-
2
-
-
49749137527
-
Zika virus: a report on three cases of human infection during an epidemic of jaundice in Nigeria
-
MacNamara FN. Zika virus: a report on three cases of human infection during an epidemic of jaundice in Nigeria. Trans R Soc Trop Med Hyg. 1954; 48:139–145.
-
(1954)
Trans R Soc Trop Med Hyg
, vol.48
, pp. 139-145
-
-
MacNamara, F.N.1
-
3
-
-
67149088928
-
Zika virus outbreak on Yap island, federated states of Micronesia
-
Duffy MR, Chen T-H, Hancock WT, et al. Zika virus outbreak on Yap island, federated states of Micronesia. N Eng J Med. 2009; 360:2536–2543.
-
(2009)
N Eng J Med
, vol.360
, pp. 2536-2543
-
-
Duffy, M.R.1
Chen, T.-H.2
Hancock, W.T.3
-
4
-
-
33947379655
-
Full-length sequencing and genomic characterization of Bagaza, Kedougou, and Zika viruses
-
Kuno G, Chang GJ. Full-length sequencing and genomic characterization of Bagaza, Kedougou, and Zika viruses. Arch Virol. 2007; 152:687–696.
-
(2007)
Arch Virol
, vol.152
, pp. 687-696
-
-
Kuno, G.1
Chang, G.J.2
-
6
-
-
49749156769
-
A simple technique for infection of mosquitoes with viruses transmission of Zika virus
-
Boorman JPT, Porterfield JS. A simple technique for infection of mosquitoes with viruses transmission of Zika virus. Trans R Soc Trop Med Hyg. 1956; 50:238–242.
-
(1956)
Trans R Soc Trop Med Hyg
, vol.50
, pp. 238-242
-
-
Boorman, J.P.T.1
Porterfield, J.S.2
-
7
-
-
48749131500
-
Twelve isolations of Zika virus from Aedes (Stegomyla) africanus (Theobald) taken in and above a Uganda forest
-
Haddow AJW, Williams MC, Woodall JP, Simpson DIH, Goma LKH. Twelve isolations of Zika virus from Aedes (Stegomyla) africanus (Theobald) taken in and above a Uganda forest. Bull Wid Health Org. 1964; 31:69.
-
(1964)
Bull Wid Health Org
, vol.31
, pp. 69
-
-
Haddow, A.J.W.1
Williams, M.C.2
Woodall, J.P.3
Simpson, D.I.H.4
Goma, L.K.H.5
-
8
-
-
0018616782
-
Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State
-
Fagbami AH. Zika virus infections in Nigeria: virological and seroepidemiological investigations in Oyo State. Epidemiol Infect. 1979; 83:213–219.
-
(1979)
Epidemiol Infect
, vol.83
, pp. 213-219
-
-
Fagbami, A.H.1
-
9
-
-
84993991632
-
Potential use of saliva samples to diagnose Zika virus infection
-
Tauro LB, Bandeira AC, Ribeiro GS, et al. Potential use of saliva samples to diagnose Zika virus infection. J Med Virol. 2017; 89:1–2.
-
(2017)
J Med Virol
, vol.89
, pp. 1-2
-
-
Tauro, L.B.1
Bandeira, A.C.2
Ribeiro, G.S.3
-
10
-
-
85024132534
-
Molecular detection of Zika virus in blood and RNA load determination during the French Polynesian outbreak
-
Musso D, Rouault E, Teissier A, et al. Molecular detection of Zika virus in blood and RNA load determination during the French Polynesian outbreak. J Med Virol. 2016; 89:1505–1510.
-
(2016)
J Med Virol
, vol.89
, pp. 1505-1510
-
-
Musso, D.1
Rouault, E.2
Teissier, A.3
-
11
-
-
84961114834
-
Zika virus outbreak and the case for building effective and sustainable rapid diagnostics laboratory capacity globally
-
Zumla A, Goodfellow I, Kasolo F, et al. Zika virus outbreak and the case for building effective and sustainable rapid diagnostics laboratory capacity globally. Int J Infect Dis. 2016; 45:92–94.
