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Volumn 2017, Issue 12, 2017, Pages

Transcriptomic analysis identifies genes and pathways related to myrmecophagy in the Malayan pangolin (Manis javanica)

Author keywords

Conservation; Digestion; Myrmecophagy; Pangolin

Indexed keywords

CHITINASE; POLYKETIDE; TERPENOID; TRANSCRIPTOME;

EID: 85038908674     PISSN: None     EISSN: 21678359     Source Type: Journal    
DOI: 10.7717/peerj.4140     Document Type: Article
Times cited : (18)

References (35)
  • 1
    • 85019850753 scopus 로고    scopus 로고
    • Stomach con-tents of the Indian Pangolin Manis crassicaudata (Mammalia: Pholidota: Manidae) in tropical forests of southern India
    • Ashokkumar M, Valsarajan D, Suresh MA, Kaimal AR, Chandy G. 2017. Stomach con-tents of the Indian Pangolin Manis crassicaudata (Mammalia: Pholidota: Manidae) in tropical forests of southern India. Journal of Threatened Taxa 9(5):10246-10248
    • (2017) Journal of Threatened Taxa , vol.9 , Issue.5 , pp. 10246-10248
    • Ashokkumar, M.1    Valsarajan, D.2    Suresh, M.A.3    Kaimal, A.R.4    Chandy, G.5
  • 5
    • 84907510676 scopus 로고    scopus 로고
    • The complete mitochondrial genome of Temminck's ground pangolin (Smutsia tem-minckii; Smuts, 1832) and phylogenetic position of the Pholidota (Weber, 1904)
    • Du Toit Z, Grobler JP, Kotzé A, Jansen R, Brettschneider H, Dalton DL. 2014. The complete mitochondrial genome of Temminck's ground pangolin (Smutsia tem-minckii; Smuts, 1832) and phylogenetic position of the Pholidota (Weber, 1904). Gene 551(1):49-54 DOI 10.1016/j.gene.2014.08.040
    • (2014) Gene , vol.551 , Issue.1 , pp. 49-54
    • Du Toit, Z.1    Grobler, J.P.2    Kotzé, A.3    Jansen, R.4    Brettschneider, H.5    Dalton, D.L.6
  • 6
    • 74249112137 scopus 로고    scopus 로고
    • Potential role of chitinase 3-like-1 in inflammation-associated carcinogenic changes of epithelial cells
    • Eurich K, Segawa M, Toei-Shimizu S, Mizoguchi E. 2009. Potential role of chitinase 3-like-1 in inflammation-associated carcinogenic changes of epithelial cells. World Journal of Gastroenterology 15:5249-5259
    • (2009) World Journal of Gastroenterology , vol.15 , pp. 5249-5259
    • Eurich, K.1    Segawa, M.2    Toei-Shimizu, S.3    Mizoguchi, E.4
  • 7
    • 84968902653 scopus 로고    scopus 로고
    • The regulation of essential amino acid synthesis and accumulation in plants
    • Galili G, Amir R, Fernie AR. 2016. The regulation of essential amino acid synthesis and accumulation in plants. Annual Review of Plant Biology 67:153-178 DOI 10.1146/annurev-arplant-043015-112213
    • (2016) Annual Review of Plant Biology , vol.67 , pp. 153-178
    • Galili, G.1    Amir, R.2    Fernie, A.R.3
  • 8
    • 70350378553 scopus 로고    scopus 로고
    • The phylogeny of living and extinct pangolins (Mammalia, Pholidota) and associated taxa: a morphology based analysis
    • Gaudin TJ, Emry RJ, Wible JR. 2009. The phylogeny of living and extinct pangolins (Mammalia, Pholidota) and associated taxa: a morphology based analysis. Journal of Mammalian Evolution 16:235-305 DOI 10.1007/s10914-009-9119-9
    • (2009) Journal of Mammalian Evolution , vol.16 , pp. 235-305
    • Gaudin, T.J.1    Emry, R.J.2    Wible, J.R.3
  • 9
    • 0034851008 scopus 로고    scopus 로고
    • Nucleotide sugar transporters: biological and functional aspects
    • Gerardy-Schahn R, Oelmann S, Bakker H. 2001. Nucleotide sugar transporters: biological and functional aspects. Biochimie 83:775-782 DOI 10.1016/S0300-9084(01)01322-0
    • (2001) Biochimie , vol.83 , pp. 775-782
    • Gerardy-Schahn, R.1    Oelmann, S.2    Bakker, H.3
  • 11
    • 84930882646 scopus 로고    scopus 로고
    • Captive breeding of pangolins: current status, problems and future prospects
