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Volumn 58, Issue , 2017, Pages S397-S405

A genomic view of the pleistocene population history of asia

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EID: 85037614870     PISSN: 00113204     EISSN: None     Source Type: Journal    
DOI: 10.1086/694422     Document Type: Article
Times cited : (14)

References (55)
  • 2
    • 84920152581 scopus 로고    scopus 로고
    • Modern human teeth from Late Pleistocene Luna Cave (Guangxi, China). Multidisciplinary perspectives on the Gigantopithecus fauna and quaternary biostratigraphy in East Asia. Special issue
    • Bae, Christopher J., Wei Wang, Jianxin Zhao, Shengming Huang, Feng Tian, and Guanjun Shen. 2014. Modern human teeth from Late Pleistocene Luna Cave (Guangxi, China). Multidisciplinary perspectives on the Gigantopithecus fauna and quaternary biostratigraphy in East Asia. Special issue, Quaternary International 354(December):169–183. doi:10.1016/j.quaint.2014.06.051.
    • (2014) Quaternary International , vol.354 , Issue.December , pp. 169-183
    • Bae, C.J.1    Jianxin Zhao, W.W.2    Feng Tian, S.H.3    Shen, G.4
  • 5
    • 84939496491 scopus 로고    scopus 로고
    • An early modern human from Romania with a recent Neanderthal ancestor
    • Fu, Qiaomei, Mateja Hajdinjak, Oana Teodora Moldovan, Silviu Constantin, Swapan Mallick, Pontus Skoglund, Nick Patterson, et al. 2015. An early modern human from Romania with a recent Neanderthal ancestor. Nature 524(7564):216–219. doi:10.1038/nature14558.
    • (2015) Nature , vol.524 , Issue.7564 , pp. 216-219
    • Fu, Q.1    Hajdinjak, M.2    Moldovan, O.T.3    Constantin, S.4    Mallick, S.5    Skoglund, P.6    Patterson, N.7
  • 6
    • 84914688940 scopus 로고    scopus 로고
    • Genome sequence of a 45,000-year-old modern human from western Siberia
    • Fu, Qiaomei, Heng Li, Priya Moorjani, Flora Jay, Sergey M. Slepchenko, Aleksei A. Bondarev, Philip L. F. Johnson, et al. 2014. Genome sequence of a 45,000-year-old modern human from western Siberia. Nature 514(7523):445–449. doi:10.1038/nature13810.
    • (2014) Nature , vol.514 , Issue.7523 , pp. 445-449
    • Fu, Q.1    Li, H.2    Moorjani, P.3    Jay, F.4    Slepchenko, S.M.5    Bondarev, A.A.6    Johnson, P.L.F.7
  • 11
    • 80053386624 scopus 로고    scopus 로고
    • Bayesian inference of ancient human demography from individual genome sequences
    • Gronau, Ilan, Melissa J. Hubisz, Brad Gulko, Charles G. Danko, and Adam Siepel. 2011. Bayesian inference of ancient human demography from individual genome sequences. Nature Genetics 43(10):1031–1034. doi:10.1038/ng.937.
    • (2011) Nature Genetics , vol.43 , Issue.10 , pp. 1031-1034
    • Gronau, I.1    Hubisz, M.J.2    Gulko, B.3    Danko, C.G.4    Siepel, A.5
  • 13
    • 73449149044 scopus 로고    scopus 로고
    • Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data
    • Gutenkunst, Ryan N., Ryan D. Hernandez, Scott H. Williamson, and Carlos D. Bustamante. 2009. Inferring the joint demographic history of multiple populations from multidimensional SNP frequency data. PLoS Genetics 5(10): e1000695. doi:10.1371/journal.pgen.1000695.
    • (2009) Plos Genetics , vol.5 , Issue.10
    • Gutenkunst, R.N.1    Hernandez, R.D.2    Williamson, S.H.3    Bustamante, C.D.4
  • 14
    • 84930953216 scopus 로고    scopus 로고
    • Massive migration from the steppe was a source for Indo-European languages in Europe
    • Haak, Wolfgang, Iosif Lazaridis, Nick Patterson, Nadin Rohland, Swapan Mallick, Bastien Llamas, Guido Brandt, et al. 2015. Massive migration from the steppe was a source for Indo-European languages in Europe. Nature 522(7555):207– 211. doi:10.1038/nature14317.
