Diversity in genetic structure and chemotype composition of Fusarium graminearum sensu stricto populations causing wheat head blight in individual fields in Germany

European Journal of Plant Pathology

Volumn 131, Issue 1, 2011, Pages 39-48

  Talas, Firas ^a,b   Parzies, Heiko K ^a   Miedaner, Thomas ^a  

^a UNIVERSITY OF HOHENHEIM   (Germany)

^b National Commission of Biotechnology (NCBT)   (Syrian Arab Republic)

Author keywords

DON; Fusarium head blight; Gene flow; Mycotoxin; Population genetics

Indexed keywords

DOMINANCE; FUNGAL DISEASE; FUNGUS; GENE FLOW; GENETIC MARKER; GENETIC STRUCTURE; GENETIC VARIATION; GENOTYPE; GEOGRAPHICAL DISTRIBUTION; POLYMERASE CHAIN REACTION; TOXIN; VARIANCE ANALYSIS; WHEAT;

GERMANY;

FUSARIUM; GIBBERELLA ZEAE; TRITICUM AESTIVUM;

EID: 85027957988     PISSN: 09291873     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10658-011-9785-3     Document Type: Article

References (48)

1. Agrios, G. N. (2004). Plant pathology (5th ed., 922 pp.). San Diego, USA: Elsevier Press.
2. Chandler, E. A., Duncan, R. S., Thomsett, M. A., & Nicholson, P. (2003). Development of PCR assays to Tri7 and Tri13 trichothecene biosynthetic genes and characterisation of chemotypes of Fusarium graminearum, Fusarium culmorum and Fusarium cerealis. Physiological and Molecular Plant Pathology, 62, 355-367.
3. Chen, Y., & Zhou, M. G. (2009). Sexual recombination of carbendazim resistance in Fusarium graminearum under field conditions. Pest Management Science, 65, 398-403.
4. Demeke, T., Clear, R. M., Patrick, S. K., & Gaba, D. (2004). Species-specific PCR -based assays for the detection of Fusarium species and a comparison with the whole seed agar plate method and trichothecene analysis. International Journal of Food Microbiology, 103, 271-284.
5. Excoffier, L., & Lischer, H. E. L. (2010). Arlequin suite ver. 3. 5: a new series of perform population genetics analyses under Linux and Windows. Molecular Ecology Resources, 10, 564-567.
6. Gale, L. R., Bryant, J. D., Calvo, S., Giese, H., Katan, T., O'Donnell, K., et al. (2005). Chromosome complement of the fungal plant pathogen Fusarium graminearum based on genetic and physical mapping and cytological observations. Genetics, 171, 985-1001.
7. Gale, L. R., Ward, T. J., Balmas, V., & Kistler, H. C. (2007). Population subdivision of Fusarium graminearum sensu stricto in the Upper Midwestern United States. Phytopathology, 97, 1434-1439.
8. Gale, L. R., Harrison, S. A., Ward, T. J., O'Donnell, K., Milus, E. A., Gale, S. W., et al. (2011). Nivalenol type populations of Fusarium graminearum and F. asiaticum are prevalent on wheat in southern Louisiana. Phytopathology, 101, 124-134.
9. Giraud, T., Fournier, E., Vautrin, D., Solignac, M., Vercken, E., Bakan, B., et al. (2002). Isolation of eight polymorphic microsatellite loci using an enrichment protocol, in the phytopathogenic fungus Fusarium culmorum. Molecular Ecology Notes, 2, 121-123.
10. Guo, X. W., Fernando, W. G. D., & Seow-Brock, H. Y. (2008). Population structure chemotype diversity and potential chemotype shifting of Fusarium graminearum in wheat fields of Manitoba. Plant Disease, 92, 756-762.
11. Hartl, D. L., & Clark, A. G. (2007). Principles of population genetics (4th ed., 652 pp.). Minnesota, USA: Sinauer Associates Press.
12. Hedrick, P. W. (2000). Genetics of populations (2nd ed.). Basic Book: Boston.
13. Hoffman, C. S., & Winston, F. (1987). A ten-minute DNA preparation from yeast efficiently releases autonomous plasmids for transformation of Escherichia coli. Gene, 57, 267-272.
14. Jennings, P., Coates, M. E., Walsh, K., Turner, J. A., & Nicholson, P. (2004). Determination of deoxynivalenol and nivalenol producing chemotypes of Fusarium graminearum isolated from wheat crops in England and Wales. Plant Pathology, 53, 643-652.