-
(2016)
Int J Infect Dis
, vol.45
, pp. 92-94
-
-
Zumla, A.1
Goodfellow, I.2
Kasolo, F.3
-
12
-
-
84959283609
-
Zika virus associated with microcephaly
-
Mlakar J, Korva M, Tul N, et al. Zika virus associated with microcephaly. N Engl J Med. 2016; 374:951–958.
-
(2016)
N Engl J Med
, vol.374
, pp. 951-958
-
-
Mlakar, J.1
Korva, M.2
Tul, N.3
-
13
-
-
85016141754
-
The structure of Zika virus NS5 reveals a conserved domain conformation
-
Wang B, Tan X-F, Thurmond S, et al. The structure of Zika virus NS5 reveals a conserved domain conformation. Nat Commun. 2017; 8:14763.
-
(2017)
Nat Commun
, vol.8
, pp. 14763
-
-
Wang, B.1
Tan, X.-F.2
Thurmond, S.3
-
14
-
-
85015344807
-
Crystal structure of full-length Zika virus NS5 protein reveals a conformation similar to Japanese encephalitis virus NS5
-
Upadhyay AK, Cyr M, Longenecker K, Tripathi R, Sun C, Kempf DJ. Crystal structure of full-length Zika virus NS5 protein reveals a conformation similar to Japanese encephalitis virus NS5. Acta Crystallogr F Struct Biol Commun. 2017; 73:116–122.
-
(2017)
Acta Crystallogr F Struct Biol Commun
, vol.73
, pp. 116-122
-
-
Upadhyay, A.K.1
Cyr, M.2
Longenecker, K.3
Tripathi, R.4
Sun, C.5
Kempf, D.J.6
-
15
-
-
85013276209
-
Quantitative structure-activity relationship and molecular docking revealed a potency of anti-hepatitis C virus drugs against human corona viruses
-
Elfiky AA, Mahdy SM, Elshemey WM. Quantitative structure-activity relationship and molecular docking revealed a potency of anti-hepatitis C virus drugs against human corona viruses. J Med Virol. 2017; 89:1040–1047.
-
(2017)
J Med Virol
, vol.89
, pp. 1040-1047
-
-
Elfiky, A.A.1
Mahdy, S.M.2
Elshemey, W.M.3
-
16
-
-
84872683113
-
Molecular modeling comparison of the performance of NS5b polymerase inhibitor (PSI-7977) on prevalent HCV genotypes
-
Elfiky AA, Elshemey WM, Gawad WA, Desoky OS. Molecular modeling comparison of the performance of NS5b polymerase inhibitor (PSI-7977) on prevalent HCV genotypes. Protein J. 2013; 32:75–80.
-
(2013)
Protein J
, vol.32
, pp. 75-80
-
-
Elfiky, A.A.1
Elshemey, W.M.2
Gawad, W.A.3
Desoky, O.S.4
-
17
-
-
84941038188
-
RNA-dependent RNA polymerases of picornaviruses: from the structure to regulatory mechanisms
-
Ferrer-Orta C, Ferrero D, Verdaguer N. RNA-dependent RNA polymerases of picornaviruses: from the structure to regulatory mechanisms. Viruses. 2015; 7:4438–4460.
-
(2015)
Viruses
, vol.7
, pp. 4438-4460
-
-
Ferrer-Orta, C.1
Ferrero, D.2
Verdaguer, N.3
-
18
-
-
85015416301
-
Applications of computer-aided approaches in the development of hepatitis C antiviral agents
-
Ganesan A, Barakat K. Applications of computer-aided approaches in the development of hepatitis C antiviral agents. Expert Opin Drug Discov. 2017; 12:407–425.
-
(2017)
Expert Opin Drug Discov
, vol.12
, pp. 407-425
-
-
Ganesan, A.1
Barakat, K.2
-
19
-
-
84960158342
-
IDX-184 is a superior HCV direct-acting antiviral drug: a QSAR study
-
Elfiky AA, Elshemey WM. IDX-184 is a superior HCV direct-acting antiviral drug: a QSAR study. Med Chem Res. 2016; 25:1005–1008.
