPHITIS; MEPHITIS MEPHITIS; MUSTELA; MUSTELA PUTORIUS FURO; MUSTELIDAE; MUSTELINAE; PROCYON; PROCYONIDAE; TAXIDEA TAXUS; TAXIDIINAE; URSIDAE; URSUS;

PRIMER DNA; RETINOL BINDING PROTEIN;

ANIMAL; ARTICLE; BIOLOGICAL MODEL; CARNIVORA; CLASSIFICATION; COMPARATIVE STUDY; DNA BASE COMPOSITION; DNA SEQUENCE; GENE; GENETICS; MOLECULAR GENETICS; NUCLEIC ACID DATABASE; NUCLEOTIDE SEQUENCE; PHYLOGENY;

ANIMALS; BASE COMPOSITION; BASE SEQUENCE; CARNIVORA; DATABASES, NUCLEIC ACID; DNA PRIMERS; GENES, RAG-1; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; PHYLOGENY; RETINOL-BINDING PROTEINS; SEQUENCE ANALYSIS, DNA;

EID: 85047691275     PISSN: 02890003     EISSN: None     Source Type: Journal    
DOI: 10.2108/0289-0003(2004)21[111:MPOAMC]2.0.CO;2     Document Type: Article

References (51)

1. Aristov AA, Baryshnikov GF (2001) The Mammals of Russia and Adjacent Territories. Carnivores and Pinnipeds. Zoological Institute, Russian Academy of Sciences, Saint Petersburg (in Russian)
2. Árnason Ú, Ledje C (1993) The use of highly repetitive DNA for resolving cetacean and pinniped phylogenies. In "Mammal Phylogeny: Placentals" Ed by FS Szalay, MJ Novacek, and MC McKenna, Springer Verlag, New York, pp 74-80
3. Árnason Ú, Widegren B (1986) Pinniped phylogeny enlightened by molecular hybridizations using highly repetitive DNA. Mol Biol Evol 3: 356-365
4. Barriel V, Tassy P (1998) Rooting with multiple outgroups: Consensus versus parsimony. Cladistics 14: 193-200
5. Baryshnikov GF, Abramov AV (1997) Structure of baculum (os penis) in Mustelidae (Mammalia, Carnivora). Communication 1. Zool Zh 76: 1399-1410 (in Russian)
6. Baryshnikov GF, Abramov AV (1998) Structure of baculum (os penis) in Mustelidae (Mammalia, Carnivora). Communication 2. Zool Zh 77: 231-236 (in Russian)
7. Baryshnikov GF, Averianov AO (1990) Milk teeth of predatory mammals (order Carnivora). Part 1. Family Mustelidae. In "Fauna of Mammals and Birds from Late Pleistocene and Holocene of the USSR" Ed by IE Kuzmina and GF Baryshnikov, Trudy Zool Inst AN SSSR 212: 73-119 (in Russian)
8. Baskin JA (1998) Mustelidae. In "Evolution of Tertiary Mammals of North America Vol 1" Ed by CM Janis, KM Scott, and LL Jacobs, Cambridge University Press, Cambridge, pp 152-173
9. Bininda-Emonds ORP, Gittleman JL, Purvis A (1999) Building large trees by combining phylogenetic information: A complete phylogeny of the extant Carnivora (Mammalia). Biol Rev 74: 143-175
10. Bryant HN, Russell AP, Fitch WD (1993) Phylogenetic relationships within the extant Mustelidae (Carnivora): Appraisal of the cladistic status of the Simpsonian subfamilies. Zool J Linn Soc 108: 301-334
11. Corbet GB, Hill JE (1992) The Mammals of the Indomalayan Region: A Systematic Review. Oxford University Press, Oxford
12. Dragoo JW, Honeycutt RL (1997) Systematics of mustelid-like carnivores. J Mammal 78: 426-443
13. Dragoo JW, Honeycutt RL, Schmidly DJ (2003) Taxonomic status of white-backed hog-nosed skunks, genus Conepatus (Carnivora: Mephitidae). J Mammal 84: 159-176
14. Everts W (1968) Beitrag zur Systematik der Sonnendachse. Z Säugetierk 33: 1-19