    • Hua L, Gong S, Wang F, Li W, Ge Y, Li X, Hou F. 2015. Captive breeding of pangolins: current status, problems and future prospects. ZooKeys 507:99-114 DOI 10.3897/zookeys.507.6970
    • (2015) ZooKeys , vol.507 , pp. 99-114
    • Hua, L.1    Gong, S.2    Wang, F.3    Li, W.4    Ge, Y.5    Li, X.6    Hou, F.7
  • 12
    • 84956505171 scopus 로고    scopus 로고
    • Stomach chitinase from Japanese Sardine Sardinops melanostictus: purification, characterization, and molecular cloning of chitinase isozymes with a long linker
    • Kawashima S, Ikehata H, Tada C, Ogino T, Kakizaki H, Ikeda M, Fukushima H, Matsumiya M. 2016. Stomach chitinase from Japanese Sardine Sardinops melanostictus: purification, characterization, and molecular cloning of chitinase isozymes with a long linker. Marine Drugs 14:Article 22 DOI 10.3390/md14010022
    • (2016) Marine Drugs , vol.14
    • Kawashima, S.1    Ikehata, H.2    Tada, C.3    Ogino, T.4    Kakizaki, H.5    Ikeda, M.6    Fukushima, H.7    Matsumiya, M.8
  • 13
    • 76849115194 scopus 로고    scopus 로고
    • Evolutionary and biochemical differences between human and monkey acidic mammalian chitinases
    • Krykbaev R, Fitz LJ, Reddy PS, Winkler A, Xuan D, Yang XK, Fleming M, Wolf SF. 2010. Evolutionary and biochemical differences between human and monkey acidic mammalian chitinases. Gene 452:63-71 DOI 10.1016/j.gene.2009.12.005
    • (2010) Gene , vol.452 , pp. 63-71
    • Krykbaev, R.1    Fitz, L.J.2    Reddy, P.S.3    Winkler, A.4    Xuan, D.5    Yang, X.K.6    Fleming, M.7    Wolf, S.F.8
  • 14
    • 79961123152 scopus 로고    scopus 로고
    • RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome
    • Li B, Dewey CN. 2011. RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome. BMC Bioinformatics 12:323 DOI 10.1186/1471-2105-12-323
    • (2011) BMC Bioinformatics , vol.12 , pp. 323
    • Li, B.1    Dewey, C.N.2
  • 17
    • 84891467628 scopus 로고    scopus 로고
    • Plant species association, burrow characteristics and the diet of the Indian Pangolin, Manis crassicaudata, in the Potohar Plateau, Pakistan
    • Mahmood T, Jabeen K, Hussain I, Kayani AR. 2013. Plant species association, burrow characteristics and the diet of the Indian Pangolin, Manis crassicaudata, in the Potohar Plateau, Pakistan. Pakistan Journal of Zoology 45:1533-1539
    • (2013) Pakistan Journal of Zoology , vol.45 , pp. 1533-1539
    • Mahmood, T.1    Jabeen, K.2    Hussain, I.3    Kayani, A.R.4
  • 18
    • 84884615898 scopus 로고    scopus 로고
    • Immunohistochemical demonstration of keratins in the epidermal layers of the Malayan pangolin (Manis javanica), with remarks on the evolution of the integumental scale armour
    • Meyer W, Liumsiricharoen M, Suprasert A, Fleischer LG, Hewicker-Trautwein M. 2013. Immunohistochemical demonstration of keratins in the epidermal layers of the Malayan pangolin (Manis javanica), with remarks on the evolution of the integumental scale armour. European Journal of Histochemistry 57:172-177 DOI 10.4081/ejh.2013.e27
    • (2013) European Journal of Histochemistry , vol.57 , pp. 172-177
    • Meyer, W.1    Liumsiricharoen, M.2    Suprasert, A.3    Fleischer, L.G.4    Hewicker-Trautwein, M.5
  • 19
    • 85015238080 scopus 로고    scopus 로고
    • Forensic application of DNA barcoding for identification of illegally traded African pangolin scales
    • Mwale M, Dalton DL, Jansen R, De Bruyn M, Pietersen D, Mokgokong PS, Kotze A. 2017. Forensic application of DNA barcoding for identification of illegally traded African pangolin scales. Genome 60:272-284 DOI 10.1139/gen-2016-0144
    • (2017) Genome , vol.60 , pp. 272-284
    • Mwale, M.1    Dalton, D.L.2    Jansen, R.3    De Bruyn, M.4    Pietersen, D.5    Mokgokong, P.S.6    Kotze, A.7
  • 21
    • 84959518927 scopus 로고    scopus 로고
    • Diet and prey selectivity of the specialist myrmecophage, Temminck's ground pangolin