15. Karugia, G. W., Suga, H., Gale, L. R., Nakajima, T., Tomimura, K., & Hyakumachi, M. (2009). Population structure of Fusarium graminearum species complex from a single Japanese wheat field sampled in two consecutive years. Plant Disease, 93, 170-174.
16. Knoll, S., Mulfinger, S., Niessen, L., & Vogel, F. (2002). Rapid preparation of Fusarium DNA from cereals for diagnostic PCR using sonification and an extraction kit. Plant Pathology, 51, 728-734.
17. Leslie, J. F., & Summerell, B. A. (2006). The Fusarium laboratory manual (388 pp.). Lowa, USA: Blackwell publishing.
18. Lowe, A., Harris, S., & Ashton, P. (2005). Ecological genetics. Design, analysis, and application (344 pp.). Minnesota, USA: Blackwell Publishing.
19. Mantel, N. (1967). The detection of disease clustering and a generalized regression approach. Cancer Research, 27, 209-220.
20. McDonald, B. A., & Linde, C. (2002). Pathogen population genetics, evolutionary potential, and durable resistance. Annual Review of Phytopathology, 40, 349-379.
21. McDonald, M. V., & Chapman, R. (1997). The incidence of Fusarium moniliforme on maize from Central America, Africa and Asia during 1992-1995. Plant Pathology, 46, 112-125.
22. Miedaner, T., Reinbrecht, C., & Schilling, A. G. (2000). Association among aggressiveness, fungal colonization, and mycotoxin production of 26 isolates of Fusarium graminearum in winter rye head blight. Journal of Plant Disease and Production, 107, 124-134.
23. Miedaner, T., Reinbrecht, C., Lauber, U., Schollenberger, M., & Geiger, H. H. (2001). Effects of genotype and genotype x environment on deoxynivalenol accumulation and resistance to Fusarium head blight in rye, triticale, and wheat. Plant Breeding, 120, 97-105.
24. Miedaner, T., Cumagun, C. J. R., & Chakraborty, S. (2008). Population genetics of three important head blight pathogens Fusarium graminearum, F. pseudograminearum and F. culmorum. Journal of Phytopathology, 156, 129-139.
25. Miller, J. D., Greenhalgh, R., Wang, Y. Z., & Lu, M. (1991). Trichothecene chemotypes of there Fusarium species. Mycologia, 82, 121-130.
26. Naef, A., & Défago, G. (2006). Population structure of plant-pathogenic Fusarium species in overwintered stalk residues from Bt-transformed and non-transformed maize crops. European Journal of Plant Pathology, 116, 129-143.
27. Nelson, P. E., Toussoun, T. A., & Marasas, W. F. O. (1983). Fusarium species: an illustrated manual for identification (193 pp.). Pennsylvania, USA: University Park, Pennsylvania State University.
28. Nicholson, P., Simpson, D. R., Wilson, G., Rezanoor, H. N., Lees, A. K., Parry, D. W., et al. (1998). Detection and quantification of Fusarium culmorum and Fusarium graminearum in cereals using PCR assays. Physiological and Molecular Plant Pathology, 53, 17-37.
29. Nicholson, P., Chandler, E., Draeger, R. C., Gosman, N. E., Dimpson, D. R., Thomsett, M., et al. (2003). Molecular tools to study epidemiology and toxicology of fusarium head blight of cereals. European Journal of Plant Pathology, 109, 691-703.
30. O'Donnell, K., Ward, T. J., Geiser, D. M., Kistler, H. C., & Aoki, T. (2004). Genealogical concordance between the mating type locus and seven other nuclear genes supports formal recognition of nine phylogenetically distinct species within the Fusarium graminearum clade. Fungal Genetics and Biology, 41, 600-623.
31. O'Donnell, K., Ward, T. J., Aberra, D., Kistler, H. C., Aoki, T., Orwig, N., et al. (2008). Multilocus genotyping and molecular phylogenetics resolve a novel head blight pathogen within the Fusarium graminearum species complex from Ethiopia. Fungal Genetics and Biology, 45, 1514-1522.