    • (2015) Nature , vol.522 , Issue.7555 , pp. 207-211
    • Haak, W.1    Lazaridis, I.2    Patterson, N.3    Rohland, N.4    Mallick, S.5    Llamas, B.6    Brandt, G.7
  • 15
    • 84879671007 scopus 로고    scopus 로고
    • Inferring demographic history from a spectrum of shared haplotype lengths
    • Harris, Kelley, and Rasmus Nielsen. 2013. Inferring demographic history from a spectrum of shared haplotype lengths. PLoS Genetics 9(6):e1003521. doi:10.1371/journal.pgen.1003521.
    • (2013) Plos Genetics , vol.9 , Issue.6
    • Harris, K.1    Nielsen, R.2
  • 16
    • 84906242803 scopus 로고    scopus 로고
    • Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA
    • Huerta-Sánchez, Emilia, Xin Jin, Asan, Zhuoma Bianba, Benjamin M. Peter, Nicolas Vinckenbosch, Yu Liang, et al. 2014. Altitude adaptation in Tibetans caused by introgression of Denisovan-like DNA. Nature 512(7513):194–197 (advance online publication, July). doi:10.1038/nature13408.
    • (2014) Nature , vol.512 , Issue.7513 , pp. 194-197
    • Huerta-Sánchez, E.1    Jin, X.2    Asan, Z.B.3    Peter, B.M.4    Vinckenbosch, N.5    Liang, Y.6
  • 17
    • 84959440444 scopus 로고    scopus 로고
    • Ancient gene flow from early modern humans into Eastern Neanderthals
    • Kuhlwilm, Martin, Ilan Gronau, Melissa J. Hubisz, Cesare de Filippo, Javier Prado-Martinez, Martin Kircher, Qiaomei Fu, et al. 2016. Ancient gene flow from early modern humans into Eastern Neanderthals. Nature 530(7591):429– 433 (advance online publication, February. doi:10.1038/nature16544.
    • (2016) Nature , vol.530 , Issue.7591 , pp. 429-433
    • Kuhlwilm, M.1    Gronau, I.2    Hubisz, M.J.3    Filippo, C.4    Prado-Martinez, J.5    Kircher, M.6    Qiaomei, F.7
  • 18
    • 84984999386 scopus 로고    scopus 로고
    • Genomic insights into the origin of farming in the Ancient Near East
    • Lazaridis, Iosif, Dani Nadel, Gary Rollefson, Deborah C. Merrett, Nadin Rohland, Swapan Mallick, Daniel Fernandes, et al. 2016. Genomic insights into the origin of farming in the Ancient Near East. Nature 536(7617):419–424. doi:10.1038/nature19310.
    • (2016) Nature , vol.536 , Issue.7617 , pp. 419-424
    • Iosif, L.1    Gary Rollefson, D.N.2    Merrett, D.C.3    Rohland, N.4    Daniel Fernandes, S.M.5
  • 19
    • 84907803675 scopus 로고    scopus 로고
    • Ancient human genomes suggest three ancestral populations for present-day Europeans
    • Lazaridis, Iosif, Nick Patterson, Alissa Mittnik, Gabriel Renaud, Swapan Mallick, Karola Kirsanow, Peter H. Sudmant, et al. 2014. Ancient human genomes suggest three ancestral populations for present-day Europeans. Nature 513 (7518):409–413. doi:10.1038/nature13673.
    • (2014) Nature , vol.513 , Issue.7518 , pp. 409-413
    • Lazaridis, I.1    Patterson, N.2    Mittnik, A.3    Renaud, G.4    Mallick, S.5    Kirsanow, K.6    Sudmant, P.H.7
  • 20
    • 84949256743 scopus 로고    scopus 로고
    • Calibrating the human mutation rate via ancestral recombination density in diploid genomes
    • Lipson, Mark, Po-Ru Loh, Sriram Sankararaman, Nick Patterson, Bonnie Berger, and David Reich. 2015. Calibrating the human mutation rate via ancestral recombination density in diploid genomes. PLoS Genetics 11(11):e1005550. doi: 10.1371/journal.pgen.1005550.