    • Pietersen DW, Symes CT, Woodborne S, McKechnie AE, Jansen R. 2016. Diet and prey selectivity of the specialist myrmecophage, Temminck's ground pangolin. Journal of Zoology 298:198-208 DOI 10.1111/jzo.12302
    • (2016) Journal of Zoology , vol.298 , pp. 198-208
    • Pietersen, D.W.1    Symes, C.T.2    Woodborne, S.3    McKechnie, A.E.4    Jansen, R.5
  • 22
    • 0031444501 scopus 로고    scopus 로고
    • Foraging behaviour and ecology of the Cape pangolin (Manis temminckii) in north-western Zimbabwe
    • Richer R, Coulson IAN, Heath M. 1997. Foraging behaviour and ecology of the Cape pangolin (Manis temminckii) in north-western Zimbabwe. African Journal of Ecology 35(4):361-369 DOI 10.1111/j.1365-2028.1997.101-89101.x
    • (1997) African Journal of Ecology , vol.35 , Issue.4 , pp. 361-369
    • Richer, R.1    Coulson, I.A.N.2    Heath, M.3
  • 23
    • 75249087100 scopus 로고    scopus 로고
    • edgeR: a Bioconductor package for differential expression analysis of digital gene expression data
    • Robinson MD, McCarthy DJ, Smyth GK. 2010. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics 26:139-140 DOI 10.1093/bioinformatics/btp616
    • (2010) Bioinformatics , vol.26 , pp. 139-140
    • Robinson, M.D.1    McCarthy, D.J.2    Smyth, G.K.3
  • 25
    • 84883340964 scopus 로고    scopus 로고
    • Insectivorous bats digest chitin in the stomach using acidic mammalian chitinase
    • Strobel S, Roswag A, Becker NI, Trenczek TE, Encarnacao JA. 2013. Insectivorous bats digest chitin in the stomach using acidic mammalian chitinase. PLOS ONE 8:e72770 DOI 10.1371/journal.pone.0072770
    • (2013) PLOS ONE , vol.8
    • Strobel, S.1    Roswag, A.2    Becker, N.I.3    Trenczek, T.E.4    Encarnacao, J.A.5
  • 26
    • 0032913552 scopus 로고    scopus 로고
    • Ecological factors affecting the feeding behaviour of pangolins (Manis temminckii)
    • Swart JM, Richardson PRK, Ferguson JWH. 1999. Ecological factors affecting the feeding behaviour of pangolins (Manis temminckii). Journal of Zoology 247:281-292 DOI 10.1111/j.1469-7998.1999.tb00992.x
    • (1999) Journal of Zoology , vol.247 , pp. 281-292
    • Swart, J.M.1    Richardson, P.R.K.2    Ferguson, J.W.H.3
  • 28
    • 85017106529 scopus 로고    scopus 로고
    • Pangolin dis-tribution and conservation status in Bangladesh
    • Trageser S, Ghose A, Faisal M, Mro P, Mro P, Rahman SC. 2017. Pangolin dis-tribution and conservation status in Bangladesh. PLOS ONE 12:e0175450 DOI 10.1371/journal.pone.0175450
    • (2017) PLOS ONE , vol.12
    • Trageser, S.1    Ghose, A.2    Faisal, M.3    Mro, P.4    Mro, P.5    Rahman, S.C.6
  • 30
    • 75249095274 scopus 로고    scopus 로고
    • DEGseq: an R package for identi-fying differentially expressed genes from RNA-seq data
    • Wang L, Feng Z, Wang X, Wang X, Zhang X. 2010. DEGseq: an R package for identi-fying differentially expressed genes from RNA-seq data. Bioinformatics 26:136-138 DOI 10.1093/bioinformatics/btp612
    • (2010) Bioinformatics , vol.26 , pp. 136-138
    • Wang, L.1    Feng, Z.2    Wang, X.3    Wang, X.4    Zhang, X.5
  • 34
    • 85009431334 scopus 로고    scopus 로고
    • High concentration of branched-chain amino acids promotes oxidative stress, inflammation and migration of human peripheral blood mononuclear cells via mTORC1 activation
    • Zhenyukh O, Civantos E, Ruiz-Ortega M, Sanchez MS, Vazquez C, Peiro C, Egido J, Mas S. 2017. High concentration of branched-chain amino acids promotes oxidative stress, inflammation and migration of human peripheral blood mononuclear cells via mTORC1 activation. Free Radical Biology and Medicine 104:165-177 DOI 10.1016/j.freeradbiomed.2017.01.009
    • (2017) Free Radical Biology and Medicine , vol.104 , pp. 165-177
    • Zhenyukh, O.1    Civantos, E.2    Ruiz-Ortega, M.3    Sanchez, M.S.4    Vazquez, C.5    Peiro, C.6    Egido, J.7    Mas, S.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.