-
1
-
-
80053618114
-
Linking long-term dietary patterns with gut microbial enterotypes
-
Wu GD, Chen J, Hoffmann C, Bittinger K, Chen YY, Keilbaugh SA, Bewtra M, Knights D, Walters WA, Knight R, Sinha R, Gilroy E, Gupta K, Baldassano R, Nessel L, Li H, Bushman FD, Lewis JD. 2011. Linking long-term dietary patterns with gut microbial enterotypes. Science 334: 105-108. http://dx.doi.org/10.1126/science.1208344.
-
(2011)
Science
, vol.334
, pp. 105-108
-
-
Wu, G.D.1
Chen, J.2
Hoffmann, C.3
Bittinger, K.4
Chen, Y.Y.5
Keilbaugh, S.A.6
Bewtra, M.7
Knights, D.8
Walters, W.A.9
Knight, R.10
Sinha, R.11
Gilroy, E.12
Gupta, K.13
Baldassano, R.14
Nessel, L.15
Li, H.16
Bushman, F.D.17
Lewis, J.D.18
-
2
-
-
84933501802
-
Glycan complexity dictates microbial resource allocation in the large intestine
-
Rogowski A, Briggs JA, Mortimer JC, Tryfona T, Terrapon N, Lowe EC, Baslé A, Morland C, Day AM, Zheng H, Rogers TE, Thompson P, Hawkins AR, Yadav MP, Henrissat B, Martens EC, Dupree P, Gilbert HJ, Bolam DN. 2015. Glycan complexity dictates microbial resource allocation in the large intestine. Nat Commun 6:7481. http://dx.doi.org/10.1038/ncomms8481.
-
(2015)
Nat Commun
, vol.6
, pp. 7481
-
-
Rogowski, A.1
Briggs, J.A.2
Mortimer, J.C.3
Tryfona, T.4
Terrapon, N.5
Lowe, E.C.6
Baslé, A.7
Morland, C.8
Day, A.M.9
Zheng, H.10
Rogers, T.E.11
Thompson, P.12
Hawkins, A.R.13
Yadav, M.P.14
Henrissat, B.15
Martens, E.C.16
Dupree, P.17
Gilbert, H.J.18
Bolam, D.N.19
-
3
-
-
84910138842
-
Starving our microbial self: The deleterious consequences of a diet deficient in microbiota-accessible carbohydrates
-
Sonnenburg ED, Sonnenburg JL. 2014. Starving our microbial self: the deleterious consequences of a diet deficient in microbiota-accessible carbohydrates. Cell Metab 20:779-786. http://dx.doi.org/10.1016/j.cmet.2014.07.003.
-
(2014)
Cell Metab
, vol.20
, pp. 779-786
-
-
Sonnenburg, E.D.1
Sonnenburg, J.L.2
-
4
-
-
84939567027
-
Influence of galacto-oligosaccharide mixture (B-GOS) on gut microbiota, immune parameters and metabonomics in elderly persons
-
Vulevic J, Juric A, Walton GE, Claus SP, Tzortzis G, Toward RE, Gibson GR. 2015. Influence of galacto-oligosaccharide mixture (B-GOS) on gut microbiota, immune parameters and metabonomics in elderly persons. Br J Nutr 114:586-595. http://dx.doi.org/10.1017/S0007114515001889.
-
(2015)
Br J Nutr
, vol.114
, pp. 586-595
-
-
Vulevic, J.1
Juric, A.2
Walton, G.E.3
Claus, S.P.4
Tzortzis, G.5
Toward, R.E.6
Gibson, G.R.7
-
5
-
-
84892828465
-
Diet rapidly and reproducibly alters the human gut microbiome
-
David LA, Maurice CF, Carmody RN, Gootenberg DB, Button JE, Wolfe BE, Ling AV, Devlin AS, Varma Y, Fischbach MA, Biddinger SB, Dutton RJ, Turnbaugh PJ. 2014. Diet rapidly and reproducibly alters the human gut microbiome. Nature 505:559-563. http://dx.doi.org/10.1038/nature12820.
-
(2014)
Nature
, vol.505
, pp. 559-563
-
-
David, L.A.1
Maurice, C.F.2
Carmody, R.N.3
Gootenberg, D.B.4
Button, J.E.5
Wolfe, B.E.6
Ling, A.V.7
Devlin, A.S.8
Varma, Y.9
Fischbach, M.A.10
Biddinger, S.B.11
Dutton, R.J.12
Turnbaugh, P.J.13
-
6
-
-
33644816151
-
Diet and functional gastrointestinal disorders: A population-based casecontrol study
-
Saito YA, Locke GR, III, Weaver AL, Zinsmeister AR, Talley NJ. 2005. Diet and functional gastrointestinal disorders: a population-based casecontrol study. Am J Gastroenterol 100:2743-2748. http://dx.doi.org/10.1111/j.1572-0241.2005.00288.x.
