-
1
-
-
0032195834
-
Unstable malaria in Sudan: The influence of the dry season: Clone multiplicity of Plasmodium falciparum infections in individuals exposed to variable levels of disease transmission
-
Arnot, D. (1998) Unstable malaria in Sudan: the influence of the dry season: clone multiplicity of Plasmodium falciparum infections in individuals exposed to variable levels of disease transmission. Trans. R. Soc. Trop. Med. Hyg., 92, 580-585.
-
(1998)
Trans. R. Soc. Trop. Med. Hyg.
, vol.92
, pp. 580-585
-
-
Arnot, D.1
-
2
-
-
33748198741
-
Within-host competition in genetically diverse malaria infection: Parasite virulence and competitive success
-
Bell, A.S. et al. (2006) Within-host competition in genetically diverse malaria infection: parasite virulence and competitive success. Evolution, 60, 1358-1371.
-
(2006)
Evolution
, vol.60
, pp. 1358-1371
-
-
Bell, A.S.1
-
3
-
-
35348817330
-
Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localised haplotype clustering
-
Browning, S.R. and Browning, B.L. (2007) Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localised haplotype clustering. Am. J. Hum. Genet., 81, 1084-1097.
-
(2007)
Am. J. Hum. Genet.
, vol.81
, pp. 1084-1097
-
-
Browning, S.R.1
Browning, B.L.2
-
4
-
-
85011419001
-
THE REAL McCOIL: A method for the concurrent estimation of the complexity of infection and SNP allele frequency for malaria parasites
-
Chang, H.-H. et al. (2017) THE REAL McCOIL: a method for the concurrent estimation of the complexity of infection and SNP allele frequency for malaria parasites. PLoS Comput. Biol., 13, e1005348.
-
(2017)
PLoS Comput. Biol.
, vol.13
, pp. e1005348
-
-
Chang, H.-H.1
-
5
-
-
84976908696
-
Rapid genotype imputation from sequence without reference panels
-
Davies, R.W. et al. (2016) Rapid genotype imputation from sequence without reference panels. Nat. Genet., 48, 965-969.
-
(2016)
Nat. Genet.
, vol.48
, pp. 965-969
-
-
Davies, R.W.1
-
6
-
-
84856478855
-
A linear complexity phasing method for thousands of genomes
-
Delaneau, O. et al. (2012) A linear complexity phasing method for thousands of genomes. Nat. Methods, 9, 179-181.
-
(2012)
Nat. Methods
, vol.9
, pp. 179-181
-
-
Delaneau, O.1
-
7
-
-
5444251021
-
Competitive release of drug resistance following drug treatment of mixed Plasmodium chabaudi infections
-
de Roode, J. et al. (2004) Competitive release of drug resistance following drug treatment of mixed Plasmodium chabaudi infections. Malar. J., 3, 1-6.
-
(2004)
Malar. J.
, vol.3
, pp. 1-6
-
-
De Roode, J.1
-
8
-
-
21144456523
-
Virulence and competitive ability in genetically diverse malaria infections
-
de Roode, J. et al. (2005) Virulence and competitive ability in genetically diverse malaria infections. Proc. Natl. Acad. Sci. USA, 102, 7624-7628.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 7624-7628
-
-
De Roode, J.1
-
9
-
-
84928712259
-
COIL: A methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data
-
Galinsky, K. et al. (2015) COIL: a methodology for evaluating malarial complexity of infection using likelihood from single nucleotide polymorphism data. Malar. J., 14, 1-9.
-
(2015)
Malar. J.
, vol.14
, pp. 1-9
-
-
Galinsky, K.1
-
10
-
-
84879671007
-
Inferring Demographic History from a Spectrum of Shared Haplotype Lengths
-
Harris, K. and Nielsen, R. (2013) Inferring Demographic History from a Spectrum of Shared Haplotype Lengths. PLoS Genet., 9, e1003521.
-
(2013)
PLoS Genet.
, vol.9
, pp. e1003521
-
-
Harris, K.1
Nielsen, R.2
-
11
-
-
67651222400
-
A flexible and accurate genotype imputation method for the next generation of genome-wide association studies
-
Howie, B.N. et al. (2009) A flexible and accurate genotype imputation method for the next generation of genome-wide association studies. PLoS Genet., 5, e1000529.
-
(2009)
PLoS Genet.
, vol.5
, pp. e1000529
-
-
Howie, B.N.1
-
12
-
-
84857477622
-
Inference of population structure using dense haplotype data
-
Lawson, D.J. et al. (2012) Inference of population structure using dense haplotype data. PLoS Genet., 8, e1002453.