-
(2016)
Med Chem Res
, vol.25
, pp. 1005-1008
-
-
Elfiky, A.A.1
Elshemey, W.M.2
-
20
-
-
84925270533
-
2′-Methylguanosine prodrug (IDX-184), phosphoramidate prodrug (Sofosbuvir), diisobutyryl prodrug (R7128) are better than their parent nucleotides and ribavirin in hepatitis C virus inhibition: a molecular modeling study
-
Elfiky AA, Elshemey WM, Gawad WA. 2′-Methylguanosine prodrug (IDX-184), phosphoramidate prodrug (Sofosbuvir), diisobutyryl prodrug (R7128) are better than their parent nucleotides and ribavirin in hepatitis C virus inhibition: a molecular modeling study. J Comput Theoretical Nanosci. 2015; 12:376–386.
-
(2015)
J Comput Theoretical Nanosci
, vol.12
, pp. 376-386
-
-
Elfiky, A.A.1
Elshemey, W.M.2
Gawad, W.A.3
-
21
-
-
84904756999
-
Daclatasvir plus sofosbuvir for HCV infection: an oral combination therapy with high antiviral efficacy
-
Asselah T. Daclatasvir plus sofosbuvir for HCV infection: an oral combination therapy with high antiviral efficacy. J Hepatol. 2014; 61:435–438.
-
(2014)
J Hepatol
, vol.61
, pp. 435-438
-
-
Asselah, T.1
-
22
-
-
85024487104
-
Hepatitis C viral polymerase inhibition using directly acting antivirals, a computational approach
-
In, A M, ed., Jersey city, NJ, USA, Austin Publishing group
-
Elfiky AA, Gawad WA, Elshemey WM. Hepatitis C viral polymerase inhibition using directly acting antivirals, a computational approach. In: A M, ed. Software and Techniques for Bio-Molecular Modeling. Jersey city, NJ, USA: Austin Publishing group; 2016: 197.
-
(2016)
Software and Techniques for Bio-Molecular Modeling
, pp. 197
-
-
Elfiky, A.A.1
Gawad, W.A.2
Elshemey, W.M.3
-
23
-
-
84890757693
-
Sofosbuvir for the treatment of hepatitis C virus
-
Asselah T. Sofosbuvir for the treatment of hepatitis C virus. Expert Opin Pharmacother. 2014; 15:121–130.
-
(2014)
Expert Opin Pharmacother
, vol.15
, pp. 121-130
-
-
Asselah, T.1
-
24
-
-
85000415085
-
The FDA-approved drug sofosbuvir inhibits Zika virus infection
-
Bullard-Feibelman KM, Govero J, Zhu Z, et al. The FDA-approved drug sofosbuvir inhibits Zika virus infection. Antivir Res. 2017; 137:134–140.
-
(2017)
Antivir Res
, vol.137
, pp. 134-140
-
-
Bullard-Feibelman, K.M.1
Govero, J.2
Zhu, Z.3
-
25
-
-
84988421322
-
Zika viral polymerase inhibition using anti-HCV drugs both in market and under clinical trials
-
Elfiky AA. Zika viral polymerase inhibition using anti-HCV drugs both in market and under clinical trials. J Med Virol. 2016; 88:2044–2051.
-
(2016)
J Med Virol
, vol.88
, pp. 2044-2051
-
-
Elfiky, A.A.1
-
26
-
-
85010023391
-
The clinically approved antiviral drug sofosbuvir impairs Brazilian Zika virus replication
-
Article 40920
-
Sacramento CQ, de Melo GR, Rocha N, et al. The clinically approved antiviral drug sofosbuvir impairs Brazilian Zika virus replication. bioRxiv. 2016; 7:1–12. Article no. 40920.
-
(2016)
bioRxiv
, vol.7
, pp. 1-12
-
-
Sacramento, C.Q.1
de Melo, G.R.2
Rocha, N.3
-
27
-
-
85024475880
-
Molecular modeling and docking revealed superiority of IDX-184 as HCV polymerase inhibitor
-
Elfiky AA, Ismail AM. Molecular modeling and docking revealed superiority of IDX-184 as HCV polymerase inhibitor. Future Virol. 2017; 12:339–347.
-
(2017)
Future Virol
, vol.12
, pp. 339-347
-
-
Elfiky, A.A.1
Ismail, A.M.2
-
28
-
-
0003653899
-
Molecular dynamics simulation methods
-
2nd ed, England, Prentice Hall
-
Leach A. 2001. Molecular dynamics simulation methods. 2nd ed. Molecular Modelling: Principles and Applications. England: Prentice Hall; 353–406.