    • (2015) Plos Genetics , vol.11 , Issue.11
    • Lipson, M.1    Loh, P.-R.2    Sankararaman, S.3    Patterson, N.4    Berger, B.5    Reich, D.6
  • 21
    • 84945953770 scopus 로고    scopus 로고
    • The earliest unequivocally modern humans in southern China
    • Liu, Wu, María Martinón-Torres, Yan-jun Cai, Song Xing, Hao-wen Tong, Shuwen Pei, Mark Jan Sier, et al. 2015. The earliest unequivocally modern humans in southern China. Nature 526(7575):696–699. doi:10.1038/nature15696.
    • (2015) Nature , vol.526 , Issue.7575 , pp. 696-699
    • Liu, W.1    Martinón-Torres, M.2    Cai, Y.-J.3    Xing, S.4    Tong, H.-W.5    Pei, S.6    Sier, M.J.7
  • 22
    • 71549131287 scopus 로고    scopus 로고
    • Huanglong Cave: A Late Pleistocene human fossil site in Hubei Province, China. Hominin morphological and behavioral variation in Eastern Asia and Australasia: Current perspectives
    • Liu, Wu, Xianzhu Wu, Shuwen Pei, Xiujie Wu, and Christopher J. Norton. 2010. Huanglong Cave: a Late Pleistocene human fossil site in Hubei Province, China. Hominin morphological and behavioral variation in Eastern Asia and Australasia: current perspectives. Special issue, Quaternary International, 211(1– 2):29–41. doi:10.1016/j.quaint.2009.06.017.
    • (2010) Special Issue, Quaternary International , vol.211 , Issue.1-2 , pp. 29-41
    • Liu, W.1    Xianzhu, W.2    Pei, S.3    Xiujie, W.4    Norton, C.J.5
  • 24
    • 84991728057 scopus 로고    scopus 로고
    • The Simons Genome Di- versity Project: 300 genomes from 142 diverse populations
    • Mallick, Swapan, Heng Li, Mark Lipson, Iain Mathieson, Melissa Gymrek, Fernando Racimo, Mengyao Zhao, et al. 2016. The Simons Genome Di- versity Project: 300 genomes from 142 diverse populations. Nature 538 (7624):201–206. doi:10.1038/nature18964.
    • (2016) Nature , vol.538 , Issue.7624 , pp. 201-206
    • Mallick, S.1    Li, H.2    Lipson, M.3    Mathieson, I.4    Gymrek, M.5    Racimo, F.6    Zhao, M.7
  • 25
    • 84867331947 scopus 로고    scopus 로고
    • A high-coverage genome sequence from an archaic Denisovan individual
    • Meyer, Matthias, Martin Kircher, Marie-Theres Gansauge, Heng Li, Fernando Racimo, Swapan Mallick, Joshua G. Schraiber, et al. 2012. A high-coverage genome sequence from an archaic Denisovan individual. Science 338 (6104):222–226. doi:10.1126/science.1224344.
    • (2012) Science , vol.338 , Issue.6104 , pp. 222-226
    • Meyer, M.1    Kircher, M.2    Gansauge, M.-T.3    Li, H.4    Racimo, F.5    Mallick, S.6    Schraiber, J.G.7
  • 27
    • 84975795680 scopus 로고    scopus 로고
    • An integrated map of genetic variation from 1,092 human genomes
    • Genomes Project Consortium. 2012. An integrated map of genetic variation from 1,092 human genomes. Nature 491(7422):56–65. doi:10.1038/nature11632.
    • (2012) Nature , vol.491 , Issue.7422 , pp. 56-65
  • 28
    • 84943171338 scopus 로고    scopus 로고
    • A global reference for human genetic variation
    • Genomes Project Consortium. 2015. A global reference for human genetic variation. Nature 526 (7571):68–74. doi:10.1038/nature15393.
    • (2015) Nature , vol.526 , Issue.7571 , pp. 68-74
  • 29
    • 84931566802 scopus 로고    scopus 로고
    • Reconstructing ancient genomes and epigenomes
    • Orlando, Ludovic, M. Thomas P. Gilbert, and Eske Willerslev. 2015. Reconstructing ancient genomes and epigenomes. Nature Reviews Genetics 16(7):395–408. doi:10.1038/nrg3935.