15. Flynn JJ, Nedbal MA (1998) Phylogeny of the Carnivora (Mammalia): Congruence vs incompatibility among multiple data sets. Mol Phylogenet Evol 9: 414-426
16. Flynn JJ, Nedbal MA, Dragoo JW, Honeycutt RL (2000) Whence the red panda? Mol Phylogenet Evol 17: 190-199
17. Fong S-L, Fong WB, Morris TA, Kedzie KM, Bridges CDB (1990) Characterization and comparative structural features of the gene for human interstitial retinol-binding protein. J Biol Chem 265: 3648-3653
18. Gill T (1872) Arrangement of the families of mammals. With analytical tables. Prepared for the Smithsonian Institution. Smithsonian Mise Coll 11 (1): i-vi + 1-98
19. Ginsburg L (1999) Order Carnivora. In "The Miocene Land Mammals of Europe" Ed by GE Rössner and K Heissig, Verlag Dr. Friedrich Pfeil, Munich, pp 109-148
20. Gray JE (1865) Revision of the genera and species of Mustelidae contained in the British Museum. Proc Zool Soc Lond 1865: 100-154
21. Huelsenbeck JP, Bull JJ, Cunningham CW (1996) Combining data in phylogenetic analysis. Trends Ecol Evol 11: 152-158
22. Ledje C, Árnason Ú (1996a) Phylogenetic analyses of complete cytochrome b genes of the order Carnivora with particular emphasis on the Caniformia. J Mol Evol 42: 135-144
23. Ledje C, Árnason Ú (1996b) Phylogenetic relationships within caniform carnivores based on analyses of the mitochondrial 12S rRNA gene. J Mol Evol 43: 641-649
24. Long CA (1981) Provisional classification and evolution of the badgers. In "Worldwide Furbearer Conference Proceedings, August 3-11, 1980, Frostburg, Maryland USA Vol 1" Ed by JA Chapman and D Pursley, pp 55-85
25. Long CA, Killingley CA (1983) The Badgers of the World. Charles C. Thomas, Springfield
26. McKenna MC, Bell SK (1997) Classification of Mammals above the Species Level. Columbia University Press, New York
27. Nie W, Wang J, O'Brien PCM, Fu B, Ying T, Ferguson-Smith MA, Yang F (2002) The genome phylogeny of domestic cat, red panda and five mustelid species revealed by comparative chromosome painting and G-banding. Chromosome Res 10: 209-222
28. Nowak RM (1999) Walker's Mammals of the World Vol 2. 6th edn, The Johns Hopkins University Press, Baltimore
29. O'Brien SJ, Martenson JS, Eichelberger MA, Thorne ET, Wright F (1989) Genetic variation and molecular systematics of the black-footed ferret. In "Conservation Biology and the Black-Footed Ferret" Ed by US Seal, ET Thorne, MA Bogan, and SH Anderson, Yale University Press, New Haven, pp 21-33
30. Petter G (1971) Origine, phylogénie et systématique des blaireaux. Mammalia 35: 567-597
31. Pocock RI (1922) On the external characters and classification of the Mustelidae. Proc Zool Soc Lond 1921: 803-837
32. Rabeder G (1976) Die Carnivoren (Mammalia) aus dem Altpleistozän von Deutsch-Altenburg 2. Mit Beiträgen zur Systematik einiger Musteliden und Caniden. Beitr Paläontol Österr 1: 5-119
33. Sato JJ, Hosoda T, Wolsan M, Tsuchiya K, Yamamoto Y, Suzuki H (2003) Phylogenetic relationships and divergence times among mustelids (Mammalia: Carnivora) based on nucleotide sequences of the nuclear interphotoreceptor retinoid binding protein and mitochondrial cytochrome b genes. Zool Sci 20: 243-264
34. Schatz DG, Oettinger MA, Baltimore D (1989) The V(D)J recombination activating gene, RAG-1. Cell 59: 1035-1048