-
(2001)
Molecular Modelling: Principles and Applications
, pp. 353-406
-
-
Leach, A.1
-
29
-
-
84925279170
-
Theoretical study on modified boceprevir compounds as NS3 protease inhibitors
-
Saleh NA, Ezat AA, Elfiky AA, Elshemey WM, Ibrahim M. Theoretical study on modified boceprevir compounds as NS3 protease inhibitors. J Comput Theoretical Nanosci. 2015; 12:371–375.
-
(2015)
J Comput Theoretical Nanosci
, vol.12
, pp. 371-375
-
-
Saleh, N.A.1
Ezat, A.A.2
Elfiky, A.A.3
Elshemey, W.M.4
Ibrahim, M.5
-
30
-
-
84892405001
-
The electronic and quantitative structure activity relationship properties of modified telaprevir compounds as HCV NS3 protease inhibitors
-
Saleh NA, Elfiky AA, Ezat AA, Elshemey WM, Ibrahim M. The electronic and quantitative structure activity relationship properties of modified telaprevir compounds as HCV NS3 protease inhibitors. J Comput Theoretical Nanosci. 2014; 11:544–548.
-
(2014)
J Comput Theoretical Nanosci
, vol.11
, pp. 544-548
-
-
Saleh, N.A.1
Elfiky, A.A.2
Ezat, A.A.3
Elshemey, W.M.4
Ibrahim, M.5
-
31
-
-
73749087546
-
Structural and electronic properties of new fullerene derivatives and their possible application as HIV-1 protease inhibitors
-
Ibrahim M, Saleh NA, Hameed AJ, Elshemey WM, Elsayed AA. Structural and electronic properties of new fullerene derivatives and their possible application as HIV-1 protease inhibitors. Spectrochim Acta A Mol Biomol Spectrosc. 2010; 75:702–709.
-
(2010)
Spectrochim Acta A Mol Biomol Spectrosc
, vol.75
, pp. 702-709
-
-
Ibrahim, M.1
Saleh, N.A.2
Hameed, A.J.3
Elshemey, W.M.4
Elsayed, A.A.5
-
32
-
-
84912061839
-
The QSAR and docking calculations of fullerene derivatives as HIV-1 protease inhibitors
-
Saleh NA. The QSAR and docking calculations of fullerene derivatives as HIV-1 protease inhibitors. Spectrochim Acta A Mol Biomol Spectrosc. 2014; 136PC:1523–1529.
-
(2014)
Spectrochim Acta A Mol Biomol Spectrosc
, vol.136 PC
, pp. 1523-1529
-
-
Saleh, N.A.1
-
33
-
-
84865738386
-
Hexapeptide functionality of cellulose as NS3 protease inhibitors
-
Ibrahim M, Saleh NA, Elshemey WM, Elsayed AA. Hexapeptide functionality of cellulose as NS3 protease inhibitors. Med Chem. 2012; 8:826–830.
-
(2012)
Med Chem
, vol.8
, pp. 826-830
-
-
Ibrahim, M.1
Saleh, N.A.2
Elshemey, W.M.3
Elsayed, A.A.4
-
34
-
-
27344436659
-
Scalable molecular dynamics with NAMD
-
Phillips JC, Braun R, Wang W, et al. Scalable molecular dynamics with NAMD. J Comput Chem. 2005; 26:1781–1802.
-
(2005)
J Comput Chem
, vol.26
, pp. 1781-1802
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
-
35
-
-
33750014560
-
Solvated docking: introducing water into the modelling of biomolecular complexes
-
van Dijk AD, Bonvin AM. Solvated docking: introducing water into the modelling of biomolecular complexes. Bioinformatics. 2006; 22:2340–2347.
-
(2006)
Bioinformatics
, vol.22
, pp. 2340-2347
-
-
van Dijk, A.D.1
Bonvin, A.M.2
-
37
-
-
84978375335
-
Water determines the structure and dynamics of proteins
-
Bellissent-Funel M-C, Hassanali A, Havenith M, et al. Water determines the structure and dynamics of proteins. Chem Rev. 2016; 116:7673–7697.
