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Volumn 111, Issue 6, 2018, Pages 875-882

Kribbella podocarpi sp. nov., isolated from the leaves of a yellowwood tree (Podocarpus latifolius)

Author keywords

Endophyte; Family Nocardioidaceae; Multilocus sequence analysis

Indexed keywords

ADENINE; ARABINOSE; CARDIOLIPIN; CELLOBIOSE; DNA TOPOISOMERASE (ATP HYDROLYSING) B; GUANINE; HISTIDINE; HYPOXANTHINE; INULIN; MELIBIOSE; MENAQUINONE; METHIONINE; PEPTIDOGLYCAN; PHENYLALANINE; PHOSPHATIDYLCHOLINE; PHOSPHATIDYLGLYCEROL; PHOSPHATIDYLINOSITOL; RECA PROTEIN; RIBITOL; RNA 16S; RNA POLYMERASE BETA SUBUNIT; SALICIN; SUCROSE; TYROSINE; UREA; VALINE; XANTHINE; XYLAN; XYLOSE; BACTERIAL DNA;

EID: 85034222118     PISSN: 00036072     EISSN: 15729699     Source Type: Journal    
DOI: 10.1007/s10482-017-0984-6     Document Type: Article
Times cited : (8)

References (27)
  • 2
    • 0344034163 scopus 로고    scopus 로고
    • Rapid identification of filamentous actinomycetes to the genus level using genus-specific 16S-rRNA gene restriction fragment patterns
    • COI: 1:CAS:528:DC%2BD2cXhtF2hug%3D%3D, PID: 14657122
    • Cook AE, Meyers PR (2003) Rapid identification of filamentous actinomycetes to the genus level using genus-specific 16S-rRNA gene restriction fragment patterns. Int J Syst Evol Microbiol 53:1907–1915
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 1907-1915
    • Cook, A.E.1    Meyers, P.R.2
  • 3
    • 84868692443 scopus 로고    scopus 로고
    • Multilocus sequence analysis of the actinobacterial genus Kribbella
    • COI: 1:CAS:528:DC%2BC38Xhs12it7fJ, PID: 22981391
    • Curtis SM, Meyers PR (2012) Multilocus sequence analysis of the actinobacterial genus Kribbella. Syst Appl Microbiol 35:441–446
    • (2012) Syst Appl Microbiol , vol.35 , pp. 441-446
    • Curtis, S.M.1    Meyers, P.R.2
  • 4
    • 3042666256 scopus 로고    scopus 로고
    • MUSCLE: multiple sequence alignment with high accuracy and high throughput
    • COI: 1:CAS:528:DC%2BD2cXisF2ks7w%3D, PID: 15034147
    • Edgar RC (2004) MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res 32:1792–1797
    • (2004) Nucleic Acids Res , vol.32 , pp. 1792-1797
    • Edgar, R.C.1
  • 5
    • 80054100200 scopus 로고    scopus 로고
    • Evaluation of the use of recN sequence analysis in the phylogeny of the genus Amycolatopsis
    • PID: 21671192
    • Everest GJ, Cook AE, Kirby BM, Meyers PR (2011) Evaluation of the use of recN sequence analysis in the phylogeny of the genus Amycolatopsis. Antonie Van Leeuwenhoek 100:483–496
    • (2011) Antonie Van Leeuwenhoek , vol.100 , pp. 483-496
    • Everest, G.J.1    Cook, A.E.2    Kirby, B.M.3    Meyers, P.R.4
  • 6
    • 84885227987 scopus 로고    scopus 로고
    • Kribbella albertanoniae sp. nov., isolated from a Roman catacomb, and emended description of the genus Kribbella
    • COI: 1:CAS:528:DC%2BC3sXhvFegur7J, PID: 23584288
    • Everest GJ, Curtis SM, De Leo F, Urzí C, Meyers PR (2013) Kribbella albertanoniae sp. nov., isolated from a Roman catacomb, and emended description of the genus Kribbella. Int J Syst Evol Microbiol 63:3591–3596
    • (2013) Int J Syst Evol Microbiol , vol.63 , pp. 3591-3596
    • Everest, G.J.1    Curtis, S.M.2    De Leo, F.3    Urzí, C.4    Meyers, P.R.5
  • 7
    • 0021077093 scopus 로고
    • A rapid analysis for chemical grouping of aerobic actinomycetes
    • COI: 1:CAS:528:DyaL3sXmtV2isrw%3D
    • Hasegawa T, Takizawa M, Tanida S (1983) A rapid analysis for chemical grouping of aerobic actinomycetes. J Gen Appl Microbiol 29:319–322
    • (1983) J Gen Appl Microbiol , vol.29 , pp. 319-322
    • Hasegawa, T.1    Takizawa, M.2    Tanida, S.3
  • 8
    • 84876088663 scopus 로고    scopus 로고