-
(2012)
PLoS Genet.
, vol.8
, pp. e1002453
-
-
Lawson, D.J.1
-
13
-
-
0347361674
-
Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data
-
Li, N. and Stephens, M. (2003) Modeling linkage disequilibrium and identifying recombination hotspots using single-nucleotide polymorphism data. Genetics, 165, 2213-2233.
-
(2003)
Genetics
, vol.165
, pp. 2213-2233
-
-
Li, N.1
Stephens, M.2
-
14
-
-
84985016478
-
Fast haplotype matching in very large cohorts using the Li and Stephens model
-
Lunter, G. (2016) Fast haplotype matching in very large cohorts using the Li and Stephens model. bioRxiv, 10.1101/048280.
-
(2016)
BioRxiv
-
-
Lunter, G.1
-
15
-
-
57649114759
-
A global network for investigating the genomic epidemiology of malaria
-
MalariaGEN (2008) A global network for investigating the genomic epidemiology of malaria. Nature, 456, 732-737.
-
(2008)
Nature
, vol.456
, pp. 732-737
-
-
Malaria, G.E.N.1
-
16
-
-
84863982076
-
Analysis of plasmodium falciparum diversity in natural infections by deep sequencing
-
Manske, M. et al. (2012) Analysis of plasmodium falciparum diversity in natural infections by deep sequencing. Nature, 487, 375-379.
-
(2012)
Nature
, vol.487
, pp. 375-379
-
-
Manske, M.1
-
17
-
-
84926320923
-
Demography and the age of rare variants
-
Mathieson, I. and McVean, G. (2014) Demography and the age of rare variants. PLoS Genet., 10, e1004528.
-
(2014)
PLoS Genet.
, vol.10
, pp. e1004528
-
-
Mathieson, I.1
McVean, G.2
-
18
-
-
77956295988
-
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
-
McKenna, A. et al. (2010) The Genome Analysis Toolkit: a MapReduce framework for analyzing next-generation DNA sequencing data. Genome Res., 20, 1297-1303.
-
(2010)
Genome Res.
, vol.20
, pp. 1297-1303
-
-
McKenna, A.1
-
19
-
-
84984985832
-
Indels, structural variation, and recombination drive genomic diversity in Plasmodium falciparum
-
Miles, A. et al. (2016) Indels, structural variation, and recombination drive genomic diversity in Plasmodium falciparum. Genome Res., 26, 1288-1299.
-
(2016)
Genome Res.
, vol.26
, pp. 1288-1299
-
-
Miles, A.1
-
20
-
-
84971401229
-
Genomic analysis of local variation and recent evolution in Plasmodium vivax
-
Pearson, R.D. et al. (2016) Genomic analysis of local variation and recent evolution in Plasmodium vivax. Nat. Genet., 48, 959-964.
-
(2016)
Nat. Genet.
, vol.48
, pp. 959-964
-
-
Pearson, R.D.1
-
21
-
-
84901370399
-
A General Approach for Haplotype Phasing across the Full Spectrum of Relatedness
-
O'connell, J. et al. (2014) A General Approach for Haplotype Phasing across the Full Spectrum of Relatedness. PLoS Genet., 10, e1004234.
-
(2014)
PLoS Genet.
, vol.10
, pp. e1004234
-
-
O'Connell, J.1
-
22
-
-
84978791332
-
Inferring Strain Mixture within Clinical Plasmodium falciparum Isolates from Genomic Sequence Data
-
O'brien, D.J. et al. (2016) Inferring Strain Mixture within Clinical Plasmodium falciparum Isolates from Genomic Sequence Data. PLoS Comput. Biol., 12, e1004824.
-
(2016)
PLoS Comput. Biol.
, vol.12
, pp. e1004824
-
-
O'Brien, D.J.1
-
23
-
-
0037167852
-
Detecting recent positive selection in the human genome from haplotype structure
-
Sabeti, P.C. et al. (2002) Detecting recent positive selection in the human genome from haplotype structure. Nature, 419, 832-837.
-
(2002)
Nature
, vol.419
, pp. 832-837
-
-
Sabeti, P.C.1
-
25
-
-
84979225091
-
-
WHO World Health Organization, Geneva, Switzerland
-
WHO. (2016) World Malaria Report 2015. World Health Organization, Geneva, Switzerland.
-
(2016)
World Malaria Report 2015
-
-
|