32. Peakall, R., & Smouse, P. E. (2006). Genalex 6: genetic analysis in Excel. Population genetics software for teaching and research. Molecular Ecology Notes, 6, 288-295.
33. Schmale, D. G., Leslie, J. F., Zeller, K. A., Saleh, A. A., Shields, E. J., & Bergstrom, G. C. (2006). Genetic structure of atmospheric populations of Gibberella zeae. Phytopathology, 96, 1021-1026.
34. Shaner, G. (2003). Epidemiology of Fusarium Head Blight of small grain cereals in North America. (pp. 84-119). In K. J. Leonard, & W. R. Bushnell (Eds.), Fusarium Head Blight of Wheat and Barley (512 pp.). St. Paul, Minnesota, USA: APS Press.
35. Stack, R. W. (2003). History of Fusarium head blight with emphasis on North America. (pp. 1-34). In K. J. Leonard, & W. R. Bushnell (Eds.), Fusarium Head Blight of Wheat and Barley (512 pp.). St. Paul, Minnesota, USA: APS Press.
36. Suga, H., Gale, L. R., & Kistler, H. C. (2004). Development of VNTR markers for two Fusarium graminearum clade spcies. Molecular and Ecology Notes, 4, 468-470.
37. Suga, H., Karugia, G. W., Ward, T., Gale, L. R., Tominura, K., Nakajima, T., et al. (2008). Molecular characterization of the Fusarium graminearum species complex in Japan. Phytopathology, 98, 159-166.
38. Sutton, J. C. (1982). Epidemiology of wheat head blight and maize ear rot caused by Fusarium graminearum. Canadian Journal of Plant Pathology, 4, 195-209.
39. Ward, T. J., Bielawski, J. P., Kistler, H. C., Sullivan, E., & O'Donnell, K. (2002). Ancestral polymorphism and adaptive evolution in the trichothecene mycotoxin gene cluster of phytopathogenic Fusarium. Proceedings of the National Academy of Sciences of the United States of America, 99, 9278-9283.
40. Ward, T. J., Clear, R. M., Rooney, A. P., O'Donnell, K., Gaba, D., Patrick, S., et al. (2008). An adaptive evolutionary shift in Fusarium head blight pathogen populations is driving the rapid spread of more toxigenic Fusarium graminearum in North America. Fungal Genetics and Biology, 45, 473-484.
41. Windels, C. E., & Kommedahl, T. (1984). Late season colonization and survival of Fusarium graminearum group II in cornstalks in Minnesota. Plant Disease, 68, 791-793.
42. Xu, X. M., Nicholson, P., Thomsett, M. A., Simpson, D., Cooke, B. M., Doohan, F. M., et al. (2008). Relationship between the fungal complex causing Fusarium head blight of wheat and environmental conditions. Phytopathology, 98, 69-78.
43. Yang, L., van der Lee, T., Yang, X., Yu, D., & Waalwijk, C. (2008). Fusarium populations on Chinese barley show a dramatic gradient in mycotoxin profiles. Phytopathology, 98, 719-727.
44. Yli-Mattila, T., Gagkeva, T., Ward, T., Aoki, T., Kistler, H. C., & O'Donnell, K. (2009). A novel Asian clade within the Fusarium graminearum species complex includes a newly discovered cereal head blight pathogen from Russian Far East. Mycologia, 101, 841-852.
45. Zeller, K. A., Bowden, R. L., & Leslie, J. F. (2003). Diversity of epidemic populations of Gibberella zeae from small quadrants in Kansas and North Dakota. Phytopathology, 93, 874-880.
46. Zeller, K. A., Bowden, R. L., & Leslie, J. F. (2004). Population differentiation and recombination in wheat scab populations of Gibberella zeae from the United States. Molecular Ecology, 13, 563-571.
47. Zhang, Z., Zhang, H., van der Lee, T., Chen, W. Q., Arens, P., Xu, J., et al. (2010). Geographical substructure of Fusarium asiaticum isolates collected from barley in China. European Journal of Plant Pathology, 127, 239-248.
48. Zhang, H., Zhang, Z., van der Lee, T., Xu, J., Yang, L., Yu, D., et al. (2010). Population genetic analyses of Fusarium asiaticum populations from barley suggest a recent shift favoring 3ADON producers in southern China. Phytopathology, 100, 328-336.