    • (2015) Nature Reviews Genetics , vol.16 , Issue.7 , pp. 395-408
    • Orlando, L.1    Gilbert, M.T.P.2    Willerslev, E.3
  • 30
    • 84981502573 scopus 로고    scopus 로고
    • Genomic analyses inform on migration events during the peopling of Eurasia
    • Pagani, Luca, Daniel John Lawson, Evelyn Jagoda, Alexander Mörseburg, Anders Eriksson, Mario Mitt, Florian Clemente, et al. 2016. Genomic analyses inform on migration events during the peopling of Eurasia. Nature 538 (7624):238–242. doi:10.1038/nature19792.
    • (2016) Nature , vol.538 , Issue.7624 , pp. 238-242
    • Pagani, L.1    Lawson, D.J.2    Jagoda, E.3    Mörseburg, A.4    Eriksson, A.5    Mitt, M.6    Clemente, F.7
  • 31
    • 84906818554 scopus 로고    scopus 로고
    • Toward a new history and geography of human genes informed by ancient DNA
    • Pickrell, Joseph K., and David Reich. 2014. Toward a new history and geography of human genes informed by ancient DNA. Trends in Genetics 30(9):377–389. doi:10.1016/j.tig.2014.07.007.
    • (2014) Trends in Genetics , vol.30 , Issue.9 , pp. 377-389
    • Pickrell, J.K.1    Reich, D.2
  • 32
    • 77649263292 scopus 로고    scopus 로고
    • Population genetic inference from genomic sequence variation
    • Pool, John E., Ines Hellmann, Jeffrey D. Jensen, and Rasmus Nielsen. 2010. Population genetic inference from genomic sequence variation. Genome Research 20(3):291–300. doi:10.1101/gr.079509.108.
    • (2010) Genome Research , vol.20 , Issue.3 , pp. 291-300
    • Pool, J.E.1    Hellmann, I.2    Jensen, J.D.3    Nielsen, R.4
  • 33
    • 84892365780 scopus 로고    scopus 로고
    • The complete genome sequence of a Neanderthal from the Altai Mountains
    • Prüfer, Kay, Fernando Racimo, Nick Patterson, Flora Jay, Sriram Sankararaman, Susanna Sawyer, Anja Heinze, et al. 2014. The complete genome sequence of a Neanderthal from the Altai Mountains. Nature 505(7481):43–49. doi:10.1038/nature12886.
    • (2014) Nature , vol.505 , Issue.7481 , pp. 43-49
    • Prüfer, K.1    Racimo, F.2    Patterson, N.3    Jay, F.4    Sankararaman, S.5    Sawyer, S.6    Heinze, A.7
  • 34
    • 84892367625 scopus 로고    scopus 로고
    • Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans
    • Raghavan, Maanasa, Pontus Skoglund, Kelly E. Graf, Mait Metspalu, Anders Albrechtsen, Ida Moltke, Simon Rasmussen, et al. 2014. Upper Palaeolithic Siberian genome reveals dual ancestry of Native Americans. Nature 505 (7481):87–91. doi:10.1038/nature12736.
    • (2014) Nature , vol.505 , Issue.7481 , pp. 87-91
    • Raghavan, M.1    Skoglund, P.2    Graf, K.E.3    Metspalu, M.4    Albrechtsen, A.5    Moltke, I.6    Rasmussen, S.7
  • 35
    • 84939864401 scopus 로고    scopus 로고
    • Genomic evidence for the Pleistocene and recent population history of Native Americans
    • Raghavan, Maanasa, Matthias Steinrücken, Kelley Harris, Stephan Schiffels, Simon Rasmussen, Michael DeGiorgio, Anders Albrechtsen, et al. 2015. Genomic evidence for the Pleistocene and recent population history of Native Americans. Science 349(6250):aab3884. doi:10.1126/science.aab3884.