-
(2005)
Am J Gastroenterol
, vol.100
, pp. 2743-2748
-
-
Saito, Y.A.1
Locke, G.R.2
Weaver, A.L.3
Zinsmeister, A.R.4
Talley, N.J.5
-
7
-
-
84890685902
-
A diet low in FODMAPs reduces symptoms of irritable bowel syndrome
-
e5
-
Halmos EP, Power VA, Shepherd SJ, Gibson PR, Muir JG. 2014. A diet low in FODMAPs reduces symptoms of irritable bowel syndrome. Gastroenterology 146:67-75.e5. http://dx.doi.org/10.1053/j.gastro.2013.09.046.
-
(2014)
Gastroenterology
, vol.146
, pp. 67-75
-
-
Halmos, E.P.1
Power, V.A.2
Shepherd, S.J.3
Gibson, P.R.4
Muir, J.G.5
-
8
-
-
84908233518
-
Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men
-
Salonen A, Lahti L, Salojärvi J, Holtrop G, Korpela K, Duncan SH, Date P, Farquharson F, Johnstone AM, Lobley GE, Louis P, Flint HJ, de Vos WM. 2014. Impact of diet and individual variation on intestinal microbiota composition and fermentation products in obese men. ISME J 8:2218-2230. http://dx.doi.org/10.1038/ismej.2014.63.
-
(2014)
ISME J
, vol.8
, pp. 2218-2230
-
-
Salonen, A.1
Lahti, L.2
Salojärvi, J.3
Holtrop, G.4
Korpela, K.5
Duncan, S.H.6
Date, P.7
Farquharson, F.8
Johnstone, A.M.9
Lobley, G.E.10
Louis, P.11
Flint, H.J.12
De Vos, W.M.13
-
9
-
-
78751580602
-
Dominant and dietresponsive groups of bacteria within the human colonic microbiota
-
Walker AW, Ince J, Duncan SH, Webster LM, Holtrop G, Ze X, Brown D, Stares MD, Scott P, Bergerat A, Louis P, McIntosh F, Johnstone AM, Lobley GE, Parkhill J, Flint HJ. 2011. Dominant and dietresponsive groups of bacteria within the human colonic microbiota. ISME J 5:220-230. http://dx.doi.org/10.1038/ismej.2010.118.
-
(2011)
ISME J
, vol.5
, pp. 220-230
-
-
Walker, A.W.1
Ince, J.2
Duncan, S.H.3
Webster, L.M.4
Holtrop, G.5
Ze, X.6
Brown, D.7
Stares, M.D.8
Scott, P.9
Bergerat, A.10
Louis, P.11
McIntosh, F.12
Johnstone, A.M.13
Lobley, G.E.14
Parkhill, J.15
Flint, H.J.16
-
10
-
-
84955613013
-
Comparative metabolomics in vegans and omnivores reveal constraints on diet-dependent gut microbiota metabolite production
-
Wu GD, Compher C, Chen EZ, Smith SA, Shah RD, Bittinger K, Chehoud C, Albenberg LG, Nessel L, Gilroy E, Star J, Weljie AM, Flint HJ, Metz DC, Bennett MJ, Li H, Bushman FD, Lewis JD. 2016. Comparative metabolomics in vegans and omnivores reveal constraints on diet-dependent gut microbiota metabolite production. Gut 65:63-72. http://dx.doi.org/10.1136/gutjnl-2014-308209.
-
(2016)
Gut
, vol.65
, pp. 63-72
-
-
Wu, G.D.1
Compher, C.2
Chen, E.Z.3
Smith, S.A.4
Shah, R.D.5
Bittinger, K.6
Chehoud, C.7
Albenberg, L.G.8
Nessel, L.9
Gilroy, E.10
Star, J.11
Weljie, A.M.12
Flint, H.J.13
Metz, D.C.14
Bennett, M.J.15
Li, H.16
Bushman, F.D.17
Lewis, J.D.18
-
11
-
-
84883057637
-
Dietary intervention impact on gut microbial gene richness
-
ANR MicroObes Consortium
-
Cotillard A, Kennedy SP, Kong LC, Prifti E, Pons N, Le Chatelier E, Almeida M, Quinquis B, Levenez F, Galleron N, Gougis S, Rizkalla S, Batto JM, Renault P, ANR MicroObes Consortium, Doré J, Zucker JD, Clément K, Ehrlich SD. 2013. Dietary intervention impact on gut microbial gene richness. Nature 500:585-588. http://dx.doi.org/10.1038/nature12480.
-
(2013)
Nature
, vol.500
, pp. 585-588
-
-
Cotillard, A.1
Kennedy, S.P.2
Kong, L.C.3
Prifti, E.4
Pons, N.5
Le Chatelier, E.6
Almeida, M.7
Quinquis, B.8
Levenez, F.9
Galleron, N.10
Gougis, S.11
Rizkalla, S.12
Batto, J.M.13
Renault, P.14
Doré, J.15
Zucker, J.D.16
Clément, K.17
Ehrlich, S.D.18
-
12
-
-
84866146940
-
Diversity, stability and resilience of the human gut microbiota
-
Lozupone CA, Stombaugh JI, Gordon JI, Jansson JK, Knight R. 2012. Diversity, stability and resilience of the human gut microbiota. Nature 489:220-230. http://dx.doi.org/10.1038/nature11550.