    • Kribbella endophytica sp. nov., an endophytic actinobacterium isolated from the surface-sterilized leaf of a native apricot tree
    • COI: 1:CAS:528:DC%2BC3sXpslCmsL0%3D, PID: 22771686
    • Kaewkla O, Franco CMM (2013) Kribbella endophytica sp. nov., an endophytic actinobacterium isolated from the surface-sterilized leaf of a native apricot tree. Int J Syst Evol Microbiol 63:1249–12530
    • (2013) Int J Syst Evol Microbiol , vol.63 , pp. 1249-12530
    • Kaewkla, O.1    Franco, C.M.M.2
  • 9
    • 84979243119 scopus 로고    scopus 로고
    • Kribbella pittospori sp. nov., an endophytic actinobacterium isolated from the surface-sterilized leaf of a native apricot tree, Pittosporum angustifolium
    • COI: 1:CAS:528:DC%2BC1cXovF2mtg%3D%3D, PID: 26978036
    • Kaewkla O, Franco CMM (2016) Kribbella pittospori sp. nov., an endophytic actinobacterium isolated from the surface-sterilized leaf of a native apricot tree, Pittosporum angustifolium. Int J Syst Evol Microbiol 66:2284–2290
    • (2016) Int J Syst Evol Microbiol , vol.66 , pp. 2284-2290
    • Kaewkla, O.1    Franco, C.M.M.2
  • 10
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • COI: 1:CAS:528:DyaL3MXmtFSktg%3D%3D, PID: 7463489
    • Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16:111–120
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 11
    • 77953317503 scopus 로고    scopus 로고
    • Micromonospora tulbaghiae sp. nov., isolated from the leaves of wild garlic, Tulbaghia violacea
    • COI: 1:CAS:528:DC%2BC3cXpsFSqu7w%3D, PID: 19667372
    • Kirby BM, Meyers PR (2010) Micromonospora tulbaghiae sp. nov., isolated from the leaves of wild garlic, Tulbaghia violacea. Int J Syst Evol Microbiol 60:1328–1333
    • (2010) Int J Syst Evol Microbiol , vol.60 , pp. 1328-1333
    • Kirby, B.M.1    Meyers, P.R.2
  • 12
    • 77649181119 scopus 로고    scopus 로고
    • Phylogenetic analysis of the genus Kribbella based on the gyrB gene: proposal of a gyrB-sequence threshold for species delineation in the genus Kribbella
    • COI: 1:CAS:528:DC%2BC3cXjtlGjtA%3D%3D, PID: 19890733
    • Kirby BM, Everest GJ, Meyers PR (2010) Phylogenetic analysis of the genus Kribbella based on the gyrB gene: proposal of a gyrB-sequence threshold for species delineation in the genus Kribbella. Antonie Van Leeuwenhoek 97:131–142
    • (2010) Antonie Van Leeuwenhoek , vol.97 , pp. 131-142
    • Kirby, B.M.1    Everest, G.J.2    Meyers, P.R.3
  • 13
    • 77956800518 scopus 로고
    • Lipid and cell-wall analysis in bacterial systematics
    • COI: 1:CAS:528:DyaL1cXitFylt78%3D
    • Komagata K, Suzuki KL (1987) Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19:161–207
    • (1987) Methods Microbiol , vol.19 , pp. 161-207
    • Komagata, K.1    Suzuki, K.L.2
  • 14
    • 84943559450 scopus 로고    scopus 로고
    • Kribbella mirabilis sp. nov., isolated from rhizosphere soil of a herbaceous plant, Mirabilis jalapa L
    • COI: 1:CAS:528:DC%2BC2MXitVSjt7vL, PID: 26297172
    • Li D, Song J, Huang Y, Song S, Wu Y, Deng X (2015) Kribbella mirabilis sp. nov., isolated from rhizosphere soil of a herbaceous plant, Mirabilis jalapa L. Int J Syst Evol Microbiol 65:3143–3147
    • (2015) Int J Syst Evol Microbiol , vol.65 , pp. 3143-3147
    • Li, D.1    Song, J.2    Huang, Y.3    Song, S.4    Wu, Y.5    Deng, X.6
  • 17
    • 0032900531 scopus 로고    scopus 로고
    • Classification of ‘Nocardioides fulvus’ IFO 14399 and Nocardioides sp. ATCC 39419 in Kribbella gen. nov., as Kribbella flavida sp. nov. and Kribbella sandramycini sp. nov
    • COI: 1:CAS:528:DyaK1MXjt1Cqsrc%3D, PID: 10319498
    • Park YH, Yoon JH, Shin YK, Suzuki K, Kudo T, Seino A, Kim H, Lee JS, Lee ST (1999) Classification of ‘Nocardioides fulvus’ IFO 14399 and Nocardioides sp. ATCC 39419 in Kribbella gen. nov., as Kribbella flavida sp. nov. and Kribbella sandramycini sp. nov. Int J Syst Bacteriol 49:743–752