-
(2016)
Chem Rev
, vol.116
, pp. 7673-7697
-
-
Bellissent-Funel, M.-C.1
Hassanali, A.2
Havenith, M.3
-
39
-
-
63849246525
-
Protein structure prediction on the web: a case study using the Phyre server
-
Kelley LA, Sternberg MJ. Protein structure prediction on the web: a case study using the Phyre server. Nat Protoc. 2009; 4:363–371.
-
(2009)
Nat Protoc
, vol.4
, pp. 363-371
-
-
Kelley, L.A.1
Sternberg, M.J.2
-
41
-
-
0024804228
-
Molecular mechanics. The MM3 force field for hydrocarbons. 3. The van der Waals’ potentials and crystal data for aliphatic and aromatic hydrocarbons
-
Lii JH, Allinger NL. Molecular mechanics. The MM3 force field for hydrocarbons. 3. The van der Waals’ potentials and crystal data for aliphatic and aromatic hydrocarbons. J Am Chem Soc. 1989; 111:8576–8582.
-
(1989)
J Am Chem Soc
, vol.111
, pp. 8576-8582
-
-
Lii, J.H.1
Allinger, N.L.2
-
42
-
-
0000189651
-
Density-functional thermochemistry. III. The role of exact exchange
-
Becke AD. Density-functional thermochemistry. III. The role of exact exchange. J Chem Phys. 1993; 98:5648–5652.
-
(1993)
J Chem Phys
, vol.98
, pp. 5648-5652
-
-
Becke, A.D.1
-
43
-
-
85034063406
-
Zika virus: novel guanosine derivatives revealed strong binding and possible inhibition of the polymerase
-
In press
-
Elfiky AA. Zika virus: novel guanosine derivatives revealed strong binding and possible inhibition of the polymerase. Future Virol. 2017; In press.
-
(2017)
Future Virol
-
-
Elfiky, A.A.1
-
44
-
-
76149120388
-
AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading
-
Trott O, Olson AJ. AutoDock Vina: improving the speed and accuracy of docking with a new scoring function, efficient optimization, and multithreading. J Comput Chem. 2010; 31:455–461.
-
(2010)
J Comput Chem
, vol.31
, pp. 455-461
-
-
Trott, O.1
Olson, A.J.2
-
45
-
-
85011602101
-
A structural view of the RNA-dependent RNA polymerases from the Flavivirus genus
-
Lu G, Gong P. A structural view of the RNA-dependent RNA polymerases from the Flavivirus genus. Virus Res. 2017; 234:34–43.
-
(2017)
Virus Res
, vol.234
, pp. 34-43
-
-
Lu, G.1
Gong, P.2
-
47
-
-
67849109995
-
Solvent accessible surface area approximations for rapid and accurate protein structure prediction
-
Durham E, Dorr B, Woetzel N, Staritzbichler R, Meiler J. Solvent accessible surface area approximations for rapid and accurate protein structure prediction. J Mol Model. 2009; 15:1093–1108.
-
(2009)
J Mol Model
, vol.15
, pp. 1093-1108
-
-
Durham, E.1
Dorr, B.2
Woetzel, N.3
Staritzbichler, R.4
Meiler, J.5
-
48
-
-
85034049549
-
IDX-184 is a superior HCV direct-acting antiviral drug: a QSAR study
-
Elfiky AA, Elshemey WM. IDX-184 is a superior HCV direct-acting antiviral drug: a QSAR study. Med Chem Res. 2016;90:1–4.
-
(2016)
Med Chem Res
, vol.90
, pp. 1-4
-
-
Elfiky, A.A.1
Elshemey, W.M.2
-
49
-
-
80054078476
-
Fast, scalable generation of high-quality protein multiple sequence alignments using clustal omega
-
Sievers F, Wilm A, Dineen D, et al. Fast, scalable generation of high-quality protein multiple sequence alignments using clustal omega. Mol Syst Biol. 2011; 7:539.
-
(2011)
Mol Syst Biol
, vol.7
, pp. 539
-
-
Sievers, F.1
Wilm, A.2
Dineen, D.3
-
50
-
-
84904790793
-
Deciphering key features in protein structures with the new ENDscript server
-
Robert X, Gouet P. Deciphering key features in protein structures with the new ENDscript server. Nucleic Acids Res. 2014; 42:W320–W324.
-
(2014)
Nucleic Acids Res
, vol.42
, pp. W320-W324
-
-
Robert, X.1
Gouet, P.2
|