    • (2015) Science , vol.349 , Issue.6250
    • Raghavan, M.1    Steinrücken, M.2    Harris, K.3    Schiffels, S.4    Rasmussen, S.5    Degiorgio, M.6    Albrechtsen, A.7
  • 37
    • 84893961036 scopus 로고    scopus 로고
    • The genome of a Late Pleistocene human from a Clovis burial site in western Montana
    • Rasmussen, Morten, Sarah L. Anzick, Michael R. Waters, Pontus Skoglund, Michael DeGiorgio, Thomas W. Stafford Jr., Simon Rasmussen, et al. 2014. The genome of a Late Pleistocene human from a Clovis burial site in western Montana. Nature 506(7487):225–229. doi:10.1038/nature13025.
    • (2014) Nature , vol.506 , Issue.7487 , pp. 225-229
    • Rasmussen, M.1    Anzick, S.L.2    Waters, M.R.3    Skoglund, P.4    Degiorgio, M.5    Stafford, T.W.6    Rasmussen, S.7
  • 38
    • 80053581951 scopus 로고    scopus 로고
    • An Aboriginal Australian genome reveals separate human dispersals into Asia
    • Rasmussen, Morten, Xiaosen Guo, Yong Wang, Kirk E. Lohmueller, Simon Rasmussen, Anders Albrechtsen, Line Skotte, et al. 2011. An Aboriginal Australian genome reveals separate human dispersals into Asia. Science 334(6052): 94–98. doi:10.1126/science.1211177.
    • (2011) Science , vol.334 , Issue.6052 , pp. 94-98
    • Rasmussen, M.1    Guo, X.2    Wang, Y.3    Lohmueller, K.E.4    Rasmussen, S.5    Albrechtsen, A.6    Skotte, L.7
  • 39
    • 78650850475 scopus 로고    scopus 로고
    • Genetic history of an archaic hominin group from Denisova Cave in Siberia
    • Reich, David, Richard E. Green, Martin Kircher, Johannes Krause, Nick Patterson, Eric Y. Durand, Bence Viola, et al. 2010. Genetic history of an archaic hominin group from Denisova Cave in Siberia. Nature 468(7327):1053–1060. doi:10.1038/nature09710.
    • (2010) Nature , vol.468 , Issue.7327 , pp. 1053-1060
    • Reich, D.1    Green, R.E.2    Kircher, M.3    Krause, J.4    Patterson, N.5    Durand, E.Y.6    Viola, B.7
  • 40
    • 80053899093 scopus 로고    scopus 로고
    • Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania
    • Reich, David, Nick Patterson, Martin Kircher, Frederick Delfin, Madhusudan R. Nandineni, Irina Pugach, Albert Min-Shan Ko, et al. 2011. Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania. American Journal of Human Genetics 89(4):516–528. doi:10.1016/j.ajhg.2011.09.005.
    • (2011) American Journal of Human Genetics , vol.89 , Issue.4 , pp. 516-528
    • Reich, D.1    Patterson, N.2    Kircher, M.3    Delfin, F.4    Nandineni, M.R.5    Pugach, I.6    Ko, A.M.-S.7
  • 41
    • 84956909090 scopus 로고    scopus 로고
    • Indigenous Arabs are descendants of the earliest split from ancient Eurasian populations
    • Rodriguez-Flores, Juan L., Khalid Fakhro, Francisco Agosto-Perez, Monica D. Ramstetter, Leonardo Arbiza, Thomas L. Vincent, Amal Robay, et al. 2016. Indigenous Arabs are descendants of the earliest split from ancient Eurasian populations. Genome Research 26(2):151–162. doi:10.1101/gr.191478.115.
    • (2016) Genome Research , vol.26 , Issue.2 , pp. 151-162
    • Rodriguez-Flores, J.L.1    Fakhro, K.2    Agosto-Perez, F.3    Ramstetter, M.D.4    Arbiza, L.5    Vincent, T.L.6    Robay, A.7
  • 42
    • 0036245438 scopus 로고    scopus 로고
    • Genealogical trees, coalescent theory and the analysis of genetic polymorphisms
    • Rosenberg, Noah A., and Magnus Nordborg. 2002. Genealogical trees, coalescent theory and the analysis of genetic polymorphisms. Nature Reviews Genetics 3(5):380–390. doi:10.1038/nrg795.