    • (1999) Int J Syst Bacteriol , vol.49 , pp. 743-752
    • Park, Y.H.1    Yoon, J.H.2    Shin, Y.K.3    Suzuki, K.4    Kudo, T.5    Seino, A.6    Kim, H.7    Lee, J.S.8    Lee, S.T.9
  • 19
    • 85011702142 scopus 로고    scopus 로고
    • Introducing a digital protologue: a timely move towards a database-driven systematics of archaea and bacteria
    • PID: 28168565
    • Rosselló-Móra R, Trujillo ME, Sutcliffe IC (2017) Introducing a digital protologue: a timely move towards a database-driven systematics of archaea and bacteria. Antonie Van Leeuwenhoek 110:455–456
    • (2017) Antonie Van Leeuwenhoek , vol.110 , pp. 455-456
    • Rosselló-Móra, R.1    Trujillo, M.E.2    Sutcliffe, I.C.3
  • 20
    • 0001023407 scopus 로고
    • Methods for characterization of Streptomyces species
    • Shirling EB, Gottlieb D (1966) Methods for characterization of Streptomyces species. Int J Syst Bacteriol 16:313–340
    • (1966) Int J Syst Bacteriol , vol.16 , pp. 313-340
    • Shirling, E.B.1    Gottlieb, D.2
  • 21
    • 0041309729 scopus 로고    scopus 로고
    • Transfer of Hongia koreensis Lee et al. 2000 to the genus Kribbella Park et al. 1999 as Kribbella koreensis comb. nov
    • COI: 1:CAS:528:DC%2BD3sXmsF2isbg%3D, PID: 12892118
    • Sohn K, Hong SG, Bae KS, Chun J (2003) Transfer of Hongia koreensis Lee et al. 2000 to the genus Kribbella Park et al. 1999 as Kribbella koreensis comb. nov. Int J Syst Evol Microbiol 53:1005–1007
    • (2003) Int J Syst Evol Microbiol , vol.53 , pp. 1005-1007
    • Sohn, K.1    Hong, S.G.2    Bae, K.S.3    Chun, J.4
  • 22
    • 85016954857 scopus 로고    scopus 로고
    • Kribbella deserti sp. nov., isolated from rhizosphere soil of Ammopiptanthus mongolicus
    • PID: 27902295
    • Sun JQ, Xu L, Guo Y, Li WL, Shao ZQ, Yang YL, Wu XL (2017) Kribbella deserti sp. nov., isolated from rhizosphere soil of Ammopiptanthus mongolicus. Int J Syst Evol Microbiol 67:692–696
    • (2017) Int J Syst Evol Microbiol , vol.67 , pp. 692-696
    • Sun, J.Q.1    Xu, L.2    Guo, Y.3    Li, W.L.4    Shao, Z.Q.5    Yang, Y.L.6    Wu, X.L.7
  • 23
    • 84890330527 scopus 로고    scopus 로고
    • MEGA6: molecular evolutionary genetics analysis version 6.0
    • COI: 1:CAS:528:DC%2BC3sXhvVKhurzP, PID: 24132122
    • Tamura K, Stecher G, Peterson D, Filipski A, Kumar S (2013) MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30:2725–2729
    • (2013) Mol Biol Evol , vol.30 , pp. 2725-2729
    • Tamura, K.1    Stecher, G.2    Peterson, D.3    Filipski, A.4    Kumar, S.5
  • 24
    • 33244484116 scopus 로고    scopus 로고
    • Kribbella lupini sp. nov., isolated from the roots of Lupinus angustifolius
    • COI: 1:CAS:528:DC%2BD28XislKhtb8%3D, PID: 16449448
    • Trujillo ME, Kroppenstedt RM, Schumann P, Martinez-Molina E (2006) Kribbella lupini sp. nov., isolated from the roots of Lupinus angustifolius. Int J Syst Evol Microbiol 56:407–411
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 407-411
    • Trujillo, M.E.1    Kroppenstedt, R.M.2    Schumann, P.3    Martinez-Molina, E.4
  • 27
    • 85037715645 scopus 로고    scopus 로고
    • Introducing EzBioCloud: a taxonomically united database of 16S rRNA and whole genome assemblies
    • PID: 28005526
    • Yoon SH, Ha SM, Kwon S, Lim J, Kim Y, Seo H, Chun J (2017) Introducing EzBioCloud: a taxonomically united database of 16S rRNA and whole genome assemblies. Int J Syst Evol Microbiol 67:1613–1617
    • (2017) Int J Syst Evol Microbiol , vol.67 , pp. 1613-1617
    • Yoon, S.H.1    Ha, S.M.2    Kwon, S.3    Lim, J.4    Kim, Y.5    Seo, H.6    Chun, J.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.