-
(2012)
Nature
, vol.489
, pp. 220-230
-
-
Lozupone, C.A.1
Stombaugh, J.I.2
Gordon, J.I.3
Jansson, J.K.4
Knight, R.5
-
13
-
-
84862276328
-
Structure, function and diversity of the healthy human microbiome
-
The Human Microbiome Project Consortium
-
The Human Microbiome Project Consortium. 2012. Structure, function and diversity of the healthy human microbiome. Nature 486:207-214. http://dx.doi.org/10.1038/nature11234.
-
(2012)
Nature
, vol.486
, pp. 207-214
-
-
-
14
-
-
84884671077
-
A metabolomic view of how the human gut microbiota impacts the host metabolome using humanized and gnotobiotic mice
-
Marcobal A, Kashyap PC, Nelson TA, Aronov PA, Donia MS, Spormann A, Fischbach MA, Sonnenburg JL. 2013. A metabolomic view of how the human gut microbiota impacts the host metabolome using humanized and gnotobiotic mice. ISME J 7:1933-1943. http://dx.doi.org/10.1038/ismej.2013.89.
-
(2013)
ISME J
, vol.7
, pp. 1933-1943
-
-
Marcobal, A.1
Kashyap, P.C.2
Nelson, T.A.3
Aronov, P.A.4
Donia, M.S.5
Spormann, A.6
Fischbach, M.A.7
Sonnenburg, J.L.8
-
15
-
-
77952243141
-
QIIME allows analysis of high-throughput community sequencing data
-
Caporaso JG, Kuczynski J, Stombaugh J, Bittinger K, Bushman FD, Costello EK, Fierer N, Peña AG, Goodrich JK, Gordon JI, Huttley GA, Kelley ST, Knights D, Koenig JE, Ley RE, Lozupone CA, McDonald D, Muegge BD, Pirrung M, Reeder J, Sevinsky JR, Turnbaugh PJ, Walters WA, Widmann J, Yatsunenko T, Zaneveld J, Knight R. 2010. QIIME allows analysis of high-throughput community sequencing data. Nat Methods 7:335-336. http://dx.doi.org/10.1038/nmeth.f.303.
-
(2010)
Nat Methods
, vol.7
, pp. 335-336
-
-
Caporaso, J.G.1
Kuczynski, J.2
Stombaugh, J.3
Bittinger, K.4
Bushman, F.D.5
Costello, E.K.6
Fierer, N.7
Peña, A.G.8
Goodrich, J.K.9
Gordon, J.I.10
Huttley, G.A.11
Kelley, S.T.12
Knights, D.13
Koenig, J.E.14
Ley, R.E.15
Lozupone, C.A.16
McDonald, D.17
Muegge, B.D.18
Pirrung, M.19
Reeder, J.20
Sevinsky, J.R.21
Turnbaugh, P.J.22
Walters, W.A.23
Widmann, J.24
Yatsunenko, T.25
Zaneveld, J.26
Knight, R.27
more..
-
16
-
-
77950669604
-
The effect of diet on the human gut microbiome: A metagenomic analysis in humanized gnotobiotic mice
-
Turnbaugh PJ, Ridaura VK, Faith JJ, Rey FE, Knight R, Gordon JI. 2009. The effect of diet on the human gut microbiome: a metagenomic analysis in humanized gnotobiotic mice. Sci Transl Med 1:6ra14. http://dx.doi.org/10.1126/scitranslmed.3000322.
-
(2009)
Sci Transl Med
, vol.1
, pp. 6ra14
-
-
Turnbaugh, P.J.1
Ridaura, V.K.2
Faith, J.J.3
Rey, F.E.4
Knight, R.5
Gordon, J.I.6
-
17
-
-
84885711264
-
Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota
-
Kashyap PC, Marcobal A, Ursell LK, Smits SA, Sonnenburg ED, Costello EK, Higginbottom SK, Domino SE, Holmes SP, Relman DA, Knight R, Gordon JI, Sonnenburg JL. 2013. Genetically dictated change in host mucus carbohydrate landscape exerts a diet-dependent effect on the gut microbiota. Proc Natl Acad Sci U S A 110:17059-17064. http://dx.doi.org/10.1073/pnas.1306070110.
-
(2013)
Proc Natl Acad Sci U S A
, vol.110
, pp. 17059-17064
-
-
Kashyap, P.C.1
Marcobal, A.2
Ursell, L.K.3
Smits, S.A.4
Sonnenburg, E.D.5
Costello, E.K.6
Higginbottom, S.K.7
Domino, S.E.8
Holmes, S.P.9
Relman, D.A.10
Knight, R.11
Gordon, J.I.12
Sonnenburg, J.L.13
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