    • (2002) Nature Reviews Genetics , vol.3 , Issue.5 , pp. 380-390
    • Rosenberg, N.A.1    Nordborg, M.2
  • 43
    • 84975474808 scopus 로고    scopus 로고
    • The combined landscape of Denisovan and Neanderthal ancestry in present-day humans
    • Sankararaman, Sriram, Swapan Mallick, Nick Patterson, and David Reich. 2016. The combined landscape of Denisovan and Neanderthal ancestry in present-day humans. Current Biology 26(9):1241–1247. doi:10.1016/j.cub.2016.03.037.
    • (2016) Current Biology , vol.26 , Issue.9 , pp. 1241-1247
    • Sankararaman, S.1    Mallick, S.2    Patterson, N.3    Reich, D.4
  • 44
    • 84984636568 scopus 로고    scopus 로고
    • The mutation rate in human evolution and demographic inference. Genetics of human origin. Special issue, Current Opinion in Genetics and
    • Scally, Aylwyn. 2016. The mutation rate in human evolution and demographic inference. Genetics of human origin. Special issue, Current Opinion in Genetics and Development 41(December):36–43. doi:10.1016/j.gde.2016.07.008.
    • (2016) Development , vol.41 , Issue.December , pp. 36-43
    • Aylwyn, S.1
  • 45
    • 84905572361 scopus 로고    scopus 로고
    • Inferring human population size and separation history from multiple genome sequences
    • Schiffels, Stephan, and Richard Durbin. 2014. Inferring human population size and separation history from multiple genome sequences. Nature Genetics 46(8):919–925. doi:10.1038/ng.3015.
    • (2014) Nature Genetics , vol.46 , Issue.8 , pp. 919-925
    • Schiffels, S.1    Durbin, R.2
  • 46
    • 84914675035 scopus 로고    scopus 로고
    • Genomic structure in Europeans dating back at least 36,200 years
    • Seguin-Orlando, Andaine, Thorfinn S. Korneliussen, Martin Sikora, Anna-Sapfo Malaspinas, Andrea Manica, Ida Moltke, Anders Albrechtsen, et al. 2014. Genomic structure in Europeans dating back at least 36,200 years. Science 346(6213):1113–1118. doi:10.1126/science.aaa0114.
    • (2014) Science , vol.346 , Issue.6213 , pp. 1113-1118
    • Andaine, S.-O.1    Korneliussen, T.S.2    Sikora, M.3    Andrea Manica, A.-S.M.4    Anders Albrechtsen, I.M.5
  • 51
    • 84897583960 scopus 로고    scopus 로고
    • Resurrecting surviving Neandertal lineages from modern human genomes
    • Vernot, Benjamin, and Joshua M. Akey. 2014. Resurrecting surviving Neandertal lineages from modern human genomes. Science 343(6174):1017– 1021. doi:10.1126/science.1245938.
    • (2014) Science , vol.343 , Issue.6174 , pp. 1017-1021
    • Vernot, B.1    Akey, J.M.2
  • 52
    • 84924280285 scopus 로고    scopus 로고
    • Complex history of admixture between modern humans and Neandertals
    • Vernot, Benjamin, and Joshua M. Akey. 2015. Complex history of admixture between modern humans and Neandertals. American Journal of Human Genetics 96(3):448–453. doi:10.1016/j.ajhg.2015.01.006.
    • (2015) American Journal of Human Genetics , vol.96 , Issue.3 , pp. 448-453
    • Vernot, B.1    Akey, J.M.2
  • 53
    • 84961392375 scopus 로고    scopus 로고
    • Excavating Neandertal and Denisovan DNA from the genomes of Melanesian individuals
    • Vernot, Benjamin, Serena Tucci, Janet Kelso, Joshua G. Schraiber, Aaron B. Wolf, Rachel M. Gittelman, Michael Dannemann, et al. 2016. Excavating Neandertal and Denisovan DNA from the genomes of Melanesian individuals. Science 352(6282):235–239. doi:10.1126/science.aad9416.
    • (2016) Science , vol.352 , Issue.6282 , pp. 235-239
    • Vernot, B.1    Tucci, S.2    Kelso, J.3    Schraiber, J.G.4    Wolf, A.B.5    Gittelman, R.M.6    Dannemann, M.7


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