35. Schlosser M (1888) Die Affen, Lemuren, Chiropteren, Insectivoren, Marsupialier, Creodonten und Carnivoren des europäischen Tertiärs und deren Beziehungen zu ihren lebenden und fossilen aussereuropäischen Verwandten. II. Theil. Beitr Paläontol Österr-Ung Orients 7 (1889): 1-164
36. Schmidt-Kittler N (1981) Zur Stammesgeschichte der marderverwandten Raubtiergruppen (Musteloidea, Carnivora). Eclogae Geol Helv 74: 753-801
37. Schmidt-Kittler N (1984) On the phylogenetic and biogeographic history of the musteloid carnivores in east and southeast Asia. In "The Evolution of the East Asian Environment, Volume II: Palaeobotany, Palaeozoology and Palaeoanthropology" Ed by RO Whyte, T-N Chiu, C-K Leung, and C-L So, Cent Asian Stud Occ Pap Monogr 59: 710-723
38. Serizawa K, Suzuki H, Tsuchiya K (2000) A phylogenetic view on species radiation in Apodemus inferred from variation of nuclear and mitochondrial genes. Biochem Genet 38: 27-40
39. Simpson GG (1945) The principles of classification and a classification of mammals. Bull Am Mus Nat Hist 85: I-XVI + 1-350
40. Sorenson MD (1999) TreeRot, Version 2. Boston University, Boston
41. Stanhope MJ, Czelusniak J, Si J-S, Nickerson J, Goodman M (1992) A molecular perspective on mammalian evolution from the gene encoding interphotoreceptor retinoid binding protein, with convincing evidence for bat monophyly. Mol Phylogenet Evol 1: 148-160
42. Suzuki H, Tsuchiya K, Takezaki N (2000) A molecular phylogenetic framework for the Ryukyu endemic rodents Tokudaia osimensis and Diplothrix legata. Mol Phylogenet Evol 15: 15-24
43. Swofford DL (1998) PAUP*. Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4. Sinauer Associates, Sunderland
44. Teeling EC, Scally M, Kao DJ, Romagnoli ML, Springer MS, Stanhope MJ (2000) Molecular evidence regarding the origin of echolocation and flight in bats. Nature 403: 188-192
45. Vrana PB, Milinkovitch MC, Powell JR, Wheeler WC (1994) Higher level relationships of the arctoid Carnivora based on sequence data and "total evidence". Mol Phylogenet Evol 3: 47-58
46. Wayne RK, Benveniste RE, Janczewski DN, O'Brien SJ (1989) Molecular and biochemical evolution of the Carnivora. In "Carnivore Behavior, Ecology, and Evolution" Ed by JL Gittleman, Cornell University Press, Ithaca, pp 465-494
47. Wolsan M (1993) Phylogeny and classification of early European Mustelida (Mammalia: Carnivora). Acta Theriol 38: 345-384
48. Wolsan M (1999) Oldest mephitine cranium and its implications for the origin of skunks. Acta Palaeontol Pol 44: 223-230
49. Wozencraft WC (1989) The phylogeny of the Recent Carnivora. In "Carnivore Behavior, Ecology, and Evolution" Ed by JL Gittleman, Cornell University Press, Ithaca, pp 495-535
50. Wozencraft WC (1993) Order Carnivora. In "Mammal Species of the World: A Taxonomic and Geographic Reference 2nd edn" Ed by DE Wilson and DM Reeder, Smithsonian Institution Press, Washington, pp 279-348
51. Wyss AR, Flynn JJ (1993) A phylogenetic analysis and definition of the Carnivora. In "Mammal Phytogeny: Placentals" Ed by FS Szalay, MJ Novacek, and MC McKenna, Springer Verlag, New York, pp 32-52