Extracting brain connectivity from diffusion MRI [Life sciences]

IEEE Signal Processing Magazine

Volumn 24, Issue 6, 2007, Pages

  Westin, Carl Fredrik ^a  

^a NONE

Author keywords

[No Author keywords available]

Indexed keywords

BRAIN; FEATURE EXTRACTION; STOCHASTIC MODELS; TISSUE; VISUALIZATION;

DIFFUSION MAGNETIC RESONANCE IMAGING; TRACTOGRAPHY; WHITE MATTER;

MAGNETIC RESONANCE IMAGING;

EID: 85032750936     PISSN: 10535888     EISSN: None     Source Type: Journal    
DOI: 10.1109/MSP.2007.906454     Document Type: Article

References (16)

1. A. Fick, "Cher diffusion," Ann Phys, pp. 94-59, 1855.
2. A. Einstein, "Über die von der molekularkinetischen Theorie der Wärme geforderte Bewegung von in ruhenden Flüssigkeiten suspendierten Teilchen," Annalen der Physik, vol. 17, pp. 549-560, 1905.
3. P.J. Basser, "Inferring microstructural features and the physiological state of tissues from diffusion-weighted images," NMR Biomedicine vol. 8, pp. 333-344, 1995.
4. E.O. Stejskal and J.E. Tanner, "Spin diffusion measurements: Spin echoes in the presence of a time-dependent field gradient," J. Chem. Phys., vol. 42, pp. 288-292, 1965.
5. D. Tuch, T. Reese, M. Wiegell, N. Makris, J. Belliveau, and V. Wedeen, "High angular resolution diffusion imaging reveals intravoxel white matter fiber heterogeneity," Magnetic Resonance Med., vol. 48, no. 4, pp. 577-582, 2002.
6. P.J. Basser, S. Pajevic, C. Pierpaoli, J. Duda, and A. Aldroubi, "In vivo fiber tractography using DT-MRI data," Magnetic Resonance Med. vol. 44, pp. 625-632, 2000.
7. T.E. Conturo, N.F. Lori, T.S. Cull, E. Akbuda, A.Z. Snyder, J.S. Shimony, R.C. McKinstry, H. Burton, and A.E. Raichle, "Tracking neuronal fiber pathways in the living human brain," Neurobiology, vol. 96, pp. 10,422-10,427, 1999.
8. H. Gray, Anatomy of the Human Body. Bartleby, 20th ed edition, 1918. Bartleby.com Great Books Online: http://bartleby.com/107/ illus751.html.
9. A. Brun, M. Björnemo, R. Kikinis, and C.-F. Westin, "White matter tractography using sequential importance sampling," in Proc. ISMRM Annu. Meeting (ISMRH'02), Honolulu, Hawaii, May 2002.
10. T. Behrens, M. Woolrich, M. Jenkinson, H. Johansen-Berg, R. Nunes, S. Clare, P. Matthews, J.M. Brady, and S. Smith, "Characterization and propagation of uncertainty in diffusion-weighted MR imaging," Magnetic Resonance Med., vol. 50, pp. 1077-1088, 2003.
11. M. Lazar and A. Alexander. "Bootstrap white matter tractography (boot-trac)," NeuroImage, vol. 24, no. 2, pp. 524-532, 2005.
12. O. Friman, G. Farneback, and C.-F. Westin, "A Bayesian approach for stochastic white matter tractography," IEEE Trans. Med. Imaging, vol. 25, no. 8, pp. 965-978, 2006.
13. A. Doucet, N. de Freitas, and N. Gordon, editors. Sequential Monte Carlo Methods in Practice. New York: Springer-Verlag, 2001.
14. A. Brun, H. Knutsson, H.J. Park, M.E. Shenton, and C.-F. Westin, "Clustering fiber tracts using normalized cuts," in Proc. 7th Int. Conf. Medical Image Computing and Computer-Assisted Intervention (MICCAI'04), Rennes-Saint Malo, France, Sept. 2004, pp. 368-375.
15. L. O'Donnell and C.-F. Westin, "White matter tract clustering and correspondence in populations," in Proc. 8th Int. Conf. Medical Image Computing and Computer-Assisted Intervention (MICCAI'05), Palm Springs, CA, Oct. 2005, pp. 140-147.
16. L. O'Donnell, M. Kubicki, M.E. Shenton, M. Dreusicke, W.E.L. Grimson, and C.-F. Westin, "A method for clustering white matter fiber tracts," Amer. J. Neuroradiology, vol. 27, no. 5, pp. 1032-1036, 2006.